iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bgr-012249

Ensembl Protein ID

CCU78408

UniProt Accession

N1JB66; N1JB66_BLUG1

Genbank Protein ID

CCU78408.1

Protein Name

Coatomer subunit beta'

Genbank Nucleotide ID

CAUH01004008

Gene Name

BGHDH14_bgh01300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGHDH14_bgh01300	CCU78408	CCU78408

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-28	94.3	249	279
UBD/Beta-Prp	3.30e-63	212.0	36	319

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gHt+ v+  ++ ++ ++++sGs Dgt+k+W 
   Q: 249  GHTSNVSFACYhPElPIIISGSEDGTVKIWH 279
           899*9999999*999***************5 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklv 110
           +++++ ++f+  +++++t+ ++g + +w+++t+  +++++  + +v+a +f+ +++++v gs+D  ++v++++t++ + ++++h d+++++ ++p++ +++
   Q: 36   SERVKGIDFHSVEPWILTTLYSGHVYIWSYDTQAIVKTFELTDVPVRAGRFIARKNWIVCGSDDFQLRVYNYNTSEKITSFEAHPDYIRAIVVHPTQPFVL 136
           678999*********************************************************************************************** PP
   S: 111  sGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelvsgsldgtvklwd 208
           ++s+d ti++wd+++g++  ++++gh++ v++++++p++ n ++s++lDr v++W+l + +   tl+   t+ v+++++ +++  +++++ s+d+tvk+wd
   Q: 137  TASDDMTIKLWDWDKGWKCVQVFEGHSHYVMGLAINPKDtNTFASACLDRSVKIWSLGSSTANFTLEAHETKGVNHVDYYPQSdkPYILTTSDDRTVKIWD 237
           ****************98888***********************************************99********9998888**************** PP
   S: 209  lqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniw 292
           + +++ + tl+ght+nv+    +p+  +++sgs+Dg+++iW   +  + ++l++  ++ ++v++    ++  +++++d  + + 
   Q: 238  YTNKSLIATLEGHTSNVSFACYHPELPIIISGSEDGTVKIWHANTYRMEQSLNYGLERAWCVSY--QRGKQGIAVGFDEGAVVV 319
           ***************************************************************9..344444444455555554 PP

Organism

Blumeria graminis

Functional Description
(View)

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Protein Sequence
(Fasta)

MRLDVKVRLH HSILPDIKPN ISGPIPNQAL QLFARSERVK GIDFHSVEPW ILTTLYSGHV 60
YIWSYDTQAI VKTFELTDVP VRAGRFIARK NWIVCGSDDF QLRVYNYNTS EKITSFEAHP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGATTAG ATGTGAAGGT ACGCTTACAT CATTCAATAC TGCCTGATAT TAAACCCAAT 60
ATTTCTGGAC CTATTCCGAA TCAAGCATTG TTCAAGACAA TCTAGGAATT GAGTCATTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR016453--COPB2
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005829--C:cytosol
GO:0000139--C:Golgi membrane
GO:0005634--C:nucleus
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0032511--P:late endosome to vacuole transport via multivesicular body sorting pathway
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000654	Aegilops tauschii	45.58	0.00e+00	756.00
IUUC-Aml-002154	Ailuropoda melanoleuca	53.61	0.00e+00	956.00
IUUC-Atr-003090	Amborella trichopoda	52.29	0.00e+00	883.00
IUUC-Apl-003976	Anas platyrhynchos	53.61	0.00e+00	958.00
IUUC-Aca-004301	Anolis carolinensis	53.61	0.00e+00	962.00
IUUC-Aly-005643	Arabidopsis lyrata	52.46	0.00e+00	875.00
IUUC-Ath-007630	Arabidopsis thaliana	52.44	0.00e+00	883.00
IUUC-Ago-007914	Ashbya gossypii	50.67	0.00e+00	842.00
IUUC-Acl-008237	Aspergillus clavatus	78.08	0.00e+00	1355.00
IUUC-Afl-008535	Aspergillus flavus	77.55	0.00e+00	1315.00
IUUC-Afu-008845	Aspergillus fumigatus	75.78	0.00e+00	1314.00
IUUC-Ani-009135	Aspergillus nidulans	77.68	0.00e+00	1302.00
IUUC-Ang-009654	Aspergillus niger	82.90	0.00e+00	1167.00
IUUC-Aor-009939	Aspergillus oryzae	78.30	0.00e+00	1373.00
IUUC-Ate-010355	Aspergillus terreus	77.96	0.00e+00	1313.00
IUUC-Ame-010922	Astyanax mexicanus	48.60	0.00e+00	814.00
IUUC-Bta-013579	Bos taurus	55.71	0.00e+00	879.00
IUUC-Bci-013866	Botrytis cinerea	87.19	0.00e+00	1413.00
IUUC-Bdi-015046	Brachypodium distachyon	52.48	0.00e+00	887.00
IUUC-Bol-016012	Brassica oleracea	52.90	0.00e+00	896.00
IUUC-Bra-017758	Brassica rapa	51.20	0.00e+00	892.00
IUUC-Cel-018387	Caenorhabditis elegans	50.98	0.00e+00	890.00
IUUC-Cja-019145	Callithrix jacchus	53.49	0.00e+00	956.00
IUUC-Cfa-020564	Canis familiaris	53.61	0.00e+00	957.00
IUUC-Cpo-022201	Cavia porcellus	53.73	0.00e+00	960.00
IUUC-Cre-022938	Chlamydomonas reinhardtii	52.04	0.00e+00	838.00
IUUC-Csa-023383	Chlorocebus sabaeus	58.79	0.00e+00	734.00
IUUC-Cho-024454	Choloepus hoffmanni	51.78	0.00e+00	811.00
IUUC-Cin-025681	Ciona intestinalis	54.22	0.00e+00	894.00
IUUC-Csv-026012	Ciona savignyi	54.78	0.00e+00	880.00
IUUC-Cgl-026649	Colletotrichum gloeosporioides	77.27	0.00e+00	1243.00
IUUC-Cne-026986	Cryptococcus neoformans	57.14	0.00e+00	968.00
IUUC-Cme-027219	Cyanidioschyzon merolae	45.08	0.00e+00	769.00
IUUC-Dre-027846	Danio rerio	54.45	0.00e+00	947.00
IUUC-Dor-030462	Dipodomys ordii	54.09	0.00e+00	768.00
IUUC-Dse-031268	Dothistroma septosporum	75.82	0.00e+00	1293.00
IUUC-Dme-031791	Drosophila melanogaster	53.62	0.00e+00	905.00
IUUC-Ete-033166	Echinops telfairi	52.35	2.00e-176	611.00
IUUC-Eca-034180	Equus caballus	52.23	0.00e+00	915.00
IUUC-Eeu-035086	Erinaceus europaeus	42.71	4.00e-104	370.00
IUUC-Fca-036265	Felis catus	53.61	0.00e+00	957.00
IUUC-Fal-037202	Ficedula albicollis	53.33	0.00e+00	931.00
IUUC-Fox-037711	Fusarium oxysporum	82.35	0.00e+00	1290.00
IUUC-Fso-038268	Fusarium solani	81.74	0.00e+00	1295.00
IUUC-Gmo-039046	Gadus morhua	53.51	0.00e+00	938.00
IUUC-Ggr-039863	Gaeumannomyces graminis	83.85	0.00e+00	1338.00
IUUC-Gga-041112	Gallus gallus	53.61	0.00e+00	962.00
IUUC-Gac-041733	Gasterosteus aculeatus	53.88	0.00e+00	916.00
IUUC-Gma-044333	Glycine max	53.63	0.00e+00	909.00
IUUC-Ggo-044984	Gorilla gorilla	53.49	0.00e+00	956.00
IUUC-Hsa-046698	Homo sapiens	53.49	0.00e+00	955.00
IUUC-Hvu-047669	Hordeum vulgare	59.37	3.00e-134	469.00
IUUC-Itr-048212	Ictidomys tridecemlineatus	53.61	0.00e+00	956.00
IUUC-Kpa-049265	Komagataella pastoris	55.60	0.00e+00	944.00
IUUC-Lch-050473	Latimeria chalumnae	52.71	0.00e+00	948.00
IUUC-Lpe-051579	Leersia perrieri	52.79	0.00e+00	884.00
IUUC-Loc-052675	Lepisosteus oculatus	53.64	0.00e+00	947.00
IUUC-Lma-053218	Leptosphaeria maculans	72.96	0.00e+00	1226.00
IUUC-Laf-053757	Loxodonta africana	53.37	0.00e+00	949.00
IUUC-Mcc-054859	Macaca mulatta	53.49	0.00e+00	956.00
IUUC-Meu-056174	Macropus eugenii	45.38	1.00e-92	332.00
IUUC-Mor-057264	Magnaporthe oryzae	81.81	0.00e+00	1305.00
IUUC-Mpo-057538	Magnaporthe poae	82.86	0.00e+00	1355.00
IUUC-Mtr-058310	Medicago truncatula	52.83	0.00e+00	911.00
IUUC-Mla-058937	Melampsora laricipopulina	57.00	0.00e+00	957.00
IUUC-Mga-059875	Meleagris gallopavo	53.37	0.00e+00	956.00
IUUC-Mvi-060240	Microbotryum violaceum	57.39	0.00e+00	980.00
IUUC-Mmr-061261	Microcebus murinus	53.61	0.00e+00	957.00
IUUC-Mdo-062076	Monodelphis domestica	54.10	0.00e+00	969.00
IUUC-Mmu-063324	Mus musculus	53.61	0.00e+00	958.00
IUUC-Mac-064636	Musa acuminata	52.64	0.00e+00	885.00
IUUC-Mpu-065961	Mustela putorius furo	53.61	0.00e+00	956.00
IUUC-Mlu-067059	Myotis lucifugus	53.37	0.00e+00	928.00
IUUC-Nfi-068277	Neosartorya fischeri	74.10	0.00e+00	1312.00
IUUC-Ncr-068659	Neurospora crassa	78.31	0.00e+00	1338.00
IUUC-Nle-069034	Nomascus leucogenys	53.49	0.00e+00	955.00
IUUC-Opr-070334	Ochotona princeps	56.30	0.00e+00	892.00
IUUC-Ont-071563	Oreochromis niloticus	53.64	0.00e+00	940.00
IUUC-Oan-073416	Ornithorhynchus anatinus	55.08	0.00e+00	930.00
IUUC-Ocu-074522	Oryctolagus cuniculus	53.49	0.00e+00	953.00
IUUC-Oba-075760	Oryza barthii	52.03	0.00e+00	880.00
IUUC-Obr-076163	Oryza brachyantha	52.79	0.00e+00	885.00
IUUC-Ogl-077450	Oryza glaberrima	52.40	0.00e+00	899.00
IUUC-Ogu-078994	Oryza glumaepatula	52.03	0.00e+00	880.00
IUUC-Oin-079856	Oryza indica	53.28	0.00e+00	883.00
IUUC-Olo-080731	Oryza longistaminata	52.74	0.00e+00	875.00
IUUC-Ome-081762	Oryza meridionalis	49.38	0.00e+00	813.00
IUUC-Oni-082324	Oryza nivara	52.03	0.00e+00	880.00
IUUC-Opu-083400	Oryza punctata	50.72	0.00e+00	862.00
IUUC-Oru-084829	Oryza rufipogon	52.03	0.00e+00	880.00
IUUC-Osa-086026	Oryza sativa	52.64	0.00e+00	902.00
IUUC-Ola-087245	Oryzias latipes	54.01	0.00e+00	946.00
IUUC-Olu-087655	Ostreococcus lucimarinus	52.24	0.00e+00	875.00
IUUC-Oga-088163	Otolemur garnettii	52.16	0.00e+00	914.00
IUUC-Oar-089842	Ovis aries	53.49	0.00e+00	957.00
IUUC-Ptr-090501	Pan troglodytes	53.49	0.00e+00	956.00
IUUC-Pan-092011	Papio anubis	53.49	0.00e+00	956.00
IUUC-Psi-093308	Pelodiscus sinensis	53.61	0.00e+00	957.00
IUUC-Pma-094695	Petromyzon marinus	53.31	0.00e+00	872.00
IUUC-Pno-094785	Phaeosphaeria nodorum	75.78	6.00e-137	479.00
IUUC-Ppa-095638	Physcomitrella patens	53.44	0.00e+00	908.00
IUUC-Pfo-096587	Poecilia formosa	54.01	0.00e+00	946.00
IUUC-Pab-097926	Pongo abelii	52.04	0.00e+00	879.00
IUUC-Pop-099634	Populus trichocarpa	53.52	0.00e+00	904.00
IUUC-Pca-100965	Procavia capensis	52.41	0.00e+00	922.00
IUUC-Ppe-101470	Prunus persica	53.63	0.00e+00	906.00
IUUC-Pva-102451	Pteropus vampyrus	53.18	0.00e+00	752.00
IUUC-Pgr-103453	Puccinia graminis	56.39	0.00e+00	956.00
IUUC-Ptt-103868	Puccinia triticina	55.28	0.00e+00	954.00
IUUC-Pte-104274	Pyrenophora teres	74.69	0.00e+00	1252.00
IUUC-Pyt-104794	Pyrenophora triticirepentis	70.48	0.00e+00	1209.00
IUUC-Rno-105979	Rattus norvegicus	48.16	0.00e+00	714.00
IUUC-Sce-106269	Saccharomyces cerevisiae	51.30	0.00e+00	852.00
IUUC-Sha-106905	Sarcophilus harrisii	54.10	0.00e+00	969.00
IUUC-Sja-107838	Schizosaccharomyces japonicus	51.85	0.00e+00	862.00
IUUC-Spo-108299	Schizosaccharomyces pombe	52.93	0.00e+00	890.00
IUUC-Smo-108695	Selaginella moellendorffii	52.28	0.00e+00	902.00
IUUC-Sit-110239	Setaria italica	53.13	0.00e+00	900.00
IUUC-Sly-111775	Solanum lycopersicum	53.57	0.00e+00	893.00
IUUC-Stu-112906	Solanum tuberosum	52.70	0.00e+00	816.00
IUUC-Sar-113472	Sorex araneus	53.14	0.00e+00	700.00
IUUC-Sbi-114052	Sorghum bicolor	53.23	0.00e+00	904.00
IUUC-Sre-115040	Sporisorium reilianum	56.56	0.00e+00	958.00
IUUC-Ssc-115593	Sus scrofa	53.49	0.00e+00	956.00
IUUC-Tgu-117239	Taeniopygia guttata	53.61	0.00e+00	962.00
IUUC-Tru-118025	Takifugu rubripes	53.57	0.00e+00	937.00
IUUC-Tsy-118824	Tarsius syrichta	52.24	0.00e+00	693.00
IUUC-Tni-120142	Tetraodon nigroviridis	53.64	0.00e+00	935.00
IUUC-Tca-121613	Theobroma cacao	53.87	0.00e+00	907.00
IUUC-Tre-122072	Trichoderma reesei	79.39	0.00e+00	1343.00
IUUC-Tvi-122546	Trichoderma virens	80.50	0.00e+00	1344.00
IUUC-Tae-125292	Triticum aestivum	52.64	0.00e+00	895.00
IUUC-Tur-126283	Triticum urartu	46.35	0.00e+00	756.00
IUUC-Tme-127041	Tuber melanosporum	75.03	0.00e+00	1293.00
IUUC-Tbe-127770	Tupaia belangeri	54.39	0.00e+00	781.00
IUUC-Ttr-129294	Tursiops truncatus	53.49	0.00e+00	954.00
IUUC-Uma-129351	Ustilago maydis	54.97	0.00e+00	955.00
IUUC-Vda-129716	Verticillium dahliae	81.50	0.00e+00	1380.00
IUUC-Vpa-130037	Vicugna pacos	44.91	7.00e-111	393.00
IUUC-Vvi-131689	Vitis vinifera	53.03	0.00e+00	904.00
IUUC-Xtr-132633	Xenopus tropicalis	54.83	0.00e+00	950.00
IUUC-Xma-133347	Xiphophorus maculatus	53.88	0.00e+00	945.00
IUUC-Yli-134455	Yarrowia lipolytica	58.20	0.00e+00	962.00
IUUC-Zma-135867	Zea mays	53.60	0.00e+00	905.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence