iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057936

Ensembl Protein ID

KEH20352

UniProt Accession

A0A072TSJ0; A0A072TSJ0_MEDTR

Genbank Protein ID

KEH20352.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g073335

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g073335	KEH20352	KEH20352

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-08	35.6	573	604

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           + +++   s+++l++Gsd g + v+++++ +l
   Q: 573  IISVNIdhSSKHLAVGSDQGHVSVYNMDDLTL 604
           56777785559***************988665 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MFVKKLVEKA SIKKPGGNSI EGLKASDVDP RVVFHQGIPS GGAKFAYDSI QKILALSTKD 60
GRIKLYGKDN AQALLDSSEP LPSKFLQFIQ NQGILLNVTS NNHIEVWDIE KKILSDVYVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTACATATAT CCAATTACTA GCTTAGTTGA TTTTAAATGT ACCCTTTTGT ATGTATCAGA 60
AGCATATATT ATAAATAAAC AATTGTCCCT TCTCACACCC CAAAGTAACC ATCACAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013905--Lgl_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF08596--Lgl_C

SMART

SM00320--WD40

KEGG

mtr:MTR_8g073335

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001923	Ailuropoda melanoleuca	25.11	1.00e-19	92.00
IUUC-Aca-004796	Anolis carolinensis	26.20	1.00e-19	91.70
IUUC-Aly-005994	Arabidopsis lyrata	52.48	0.00e+00	1030.00
IUUC-Ath-007593	Arabidopsis thaliana	51.82	0.00e+00	980.00
IUUC-Ame-010663	Astyanax mexicanus	24.68	1.00e-19	91.70
IUUC-Bta-013413	Bos taurus	25.11	9.00e-20	92.00
IUUC-Bol-015893	Brassica oleracea	51.97	0.00e+00	983.00
IUUC-Bra-018080	Brassica rapa	44.58	0.00e+00	754.00
IUUC-Cel-018519	Caenorhabditis elegans	26.37	5.00e-10	60.10
IUUC-Cja-018984	Callithrix jacchus	24.68	1.00e-19	91.70
IUUC-Cfa-021212	Canis familiaris	25.11	9.00e-20	92.00
IUUC-Cpo-021336	Cavia porcellus	24.43	5.00e-12	66.20
IUUC-Csa-023249	Chlorocebus sabaeus	25.11	1.00e-19	92.00
IUUC-Cho-025086	Choloepus hoffmanni	23.94	6.00e-08	52.80
IUUC-Cin-025731	Ciona intestinalis	26.14	1.00e-22	99.40
IUUC-Csv-026036	Ciona savignyi	22.79	2.00e-28	120.00
IUUC-Dre-027886	Danio rerio	25.97	2.00e-20	94.40
IUUC-Dno-029866	Dasypus novemcinctus	24.57	2.00e-17	84.70
IUUC-Dor-031024	Dipodomys ordii	25.11	9.00e-20	92.00
IUUC-Dme-031607	Drosophila melanogaster	22.31	1.00e-19	92.00
IUUC-Ete-032893	Echinops telfairi	25.11	7.00e-20	92.40
IUUC-Eeu-034943	Erinaceus europaeus	24.03	2.00e-17	84.30
IUUC-Fca-036249	Felis catus	25.11	1.00e-19	92.00
IUUC-Fal-036761	Ficedula albicollis	26.41	4.00e-20	93.20
IUUC-Gmo-038889	Gadus morhua	26.20	1.00e-18	88.60
IUUC-Gga-040415	Gallus gallus	25.97	7.00e-20	92.40
IUUC-Gac-041391	Gasterosteus aculeatus	24.89	2.00e-18	87.80
IUUC-Ggo-045391	Gorilla gorilla	25.11	9.00e-20	92.40
IUUC-Hsa-045903	Homo sapiens	25.11	9.00e-20	92.40
IUUC-Itr-048722	Ictidomys tridecemlineatus	27.22	1.00e-09	58.20
IUUC-Lpe-051019	Leersia perrieri	41.67	0.00e+00	708.00
IUUC-Loc-052677	Lepisosteus oculatus	25.33	2.00e-19	91.70
IUUC-Laf-053723	Loxodonta africana	25.22	1.00e-19	91.30
IUUC-Mcc-055526	Macaca mulatta	25.11	9.00e-20	92.00
IUUC-Mga-059965	Meleagris gallopavo	26.11	1.00e-12	68.60
IUUC-Mmr-061246	Microcebus murinus	25.11	8.00e-20	92.40
IUUC-Mdo-062626	Monodelphis domestica	26.41	8.00e-20	92.40
IUUC-Mmu-063848	Mus musculus	24.24	2.00e-19	90.90
IUUC-Mpu-065780	Mustela putorius furo	24.33	2.00e-18	86.30
IUUC-Mlu-067504	Myotis lucifugus	24.36	2.00e-19	91.30
IUUC-Nle-069640	Nomascus leucogenys	25.11	9.00e-20	92.40
IUUC-Opr-070681	Ochotona princeps	21.65	2.00e-14	74.70
IUUC-Ont-072051	Oreochromis niloticus	26.32	2.00e-19	91.70
IUUC-Oan-073349	Ornithorhynchus anatinus	24.37	3.00e-19	87.80
IUUC-Ocu-074803	Oryctolagus cuniculus	25.11	1.00e-19	92.00
IUUC-Oba-075817	Oryza barthii	41.94	0.00e+00	730.00
IUUC-Obr-076813	Oryza brachyantha	41.97	0.00e+00	743.00
IUUC-Ogl-077896	Oryza glaberrima	42.51	0.00e+00	750.00
IUUC-Ogu-078104	Oryza glumaepatula	40.62	3.00e-171	594.00
IUUC-Oin-079712	Oryza indica	42.94	0.00e+00	765.00
IUUC-Olo-081006	Oryza longistaminata	35.82	4.00e-87	315.00
IUUC-Ome-081753	Oryza meridionalis	41.64	0.00e+00	721.00
IUUC-Oni-082419	Oryza nivara	42.04	0.00e+00	733.00
IUUC-Opu-083377	Oryza punctata	42.45	0.00e+00	749.00
IUUC-Oru-085098	Oryza rufipogon	41.47	0.00e+00	713.00
IUUC-Osa-085420	Oryza sativa	42.75	0.00e+00	760.00
IUUC-Ola-087197	Oryzias latipes	24.72	1.00e-11	65.50
IUUC-Oga-088333	Otolemur garnettii	25.11	9.00e-20	92.00
IUUC-Oar-090222	Ovis aries	25.11	2.00e-18	87.80
IUUC-Ptr-091012	Pan troglodytes	25.11	9.00e-20	92.40
IUUC-Pan-091748	Papio anubis	25.43	8.00e-19	89.40
IUUC-Psi-093405	Pelodiscus sinensis	25.65	4.00e-19	90.10
IUUC-Pfo-096618	Poecilia formosa	25.76	1.00e-19	92.00
IUUC-Pab-098201	Pongo abelii	25.11	1.00e-19	92.00
IUUC-Pop-099380	Populus trichocarpa	60.36	0.00e+00	1176.00
IUUC-Pca-101111	Procavia capensis	24.81	2.00e-18	88.20
IUUC-Ppe-101373	Prunus persica	61.47	0.00e+00	1199.00
IUUC-Pva-102580	Pteropus vampyrus	22.94	2.00e-14	74.30
IUUC-Rno-106102	Rattus norvegicus	24.68	1.00e-19	91.70
IUUC-Sha-107086	Sarcophilus harrisii	24.41	2.00e-11	64.70
IUUC-Sly-111741	Solanum lycopersicum	54.01	0.00e+00	1079.00
IUUC-Sar-113007	Sorex araneus	24.26	1.00e-17	85.50
IUUC-Ssc-115307	Sus scrofa	25.54	6.00e-20	92.80
IUUC-Tgu-116507	Taeniopygia guttata	26.41	4.00e-20	93.20
IUUC-Tru-118038	Takifugu rubripes	26.41	1.00e-19	92.00
IUUC-Tsy-119133	Tarsius syrichta	26.34	5.00e-18	86.70
IUUC-Tni-120014	Tetraodon nigroviridis	26.41	2.00e-19	90.90
IUUC-Tae-125204	Triticum aestivum	42.92	0.00e+00	731.00
IUUC-Tbe-127510	Tupaia belangeri	23.93	3.00e-15	77.40
IUUC-Ttr-128804	Tursiops truncatus	24.68	9.00e-19	89.00
IUUC-Vpa-130524	Vicugna pacos	23.95	3.00e-17	84.00
IUUC-Xtr-132160	Xenopus tropicalis	25.00	3.00e-12	67.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence