iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015135

Ensembl Protein ID

Bo6g052570.1

UniProt Accession

A0A0D3CSH4; A0A0D3CSH4_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo6g052570	Bo6g052570.1	Bo6g052570.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.10e-23	82.0	435	500

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqa 67
           +p+ f CpI+ e+M+dP+ +++G ty++++I kw+++g+ t+P+t+ +l +++lvPn +lr+ iq+
   Q: 435  PPPSFYCPITQEVMKDPHFAADGFTYEAEAIDKWFSTGHDTSPMTNLKLPHRNLVPNRALRSAIQD 500
           799*************************************************************96 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MDSRRSLAQM NSQTSYGVVG NSNEEKRVIE KARSLLNWLT ERNFDKIKDE IVQTIIRASP 60
SAFVIKSLVC FILDMAMVDS TANVLFARLS VHLFHSLPPF PTADCHGEIT TFERLFLCKC 120

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Nucleotide Sequence
(Fasta)

ATGGATTCTC GCAGGAGTTT GGCCCAGGTA ATTAATTCTC GCTACTCACA TCATCATTTT 60
TTCTTCTTAT TTCTTTTCAT CGATTATAAA ACTTCATCTG CATTTGATTG TATGTCGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR016024--ARM-type_fold
IPR016021--MIF4-like
IPR003890--MIF4G-like_typ-3
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF02854--MIF4G
PF04564--U-box

SMART

SM00543--MIF4G
SM00504--Ubox

Gene Ontology

GO:0003723--F:RNA binding
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006502	Arabidopsis lyrata	66.51	1.00e-162	565.00
IUUC-Ath-007386	Arabidopsis thaliana	65.41	1.00e-155	542.00
IUUC-Bra-017828	Brassica rapa	95.76	0.00e+00	981.00
IUUC-Csv-026279	Ciona savignyi	26.88	5.10e-02	32.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence