iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121425

Ensembl Protein ID

EOY25974

UniProt Accession

A0A061GG03; A0A061GG03_THECC

Genbank Protein ID

EOY25974.1

Protein Name

Zinc finger (C3HC4-type RING finger) family protein

Genbank Nucleotide ID

CM001884

Gene Name

TCM_027345

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_027345	EOY25974	EOY25974

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.00e-06	27.4	175	215
UBD/ZnF/ZnF_UBP	6.50e-26	91.3	225	285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle++     g l++ C+H fh +C+ kw        +  +CP+Cr
   Q: 175  CPVCLERLdqdTSGILTTICNHSFHCSCISKW--------TDSSCPVCR 215
           ********54333477888*************........8889****8 PP

UBD/ZnF/ZnF_UBP

   S: 2    kcsvcdktenlWlcLtcgsvgCGRyvegHalkHyeetqhplvlslstlsvycYacddyvhr 62
           +c +c++ enlW+c+ cg+vgCGRy+ gHa+ H++etqh+++l+l+t++v++Y++d+yvhr
   Q: 225  TCFICQTSENLWICVLCGFVGCGRYKRGHAIIHWKETQHCYSLELETQRVWDYVGDNYVHR 285
           699********************************************************96 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSSSSSTVTG DDKFRQSETV IAGDLSAPNM STEAISFSSG NPRIEETRGV MHLFSNDAVS 60
TLPVERKPLV CVLGVPNHMT YADFCQFCAS FIHHILEMRI VRNDGMEDRY SVLIRFDSQD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTCTGAAA CCCAAAAAAT TTAACGTTAA TGAAACAAAG CCATGTCATC AAGCTCAAGC 60
ACAGTCACCG GGGACGATAA GTTCCGGCAA TCGGAGACGG TCATCGCCGG CGATCTCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011422--BRAP2
IPR033273--BRIZ1
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50089--ZF_RING_2
PS50271--ZF_UBP

Pfam

PF07576--BRAP2
PF13639--zf-RING_2
PF02148--zf-UBP

SMART

SM00184--RING
SM00290--ZnF_UBP

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0003676--F:nucleic acid binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0010029--P:regulation of seed germination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002229	Ailuropoda melanoleuca	37.79	6.00e-89	320.00
IUUC-Atr-002785	Amborella trichopoda	65.15	2.00e-178	617.00
IUUC-Apl-004048	Anas platyrhynchos	38.83	3.00e-90	325.00
IUUC-Aca-005133	Anolis carolinensis	38.06	1.00e-86	313.00
IUUC-Aly-006306	Arabidopsis lyrata	68.93	0.00e+00	632.00
IUUC-Ath-007604	Arabidopsis thaliana	67.27	0.00e+00	646.00
IUUC-Ago-007905	Ashbya gossypii	31.45	1.00e-63	236.00
IUUC-Acl-008310	Aspergillus clavatus	36.98	2.00e-61	229.00
IUUC-Afl-008497	Aspergillus flavus	37.46	4.00e-57	214.00
IUUC-Afu-008830	Aspergillus fumigatus	37.09	8.00e-62	231.00
IUUC-Ani-009485	Aspergillus nidulans	36.69	7.00e-63	233.00
IUUC-Ang-009603	Aspergillus niger	37.54	4.00e-65	241.00
IUUC-Aor-009935	Aspergillus oryzae	36.97	6.00e-61	228.00
IUUC-Ate-010485	Aspergillus terreus	34.80	3.00e-64	238.00
IUUC-Ame-011516	Astyanax mexicanus	39.23	5.00e-78	284.00
IUUC-Bgr-011985	Blumeria graminis	37.46	4.00e-50	192.00
IUUC-Bta-013203	Bos taurus	38.28	7.00e-90	323.00
IUUC-Bci-013788	Botrytis cinerea	35.47	1.00e-55	210.00
IUUC-Bdi-014763	Brachypodium distachyon	60.83	2.00e-157	547.00
IUUC-Bol-015518	Brassica oleracea	64.30	0.00e+00	659.00
IUUC-Bra-017435	Brassica rapa	64.79	0.00e+00	666.00
IUUC-Cel-018194	Caenorhabditis elegans	33.33	1.00e-69	256.00
IUUC-Cja-018948	Callithrix jacchus	38.08	1.00e-86	313.00
IUUC-Cfa-020377	Canis familiaris	38.08	3.00e-89	322.00
IUUC-Cpo-021930	Cavia porcellus	37.87	5.00e-86	310.00
IUUC-Cre-022571	Chlamydomonas reinhardtii	47.33	1.00e-67	248.00
IUUC-Csa-023554	Chlorocebus sabaeus	40.35	1.00e-83	303.00
IUUC-Cho-025045	Choloepus hoffmanni	36.73	1.00e-23	103.00
IUUC-Cin-025326	Ciona intestinalis	34.68	1.00e-69	256.00
IUUC-Csv-026232	Ciona savignyi	35.28	2.00e-76	278.00
IUUC-Cgl-026587	Colletotrichum gloeosporioides	30.84	5.00e-60	224.00
IUUC-Cne-026980	Cryptococcus neoformans	39.15	4.00e-52	198.00
IUUC-Cme-027262	Cyanidioschyzon merolae	31.10	3.00e-58	219.00
IUUC-Dre-028521	Danio rerio	37.53	2.00e-83	302.00
IUUC-Dno-029291	Dasypus novemcinctus	39.24	3.00e-88	318.00
IUUC-Dor-030231	Dipodomys ordii	35.65	1.00e-73	269.00
IUUC-Dme-032095	Drosophila melanogaster	34.73	3.00e-74	271.00
IUUC-Ete-032227	Echinops telfairi	38.66	2.00e-55	209.00
IUUC-Eca-034404	Equus caballus	37.87	8.00e-89	320.00
IUUC-Eeu-035030	Erinaceus europaeus	38.39	1.00e-38	154.00
IUUC-Fca-035428	Felis catus	37.79	8.00e-89	320.00
IUUC-Fal-037435	Ficedula albicollis	39.44	7.00e-90	323.00
IUUC-Fox-037733	Fusarium oxysporum	32.35	7.00e-60	224.00
IUUC-Fso-038427	Fusarium solani	33.25	6.00e-58	218.00
IUUC-Gmo-038817	Gadus morhua	38.48	3.00e-83	301.00
IUUC-Ggr-039949	Gaeumannomyces graminis	34.81	4.00e-58	218.00
IUUC-Gga-040929	Gallus gallus	38.83	3.00e-90	324.00
IUUC-Gac-041893	Gasterosteus aculeatus	38.46	2.00e-84	305.00
IUUC-Gma-043119	Glycine max	72.92	0.00e+00	688.00
IUUC-Ggo-045106	Gorilla gorilla	41.58	2.00e-82	298.00
IUUC-Hsa-045685	Homo sapiens	38.08	3.00e-89	322.00
IUUC-Itr-048406	Ictidomys tridecemlineatus	37.87	7.00e-86	310.00
IUUC-Kpa-049175	Komagataella pastoris	32.63	3.00e-63	235.00
IUUC-Lch-050408	Latimeria chalumnae	39.60	8.00e-87	313.00
IUUC-Lpe-050998	Leersia perrieri	56.56	3.00e-121	427.00
IUUC-Loc-052160	Lepisosteus oculatus	31.78	5.00e-52	198.00
IUUC-Laf-053497	Loxodonta africana	37.71	1.00e-88	319.00
IUUC-Mcc-055381	Macaca mulatta	37.87	6.00e-89	320.00
IUUC-Meu-056402	Macropus eugenii	31.55	5.00e-40	158.00
IUUC-Mor-057002	Magnaporthe oryzae	39.24	7.00e-60	224.00
IUUC-Mpo-057508	Magnaporthe poae	34.16	3.00e-57	216.00
IUUC-Mtr-058619	Medicago truncatula	66.75	7.00e-157	545.00
IUUC-Mla-058901	Melampsora laricipopulina	33.33	2.00e-61	229.00
IUUC-Mga-059667	Meleagris gallopavo	39.02	9.00e-90	323.00
IUUC-Mvi-060229	Microbotryum violaceum	30.52	4.00e-56	212.00
IUUC-Mmr-060881	Microcebus murinus	38.89	8.00e-77	280.00
IUUC-Mdo-062573	Monodelphis domestica	38.58	2.00e-84	306.00
IUUC-Mmu-063656	Mus musculus	38.24	3.00e-88	318.00
IUUC-Mac-065512	Musa acuminata	61.30	1.00e-171	595.00
IUUC-Mpu-065816	Mustela putorius furo	38.08	2.00e-89	322.00
IUUC-Mlu-067225	Myotis lucifugus	37.79	9.00e-90	323.00
IUUC-Nfi-068534	Neosartorya fischeri	36.39	8.00e-62	231.00
IUUC-Ncr-068801	Neurospora crassa	32.69	1.00e-55	211.00
IUUC-Nle-069258	Nomascus leucogenys	40.60	8.00e-85	306.00
IUUC-Opr-070877	Ochotona princeps	37.31	1.00e-84	306.00
IUUC-Ont-072141	Oreochromis niloticus	38.06	2.00e-83	302.00
IUUC-Oan-072961	Ornithorhynchus anatinus	38.20	2.00e-86	312.00
IUUC-Ocu-074020	Oryctolagus cuniculus	41.60	2.00e-82	300.00
IUUC-Oba-075833	Oryza barthii	55.15	9.00e-122	429.00
IUUC-Obr-076840	Oryza brachyantha	61.97	9.00e-154	535.00
IUUC-Ogl-077880	Oryza glaberrima	61.20	1.00e-145	508.00
IUUC-Ogu-077971	Oryza glumaepatula	55.32	2.00e-120	425.00
IUUC-Oin-079200	Oryza indica	61.20	8.00e-146	509.00
IUUC-Oni-082506	Oryza nivara	55.32	4.00e-120	424.00
IUUC-Opu-083422	Oryza punctata	54.57	2.00e-122	431.00
IUUC-Oru-085187	Oryza rufipogon	55.32	4.00e-120	424.00
IUUC-Ola-087390	Oryzias latipes	40.00	2.00e-84	305.00
IUUC-Olu-087694	Ostreococcus lucimarinus	35.49	1.00e-71	262.00
IUUC-Oga-088612	Otolemur garnettii	37.87	4.00e-85	308.00
IUUC-Oar-089988	Ovis aries	38.20	9.00e-88	317.00
IUUC-Ptr-090637	Pan troglodytes	38.08	2.00e-89	322.00
IUUC-Pan-092506	Papio anubis	37.87	2.00e-89	322.00
IUUC-Psi-093026	Pelodiscus sinensis	38.31	2.00e-84	305.00
IUUC-Ppa-095731	Physcomitrella patens	55.81	4.00e-146	510.00
IUUC-Pfo-096725	Poecilia formosa	40.85	2.00e-84	306.00
IUUC-Pab-098413	Pongo abelii	37.87	4.00e-68	251.00
IUUC-Pop-099538	Populus trichocarpa	80.51	0.00e+00	698.00
IUUC-Pca-100130	Procavia capensis	38.76	6.00e-68	251.00
IUUC-Ppe-101843	Prunus persica	76.40	0.00e+00	703.00
IUUC-Pva-102752	Pteropus vampyrus	38.08	1.00e-89	323.00
IUUC-Pgr-103478	Puccinia graminis	35.54	7.00e-66	244.00
IUUC-Ptt-103921	Puccinia triticina	35.64	6.00e-64	238.00
IUUC-Rno-106037	Rattus norvegicus	49.06	2.00e-76	279.00
IUUC-Sce-106310	Saccharomyces cerevisiae	31.28	1.00e-58	220.00
IUUC-Sha-106752	Sarcophilus harrisii	39.78	1.00e-85	310.00
IUUC-Sja-107665	Schizosaccharomyces japonicus	34.89	8.00e-71	260.00
IUUC-Spo-108042	Schizosaccharomyces pombe	36.02	3.00e-67	248.00
IUUC-Ssl-108504	Sclerotinia sclerotiorum	36.75	2.00e-57	216.00
IUUC-Smo-109399	Selaginella moellendorffii	51.80	9.00e-134	469.00
IUUC-Sit-110251	Setaria italica	62.39	3.00e-160	557.00
IUUC-Sly-111563	Solanum lycopersicum	69.86	2.00e-171	594.00
IUUC-Stu-112294	Solanum tuberosum	68.20	8.00e-177	612.00
IUUC-Sbi-113915	Sorghum bicolor	61.47	2.00e-157	547.00
IUUC-Sre-114897	Sporisorium reilianum	41.03	3.00e-61	229.00
IUUC-Ssc-115369	Sus scrofa	47.47	5.00e-52	196.00
IUUC-Tgu-116710	Taeniopygia guttata	39.04	5.00e-91	327.00
IUUC-Tru-117941	Takifugu rubripes	38.95	5.00e-83	301.00
IUUC-Tsy-118902	Tarsius syrichta	60.67	6.00e-32	130.00
IUUC-Tni-120587	Tetraodon nigroviridis	37.45	1.00e-85	309.00
IUUC-Tre-121874	Trichoderma reesei	33.10	5.00e-64	238.00
IUUC-Tae-123517	Triticum aestivum	61.97	2.00e-157	548.00
IUUC-Tur-126467	Triticum urartu	54.66	1.00e-115	408.00
IUUC-Tme-127096	Tuber melanosporum	33.53	9.00e-63	233.00
IUUC-Tbe-128012	Tupaia belangeri	38.20	1.00e-85	309.00
IUUC-Ttr-128388	Tursiops truncatus	37.87	6.00e-89	320.00
IUUC-Uma-129610	Ustilago maydis	39.86	2.00e-56	213.00
IUUC-Vda-129830	Verticillium dahliae	30.71	1.00e-55	210.00
IUUC-Vpa-130171	Vicugna pacos	38.28	3.00e-88	318.00
IUUC-Vvi-131063	Vitis vinifera	67.94	1.00e-176	611.00
IUUC-Xtr-132313	Xenopus tropicalis	39.37	4.00e-89	321.00
IUUC-Xma-133303	Xiphophorus maculatus	39.66	1.00e-84	306.00
IUUC-Yli-134669	Yarrowia lipolytica	31.70	2.00e-62	232.00
IUUC-Zma-135783	Zea mays	60.36	1.00e-152	532.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence