iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132178

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01136370

Gene Name

gtf3c2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000020964.3	ENSXETT00000045304.3	ENSXETP00000045304.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-12	46.6	513	546

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H   v+++++   d ++lv++++D  +k WDlr+
   Q: 513  HDHAVRSVEWckADgNFLVTSGNDRRLKFWDLRR 546
           8899********666****************987 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

PALPASVPEP MSPTLPCLHE NGPPTGSQLT PLVKVPKKRG RKSKAELLLI RQAQALDAEA 60
LARQSLALRQ ESDNQDMETT PSGRPRRRAA KTALMYLHDL ADELSSSGLS SPTKPSAVSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGCTTTGC CCGCCTCTGT GCCCGAACCA ATGTCCCCAA CGCTGCCCTG CCTACATGAG 60
AACGGACCTC CCACGGGCAG CCAGCTCACC CCCCTGGTGA AGGTACCCAA GAAGAGAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000875	Aegilops tauschii	26.34	2.00e-13	71.20
IUUC-Aml-001488	Ailuropoda melanoleuca	46.81	0.00e+00	663.00
IUUC-Apl-003185	Anas platyrhynchos	55.61	0.00e+00	693.00
IUUC-Aca-005245	Anolis carolinensis	50.50	0.00e+00	701.00
IUUC-Ath-006785	Arabidopsis thaliana	26.43	6.00e-11	62.80
IUUC-Ame-010654	Astyanax mexicanus	44.50	3.00e-154	539.00
IUUC-Bta-012551	Bos taurus	45.35	0.00e+00	657.00
IUUC-Bdi-014228	Brachypodium distachyon	21.41	1.00e-11	66.20
IUUC-Bol-015619	Brassica oleracea	27.17	3.00e-11	64.30
IUUC-Bra-017820	Brassica rapa	27.72	7.00e-11	62.80
IUUC-Cja-019727	Callithrix jacchus	47.01	0.00e+00	640.00
IUUC-Cfa-020469	Canis familiaris	46.33	0.00e+00	660.00
IUUC-Cpo-021854	Cavia porcellus	48.92	0.00e+00	670.00
IUUC-Csa-023726	Chlorocebus sabaeus	47.93	0.00e+00	646.00
IUUC-Cho-024296	Choloepus hoffmanni	53.93	9.00e-121	427.00
IUUC-Dre-028735	Danio rerio	39.67	4.00e-161	561.00
IUUC-Dno-028895	Dasypus novemcinctus	48.45	0.00e+00	642.00
IUUC-Dor-030617	Dipodomys ordii	52.16	0.00e+00	657.00
IUUC-Eca-033420	Equus caballus	50.95	0.00e+00	638.00
IUUC-Eeu-035060	Erinaceus europaeus	50.60	3.00e-102	366.00
IUUC-Fca-035603	Felis catus	46.65	0.00e+00	652.00
IUUC-Fal-037637	Ficedula albicollis	54.45	0.00e+00	739.00
IUUC-Gga-040991	Gallus gallus	54.71	0.00e+00	707.00
IUUC-Ggo-045595	Gorilla gorilla	46.22	0.00e+00	646.00
IUUC-Hsa-046196	Homo sapiens	46.22	0.00e+00	647.00
IUUC-Hvu-047169	Hordeum vulgare	28.02	2.00e-12	67.80
IUUC-Itr-048222	Ictidomys tridecemlineatus	51.27	0.00e+00	639.00
IUUC-Lch-050384	Latimeria chalumnae	49.85	2.00e-173	602.00
IUUC-Lpe-050995	Leersia perrieri	23.55	3.00e-09	57.80
IUUC-Loc-052778	Lepisosteus oculatus	46.56	0.00e+00	688.00
IUUC-Laf-054474	Loxodonta africana	51.24	6.00e-166	577.00
IUUC-Mcc-055795	Macaca mulatta	51.57	0.00e+00	645.00
IUUC-Mga-059757	Meleagris gallopavo	68.50	5.00e-85	306.00
IUUC-Mmr-061702	Microcebus murinus	52.35	6.00e-171	594.00
IUUC-Mdo-063012	Monodelphis domestica	53.68	0.00e+00	672.00
IUUC-Mmu-063858	Mus musculus	50.39	0.00e+00	630.00
IUUC-Mpu-066147	Mustela putorius furo	43.77	4.00e-169	588.00
IUUC-Mlu-067530	Myotis lucifugus	49.93	0.00e+00	634.00
IUUC-Nle-069278	Nomascus leucogenys	45.98	0.00e+00	645.00
IUUC-Opr-070222	Ochotona princeps	51.38	0.00e+00	638.00
IUUC-Ont-071367	Oreochromis niloticus	39.84	1.00e-136	480.00
IUUC-Oan-073357	Ornithorhynchus anatinus	55.03	9.00e-151	526.00
IUUC-Ocu-074887	Oryctolagus cuniculus	51.71	0.00e+00	639.00
IUUC-Obr-076376	Oryza brachyantha	21.89	3.00e-10	60.80
IUUC-Ogl-077258	Oryza glaberrima	23.84	5.00e-12	67.00
IUUC-Ogu-078002	Oryza glumaepatula	26.15	4.00e-10	60.10
IUUC-Oin-079689	Oryza indica	23.62	1.00e-11	65.50
IUUC-Olo-080486	Oryza longistaminata	31.52	3.00e-07	50.40
IUUC-Oni-082369	Oryza nivara	26.59	7.00e-11	63.20
IUUC-Opu-083230	Oryza punctata	22.83	3.00e-13	71.20
IUUC-Osa-085403	Oryza sativa	26.89	1.00e-11	65.50
IUUC-Ola-087512	Oryzias latipes	39.72	4.00e-74	271.00
IUUC-Oga-088051	Otolemur garnettii	51.29	0.00e+00	635.00
IUUC-Oar-090076	Ovis aries	45.35	0.00e+00	639.00
IUUC-Ptr-091503	Pan troglodytes	46.09	9.00e-161	560.00
IUUC-Pan-092123	Papio anubis	47.93	0.00e+00	646.00
IUUC-Psi-094020	Pelodiscus sinensis	55.92	0.00e+00	736.00
IUUC-Pma-094395	Petromyzon marinus	43.62	8.00e-82	296.00
IUUC-Pfo-097023	Poecilia formosa	39.04	4.00e-131	462.00
IUUC-Pab-097532	Pongo abelii	46.10	0.00e+00	641.00
IUUC-Pop-099342	Populus trichocarpa	27.72	8.00e-13	68.90
IUUC-Pca-100255	Procavia capensis	53.68	2.00e-120	426.00
IUUC-Ppe-101268	Prunus persica	28.30	6.00e-12	66.60
IUUC-Pva-102403	Pteropus vampyrus	51.11	0.00e+00	640.00
IUUC-Rno-105329	Rattus norvegicus	49.76	9.00e-179	620.00
IUUC-Sha-106857	Sarcophilus harrisii	53.33	0.00e+00	687.00
IUUC-Sit-110532	Setaria italica	26.98	1.00e-13	72.40
IUUC-Sly-110922	Solanum lycopersicum	25.41	6.00e-09	56.20
IUUC-Sar-113690	Sorex araneus	43.27	3.00e-60	226.00
IUUC-Sbi-114680	Sorghum bicolor	26.98	2.00e-12	68.90
IUUC-Tgu-117058	Taeniopygia guttata	58.43	6.00e-123	433.00
IUUC-Tru-118675	Takifugu rubripes	42.03	1.00e-139	489.00
IUUC-Tsy-119606	Tarsius syrichta	41.52	2.00e-103	370.00
IUUC-Tni-120125	Tetraodon nigroviridis	39.37	5.00e-76	277.00
IUUC-Tae-125334	Triticum aestivum	23.01	2.00e-14	75.10
IUUC-Tur-126862	Triticum urartu	22.84	2.00e-12	68.20
IUUC-Tbe-127727	Tupaia belangeri	44.61	2.00e-171	595.00
IUUC-Ttr-128425	Tursiops truncatus	47.60	9.00e-154	537.00
IUUC-Vpa-130050	Vicugna pacos	51.77	7.00e-176	610.00
IUUC-Vvi-131706	Vitis vinifera	25.81	1.00e-09	58.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence