• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Aly-006406
Ensembl Protein ID fgenesh2_kg.8__815__AT5G49430.1
UniProt Accession D7MNS0; D7MNS0_ARALL
Genbank Protein ID EFH41992.1
Protein Name Transducin family protein
Genbank Nucleotide ID GL348720
Gene Name ARALYDRAFT_494999
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.8__815__AT5G49430.1 fgenesh2_kg.8__815__AT5G49430.1 fgenesh2_kg.8__815__AT5G49430.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.80e-25 86.4 311 344
UBD/Beta-Prp 4.00e-43 148.4 222 484
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWD 29
    gHt+ vt++af ++ l+s+sdDgt+++WD
   Q: 311 GHTGAVTAIAFsprPGspYQLLSSSDDGTCRIWD 344
    8************9555356************** PP
   


   UBD/Beta-Prp

   S: 2    iktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw 79
    ik l+gh+ +v +++ +++++++tgs+d+ +kvw+++t +l+s ghe+ +t++ s++ +++++s+D +i+vw
   Q: 222 IKRLRGHRNAVYCAIL-DRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVW 298
    5678889998888655.59*******************************************99************** PP
   S: 80 dlstgkcvhtlkghedsvlslsfsp...sgdklvsGshdrtirvwdletgqclee..................tlsgh 136
    l +g +v++l+gh+ v++++fsp s + l+s s+d t r+wd + q ++++
   Q: 299 RLPDGLPVSVLRGHTGAVTAIAFSPrpgSPYQLLSSSDDGTCRIWDARGAQFAPRiyvprppspdgknsgpssSNAQQ 376
    *************************98777**********************999******************99999 PP
   S: 137 dgvvncvvvhpdgnllvsGslDrtvrlWdl............ktgkllrtltgghtdsvyslsfdsng.......... 192
    ++ + c +++ +g+++v+Gs D+ r++++ + + ++ l g h+++v+ ++f+
   Q: 377 SHQIFCCAFNANGSVFVTGSSDTLARVYSVwsanktntddpeQPNHEMDVLAG-HENDVNYVQFSGCAagskfsvtdy 453
    99*****************************9999999988544555555566.*********665555566666666 PP
   S: 193 ................kelvsgsldgtvklw 207
    +v++s+dg+ ++w
   Q: 454 skdenvpkfknswfchDNIVTCSRDGSAIIW 484
    677799999999***99************** PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MKPLNFSRKL PGNVQIPDPD IAQVVAPNID LDLREVYFLI LHLLSSGPCQ KTYALLRHEL 60
LEHELLPRRY HAWYSRSGLS SGDENDDGNS FPLNYTELAK RYSHVKKDHL VELLKQLVFV 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-006406|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCTCTTA GGAAAAATAC TCCAAAAGGC GATTCAGTTT CACTCCCTAT GAAGCCGTTG 60
AATTTCTCCA GAAAATTGCC AGGGAATGTG CAGATTCCAG ACCCTGATAT TGCTCAAGTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-006406|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50014--BROMODOMAIN_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00297--BROMO
SM00320--WD40

KEGG aly:ARALYDRAFT_494999
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001113 Aegilops tauschii 56.23 0.00e+00 860.00
IUUC-Aml-002299 Ailuropoda melanoleuca 32.40 7.00e-72 265.00
IUUC-Atr-002600 Amborella trichopoda 71.50 0.00e+00 1097.00
IUUC-Aca-004474 Anolis carolinensis 33.23 2.00e-80 294.00
IUUC-Ath-006801 Arabidopsis thaliana 97.29 0.00e+00 2914.00
IUUC-Ame-010718 Astyanax mexicanus 30.94 1.00e-80 295.00
IUUC-Bdi-014797 Brachypodium distachyon 53.86 0.00e+00 771.00
IUUC-Bol-015737 Brassica oleracea 87.01 0.00e+00 2580.00
IUUC-Bra-017961 Brassica rapa 86.65 0.00e+00 2563.00
IUUC-Cja-018868 Callithrix jacchus 33.13 3.00e-80 293.00
IUUC-Cre-023003 Chlamydomonas reinhardtii 33.23 4.00e-33 136.00
IUUC-Csa-023618 Chlorocebus sabaeus 32.99 4.00e-80 293.00
IUUC-Cho-024690 Choloepus hoffmanni 27.76 8.00e-35 143.00
IUUC-Csv-025813 Ciona savignyi 27.25 1.00e-57 217.00
IUUC-Dre-028029 Danio rerio 31.85 3.00e-79 290.00
IUUC-Dno-030048 Dasypus novemcinctus 32.64 3.00e-72 267.00
IUUC-Eeu-034688 Erinaceus europaeus 33.33 3.00e-38 154.00
IUUC-Gmo-039116 Gadus morhua 27.78 2.00e-22 101.00
IUUC-Gac-042435 Gasterosteus aculeatus 30.69 3.00e-62 234.00
IUUC-Gma-043340 Glycine max 56.84 0.00e+00 1658.00
IUUC-Itr-047962 Ictidomys tridecemlineatus 27.06 5.00e-23 102.00
IUUC-Lch-050646 Latimeria chalumnae 32.49 1.00e-77 285.00
IUUC-Lpe-051619 Leersia perrieri 59.13 0.00e+00 1025.00
IUUC-Loc-052672 Lepisosteus oculatus 32.69 4.00e-79 290.00
IUUC-Meu-056321 Macropus eugenii 29.47 1.00e-54 208.00
IUUC-Mtr-058094 Medicago truncatula 56.90 0.00e+00 1605.00
IUUC-Mac-065343 Musa acuminata 50.64 0.00e+00 1464.00
IUUC-Mlu-067928 Myotis lucifugus 32.35 8.00e-72 265.00
IUUC-Oba-075709 Oryza barthii 50.61 0.00e+00 1362.00
IUUC-Obr-076619 Oryza brachyantha 60.15 0.00e+00 1035.00
IUUC-Ogl-077493 Oryza glaberrima 48.42 0.00e+00 1130.00
IUUC-Ogu-078641 Oryza glumaepatula 47.15 0.00e+00 977.00
IUUC-Oin-079669 Oryza indica 69.63 0.00e+00 703.00
IUUC-Olo-080755 Oryza longistaminata 48.25 0.00e+00 1088.00
IUUC-Oni-082991 Oryza nivara 47.23 0.00e+00 1067.00
IUUC-Opu-083233 Oryza punctata 50.58 0.00e+00 1387.00
IUUC-Oru-085195 Oryza rufipogon 50.55 0.00e+00 1362.00
IUUC-Ola-086648 Oryzias latipes 33.43 9.00e-81 295.00
IUUC-Oga-088578 Otolemur garnettii 33.00 2.00e-69 257.00
IUUC-Pma-094427 Petromyzon marinus 32.25 7.00e-38 150.00
IUUC-Pfo-096191 Poecilia formosa 33.48 4.00e-81 296.00
IUUC-Pab-098402 Pongo abelii 32.99 6.00e-80 292.00
IUUC-Pop-099185 Populus trichocarpa 58.19 0.00e+00 1728.00
IUUC-Pca-101128 Procavia capensis 32.07 6.00e-66 246.00
IUUC-Ppe-101849 Prunus persica 55.75 0.00e+00 1664.00
IUUC-Sar-113004 Sorex araneus 30.95 6.00e-66 246.00
IUUC-Ssc-115461 Sus scrofa 31.83 7.00e-71 262.00
IUUC-Tru-117625 Takifugu rubripes 34.14 6.00e-81 296.00
IUUC-Tni-120716 Tetraodon nigroviridis 34.29 2.00e-81 297.00
IUUC-Tca-121098 Theobroma cacao 57.50 0.00e+00 1730.00
IUUC-Tae-125478 Triticum aestivum 64.69 0.00e+00 1024.00
IUUC-Tur-126809 Triticum urartu 62.47 0.00e+00 1010.00
IUUC-Tbe-127479 Tupaia belangeri 44.14 3.00e-30 127.00
IUUC-Ttr-128427 Tursiops truncatus 32.58 1.00e-71 265.00
IUUC-Vpa-130160 Vicugna pacos 32.46 1.00e-70 261.00
IUUC-Vvi-131362 Vitis vinifera 58.83 0.00e+00 1741.00
IUUC-Xtr-132717 Xenopus tropicalis 32.74 2.00e-81 298.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved