iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115287

Ensembl Protein ID

ENSSSCP00000015104.2

UniProt Accession

F1RLI4; F1RLI4_PIG

Genbank Protein ID

ENSSSCP00000015104

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU972447

Gene Name

WDR36

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000014199.2	ENSSSCT00000015514.2	ENSSSCP00000015104.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-21	75.8	621	658
UBD/Beta-Prp	9.30e-51	173.0	492	660

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ ++++af +d + l+s+s D++i+ WDl +g l+
   Q: 621  GHQGQINDMAFsPDgRWLISASMDCSIRTWDLPSGCLI 658
           8***********99999***************999876 PP

UBD/Beta-Prp

   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           + + +++++++   g++ v+G +  ti v+++++g    +   ++ h+g++++v+v++ ++l +s++  + +++W+ k++ l++  +  
   Q: 492  KDDITATAVDITSCGNFAVIGLSSGTIDVYNMQSGIHRGSfgKDQAHKGSIRGVAVDGLNQLTISAGSEGLLKFWNFKNKILIHSVSL- 579
           444456667777788*******************988877889*******************************************75. PP
   S: 179  htdsvyslsfdsngkelvsgsl.dgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllkt 259
            ++s + + +++++  ++  +l d ++ + d++t ++vr++ gh+ ++++++fsp++ +l+s+s+D sir Wdl sg l+ +
   Q: 580  -DSSPNMMLLHRDSSGILGLALdDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISASMDCSIRTWDLPSGCLIDS 660
           .6666777777777666666651569************************************************99876665 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

FSCTEDSLRS HDWQLEPEAL GSLRPGRRFY RERRANRLGC AVSTGIGAQR NSYAVAMERG 60
GGDRTASALF AGFRALGLFS NDIPHVVRFS ALKRRFFVTT CVGKSLHTYD VQKLSLVAVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAGTTGCA CTGAGGATAG TCTCCGCTCA CACGATTGGC AGCTGGAACC GGAAGCGCTT 60
GGGAGCCTGC GGCCGGGCCG AAGATTTTAC CGCGAGAGAC GTGCCAACCG GCTGGGGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0030516--P:regulation of axon extension
GO:0001895--P:retina homeostasis
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	37.08	2.00e-148	519.00
IUUC-Aml-002289	Ailuropoda melanoleuca	92.28	0.00e+00	1742.00
IUUC-Atr-002859	Amborella trichopoda	32.91	8.00e-125	441.00
IUUC-Apl-003505	Anas platyrhynchos	74.82	0.00e+00	1211.00
IUUC-Aca-004339	Anolis carolinensis	72.59	0.00e+00	1310.00
IUUC-Aly-005913	Arabidopsis lyrata	36.64	1.00e-157	550.00
IUUC-Ath-006767	Arabidopsis thaliana	37.34	1.00e-160	560.00
IUUC-Ago-007763	Ashbya gossypii	32.36	2.00e-119	423.00
IUUC-Acl-008275	Aspergillus clavatus	33.29	2.00e-89	323.00
IUUC-Afl-008457	Aspergillus flavus	33.29	7.00e-91	328.00
IUUC-Afu-008914	Aspergillus fumigatus	33.86	3.00e-105	376.00
IUUC-Ani-009225	Aspergillus nidulans	32.37	8.00e-104	371.00
IUUC-Aor-010046	Aspergillus oryzae	32.11	2.00e-116	413.00
IUUC-Ate-010337	Aspergillus terreus	34.06	5.00e-114	405.00
IUUC-Ame-010963	Astyanax mexicanus	67.18	0.00e+00	1204.00
IUUC-Bgr-011973	Blumeria graminis	30.94	4.00e-113	402.00
IUUC-Bta-012462	Bos taurus	91.19	0.00e+00	1694.00
IUUC-Bci-013940	Botrytis cinerea	31.17	2.00e-112	400.00
IUUC-Bdi-014725	Brachypodium distachyon	35.88	4.00e-150	525.00
IUUC-Bol-016534	Brassica oleracea	36.77	1.00e-153	536.00
IUUC-Bra-016781	Brassica rapa	36.16	2.00e-151	529.00
IUUC-Cel-018581	Caenorhabditis elegans	29.53	1.00e-98	353.00
IUUC-Cja-019675	Callithrix jacchus	93.08	0.00e+00	1695.00
IUUC-Cfa-020118	Canis familiaris	93.30	0.00e+00	1655.00
IUUC-Cpo-021798	Cavia porcellus	91.75	0.00e+00	1602.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	28.94	2.00e-26	114.00
IUUC-Csa-023547	Chlorocebus sabaeus	93.66	0.00e+00	1675.00
IUUC-Cho-024518	Choloepus hoffmanni	77.74	0.00e+00	1315.00
IUUC-Cin-025339	Ciona intestinalis	46.42	0.00e+00	792.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	29.42	4.00e-111	395.00
IUUC-Cne-026859	Cryptococcus neoformans	34.89	4.00e-142	498.00
IUUC-Cme-027173	Cyanidioschyzon merolae	28.66	6.00e-91	328.00
IUUC-Dre-027733	Danio rerio	65.52	0.00e+00	1199.00
IUUC-Dno-029439	Dasypus novemcinctus	93.19	0.00e+00	1646.00
IUUC-Dor-030329	Dipodomys ordii	75.73	0.00e+00	1365.00
IUUC-Dse-031511	Dothistroma septosporum	30.02	6.00e-106	378.00
IUUC-Dme-031694	Drosophila melanogaster	40.45	0.00e+00	692.00
IUUC-Ete-032930	Echinops telfairi	81.26	0.00e+00	1361.00
IUUC-Eca-033302	Equus caballus	91.82	0.00e+00	1731.00
IUUC-Eeu-034516	Erinaceus europaeus	89.31	0.00e+00	1717.00
IUUC-Fca-036064	Felis catus	94.99	0.00e+00	1676.00
IUUC-Fal-037024	Ficedula albicollis	72.87	0.00e+00	1300.00
IUUC-Fox-037787	Fusarium oxysporum	28.90	7.00e-95	342.00
IUUC-Fso-038378	Fusarium solani	29.60	5.00e-96	345.00
IUUC-Gmo-039637	Gadus morhua	53.71	1.00e-154	539.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.59	7.00e-105	375.00
IUUC-Gga-040982	Gallus gallus	71.29	0.00e+00	1327.00
IUUC-Gac-041565	Gasterosteus aculeatus	56.08	0.00e+00	940.00
IUUC-Gma-043185	Glycine max	35.85	2.00e-156	546.00
IUUC-Ggo-045463	Gorilla gorilla	90.34	0.00e+00	1719.00
IUUC-Hsa-045675	Homo sapiens	90.21	0.00e+00	1721.00
IUUC-Hvu-047352	Hordeum vulgare	35.93	3.00e-135	475.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	93.75	0.00e+00	1706.00
IUUC-Kpa-049164	Komagataella pastoris	34.34	7.00e-112	398.00
IUUC-Lch-050476	Latimeria chalumnae	69.43	0.00e+00	1272.00
IUUC-Lpe-051556	Leersia perrieri	33.80	5.00e-97	348.00
IUUC-Loc-052820	Lepisosteus oculatus	68.86	0.00e+00	1237.00
IUUC-Lma-052961	Leptosphaeria maculans	32.84	6.00e-107	382.00
IUUC-Laf-054006	Loxodonta africana	91.91	0.00e+00	1628.00
IUUC-Mcc-055037	Macaca mulatta	89.83	0.00e+00	1712.00
IUUC-Mor-057280	Magnaporthe oryzae	29.70	1.00e-107	384.00
IUUC-Mpo-057408	Magnaporthe poae	29.25	3.00e-100	360.00
IUUC-Mtr-058473	Medicago truncatula	34.91	3.00e-153	535.00
IUUC-Mla-058892	Melampsora laricipopulina	33.85	9.00e-118	417.00
IUUC-Mga-059598	Meleagris gallopavo	62.84	0.00e+00	1024.00
IUUC-Mvi-060334	Microbotryum violaceum	34.39	6.00e-119	421.00
IUUC-Mmr-061239	Microcebus murinus	90.11	0.00e+00	1677.00
IUUC-Mdo-062471	Monodelphis domestica	81.11	0.00e+00	1428.00
IUUC-Mmu-063872	Mus musculus	88.29	0.00e+00	1634.00
IUUC-Mac-064631	Musa acuminata	35.62	9.00e-136	477.00
IUUC-Mpu-066039	Mustela putorius furo	94.87	0.00e+00	1714.00
IUUC-Mlu-067485	Myotis lucifugus	94.12	0.00e+00	1695.00
IUUC-Nfi-068319	Neosartorya fischeri	30.45	7.00e-104	371.00
IUUC-Ncr-068725	Neurospora crassa	29.88	1.00e-103	371.00
IUUC-Nle-069050	Nomascus leucogenys	90.21	0.00e+00	1721.00
IUUC-Opr-070437	Ochotona princeps	79.05	6.00e-139	487.00
IUUC-Ont-071574	Oreochromis niloticus	58.20	0.00e+00	1024.00
IUUC-Oan-072826	Ornithorhynchus anatinus	76.28	0.00e+00	1352.00
IUUC-Ocu-073995	Oryctolagus cuniculus	93.08	0.00e+00	1617.00
IUUC-Oba-075407	Oryza barthii	32.75	4.00e-124	438.00
IUUC-Obr-076451	Oryza brachyantha	36.43	4.00e-158	551.00
IUUC-Ogl-077535	Oryza glaberrima	35.51	2.00e-151	529.00
IUUC-Ogu-077995	Oryza glumaepatula	32.48	3.00e-122	432.00
IUUC-Oin-079431	Oryza indica	35.91	2.00e-153	536.00
IUUC-Olo-080495	Oryza longistaminata	32.54	3.00e-120	426.00
IUUC-Oni-082336	Oryza nivara	34.61	3.00e-143	502.00
IUUC-Opu-084028	Oryza punctata	34.16	1.00e-128	453.00
IUUC-Oru-084500	Oryza rufipogon	32.51	6.00e-122	431.00
IUUC-Osa-086242	Oryza sativa	35.80	1.00e-152	533.00
IUUC-Ola-086612	Oryzias latipes	55.58	0.00e+00	811.00
IUUC-Olu-087703	Ostreococcus lucimarinus	30.58	5.00e-109	389.00
IUUC-Oga-088572	Otolemur garnettii	92.56	0.00e+00	1654.00
IUUC-Oar-090363	Ovis aries	90.44	0.00e+00	1715.00
IUUC-Ptr-090477	Pan troglodytes	90.21	0.00e+00	1696.00
IUUC-Pan-092914	Papio anubis	93.64	0.00e+00	1702.00
IUUC-Psi-093019	Pelodiscus sinensis	74.19	0.00e+00	1326.00
IUUC-Pma-094303	Petromyzon marinus	50.82	0.00e+00	801.00
IUUC-Pno-094938	Phaeosphaeria nodorum	32.27	2.00e-99	356.00
IUUC-Ppa-095720	Physcomitrella patens	35.80	1.00e-152	533.00
IUUC-Pfo-097034	Poecilia formosa	56.23	0.00e+00	966.00
IUUC-Pab-097669	Pongo abelii	93.64	0.00e+00	1699.00
IUUC-Pop-098835	Populus trichocarpa	35.95	1.00e-153	536.00
IUUC-Pca-101097	Procavia capensis	77.91	1.00e-178	620.00
IUUC-Ppe-101430	Prunus persica	35.85	6.00e-157	547.00
IUUC-Pva-103152	Pteropus vampyrus	91.09	0.00e+00	1739.00
IUUC-Pgr-103517	Puccinia graminis	31.38	2.00e-124	440.00
IUUC-Ptt-103697	Puccinia triticina	32.73	5.00e-100	358.00
IUUC-Pte-104121	Pyrenophora teres	31.87	3.00e-106	379.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	32.07	4.00e-108	385.00
IUUC-Rno-105435	Rattus norvegicus	88.73	0.00e+00	1599.00
IUUC-Sce-106202	Saccharomyces cerevisiae	31.50	1.00e-110	394.00
IUUC-Sha-107272	Sarcophilus harrisii	81.45	0.00e+00	1374.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	36.24	2.00e-154	539.00
IUUC-Spo-108256	Schizosaccharomyces pombe	37.31	1.00e-152	533.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	30.57	6.00e-111	395.00
IUUC-Smo-108762	Selaginella moellendorffii	35.64	4.00e-155	541.00
IUUC-Sit-110051	Setaria italica	36.04	4.00e-151	528.00
IUUC-Sly-111181	Solanum lycopersicum	35.55	6.00e-156	544.00
IUUC-Stu-112018	Solanum tuberosum	35.42	5.00e-155	541.00
IUUC-Sar-113348	Sorex araneus	89.88	0.00e+00	1170.00
IUUC-Sbi-114282	Sorghum bicolor	36.68	9.00e-152	530.00
IUUC-Sre-114946	Sporisorium reilianum	32.68	2.00e-94	340.00
IUUC-Tgu-117138	Taeniopygia guttata	69.94	0.00e+00	1089.00
IUUC-Tru-118232	Takifugu rubripes	57.68	0.00e+00	990.00
IUUC-Tsy-119502	Tarsius syrichta	75.63	0.00e+00	1380.00
IUUC-Tni-120378	Tetraodon nigroviridis	56.49	0.00e+00	962.00
IUUC-Tca-121506	Theobroma cacao	35.96	1.00e-147	516.00
IUUC-Tre-122166	Trichoderma reesei	29.81	1.00e-105	377.00
IUUC-Tvi-122385	Trichoderma virens	29.88	3.00e-106	379.00
IUUC-Tae-122836	Triticum aestivum	36.16	6.00e-154	537.00
IUUC-Tur-126490	Triticum urartu	33.11	8.00e-115	408.00
IUUC-Tme-127157	Tuber melanosporum	33.63	9.00e-112	397.00
IUUC-Tbe-127981	Tupaia belangeri	84.86	0.00e+00	1422.00
IUUC-Ttr-128886	Tursiops truncatus	91.28	0.00e+00	1718.00
IUUC-Uma-129439	Ustilago maydis	31.90	9.00e-103	368.00
IUUC-Vda-129760	Verticillium dahliae	29.69	1.00e-103	370.00
IUUC-Vpa-130456	Vicugna pacos	91.64	0.00e+00	1741.00
IUUC-Vvi-131086	Vitis vinifera	35.15	8.00e-150	524.00
IUUC-Xtr-131829	Xenopus tropicalis	68.16	0.00e+00	1237.00
IUUC-Xma-133588	Xiphophorus maculatus	56.34	0.00e+00	952.00
IUUC-Yli-134328	Yarrowia lipolytica	31.24	4.00e-112	399.00
IUUC-Zma-135808	Zea mays	35.72	9.00e-151	527.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence