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Tag Content
UUCD2 ID IUUC-Cre-022746
UUCD1 version UUC-ChR-00018
Ensembl Protein ID EDP00085
UniProt Accession A8J7C9; A8J7C9_CHLRE
Genbank Protein ID EDP00085.1
Protein Name Katanin p80 WD40 repeat-containing subunit B1 homolog
Genbank Nucleotide ID DS496141
Gene Name PF15; CHLREDRAFT_80954
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
CHLREDRAFT_80954 EDP00085 EDP00085
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.80e-39 131.5 141 179
UBD/Beta-Prp 1.30e-51 175.1 13 257
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    gH+++vt +++ +d + ++s+s+Dg +k+WD+r+g+ll+
   Q: 141 GHNAGVTHVRYsPDgNWVASASGDGAVKIWDVRQGRLLQ 179
    8***********999*********************987 PP
   


   UBD/Beta-Prp

   S: 7    ghhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg 106
    ++h + ++cv + + +l+tg++d+++ vw + + ++ sl gh++ v +v+f++d+ + + g++ + ikv++l+tgk + +l+gh+++v++l+++p++
   Q: 13 AAHAGDVRCVRIgRKTAGVLVTGGDDKKVNVWALGKTTASFSLTGHQSSVESVSFDNDEMVVAAGGSNGSIKVFELQTGKVTKSLSGHKSNVMCLAWHPYD 113
    566777778999899999*********************************************************************************** PP
   S: 107 dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklw 207
    ++++sGs d +++w+l+ ++ + t++gh++ v++v+++pdgn ++s+s D++v++Wd+++g+ll++l + ++ ++f+++ +++ s+d+ v++w
   Q: 114 STIISGSMDTNVKLWNLRDKEAVM-TFKGHNAGVTHVRYSPDGNWVASASGDGAVKIWDVRQGRLLQDLCPPTKYEITGVEFSPTEYLMATSSRDKLVRFW 213
    ************************.********************************************777899************************** PP
   S: 208 dlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlr 252
    dl+t c+++ + ++v+ + f +++ + s+ +Dg r+W+++
   Q: 214 DLETFACIDQTTPEATPVRNICFYNDGRTIFSAVQDG-CRVWNVD 257
    ************************9999999998876.6999976 PP
   

Organism Chlamydomonas reinhardtii
Functional Description
(View)

Functional Description



     May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
Protein Sequence
(Fasta)
MSSSRYAKLV EFAAHAGDVR CVRIGRKTAG VLVTGGDDKK VNVWALGKTT ASFSLTGHQS 60
SVESVSFDND EMVVAAGGSN GSIKVFELQT GKVTKSLSGH KSNVMCLAWH PYDSTIISGS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Cre-022746|E3,WD_repeat;UBD,Beta-Prp|Chlamydomonas reinhardtii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TACCTATACA GATGTACATA ACAAAGGCCT TTGCATAGAA AGACTAGAAA ATGAGTTCCT 60
CGCGCTACGC GAAGCTCGGT GCGTCCACGC GAATTGAATT CTTGCGGCAC CTGACAGCGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Cre-022746|E3,WD_repeat;UBD,Beta-Prp|Chlamydomonas reinhardtii
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

KEGG cre:CHLREDRAFT_80954
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000954 Aegilops tauschii 40.59 9.00e-73 267.00
IUUC-Aml-002187 Ailuropoda melanoleuca 40.13 4.00e-66 244.00
IUUC-Atr-002899 Amborella trichopoda 45.33 2.00e-82 298.00
IUUC-Apl-003305 Anas platyrhynchos 39.38 2.00e-68 251.00
IUUC-Aca-004635 Anolis carolinensis 41.64 5.00e-64 237.00
IUUC-Aly-005711 Arabidopsis lyrata 42.21 1.00e-79 289.00
IUUC-Ath-007606 Arabidopsis thaliana 42.21 8.00e-80 290.00
IUUC-Bta-012527 Bos taurus 41.81 2.00e-69 254.00
IUUC-Bdi-014652 Brachypodium distachyon 44.16 1.00e-82 299.00
IUUC-Bol-016374 Brassica oleracea 42.86 3.00e-79 288.00
IUUC-Bra-017068 Brassica rapa 40.90 1.00e-78 286.00
IUUC-Cja-019706 Callithrix jacchus 41.47 5.00e-68 250.00
IUUC-Cfa-020139 Canis familiaris 34.93 2.00e-59 221.00
IUUC-Cpo-021710 Cavia porcellus 41.81 3.00e-69 254.00
IUUC-Csa-023546 Chlorocebus sabaeus 41.78 2.00e-67 248.00
IUUC-Cin-025156 Ciona intestinalis 36.24 1.00e-54 206.00
IUUC-Csv-025962 Ciona savignyi 35.69 3.00e-54 203.00
IUUC-Dre-028215 Danio rerio 37.67 1.00e-61 229.00
IUUC-Dno-029314 Dasypus novemcinctus 41.14 4.00e-68 250.00
IUUC-Dor-030482 Dipodomys ordii 41.47 8.00e-69 253.00
IUUC-Dme-032188 Drosophila melanogaster 32.48 3.00e-45 174.00
IUUC-Eca-034143 Equus caballus 41.47 6.00e-66 243.00
IUUC-Fca-035924 Felis catus 41.14 1.00e-68 252.00
IUUC-Fal-037387 Ficedula albicollis 43.46 2.00e-72 265.00
IUUC-Gmo-038692 Gadus morhua 40.00 7.00e-67 246.00
IUUC-Gga-040597 Gallus gallus 40.85 1.00e-68 252.00
IUUC-Gac-042004 Gasterosteus aculeatus 40.00 2.00e-68 251.00
IUUC-Gma-044134 Glycine max 43.69 1.00e-78 286.00
IUUC-Ggo-044761 Gorilla gorilla 41.47 3.00e-68 251.00
IUUC-Hsa-045698 Homo sapiens 41.47 1.00e-68 252.00
IUUC-Hvu-047649 Hordeum vulgare 44.95 2.00e-83 301.00
IUUC-Itr-048697 Ictidomys tridecemlineatus 41.47 1.00e-68 252.00
IUUC-Lch-049674 Latimeria chalumnae 43.00 8.00e-71 259.00
IUUC-Lpe-051554 Leersia perrieri 44.34 4.00e-84 304.00
IUUC-Loc-052623 Lepisosteus oculatus 41.99 2.00e-65 242.00
IUUC-Laf-054587 Loxodonta africana 41.81 2.00e-68 251.00
IUUC-Mcc-055851 Macaca mulatta 41.47 3.00e-68 251.00
IUUC-Meu-056704 Macropus eugenii 41.47 4.00e-68 250.00
IUUC-Mtr-058053 Medicago truncatula 43.04 3.00e-83 301.00
IUUC-Mga-059608 Meleagris gallopavo 40.33 9.00e-68 249.00
IUUC-Mmr-061154 Microcebus murinus 40.49 4.00e-69 254.00
IUUC-Mdo-062365 Monodelphis domestica 41.81 1.00e-68 252.00
IUUC-Mmu-063754 Mus musculus 40.12 6.00e-69 253.00
IUUC-Mac-065100 Musa acuminata 42.15 6.00e-82 296.00
IUUC-Mpu-066245 Mustela putorius furo 41.14 2.00e-68 251.00
IUUC-Mlu-067692 Myotis lucifugus 41.81 2.00e-68 251.00
IUUC-Nle-070051 Nomascus leucogenys 41.14 1.00e-67 249.00
IUUC-Opr-070855 Ochotona princeps 40.80 1.00e-67 249.00
IUUC-Ont-071883 Oreochromis niloticus 40.33 2.00e-68 251.00
IUUC-Oan-073293 Ornithorhynchus anatinus 43.06 1.00e-67 249.00
IUUC-Ocu-074644 Oryctolagus cuniculus 41.47 8.00e-69 253.00
IUUC-Oba-075448 Oryza barthii 42.99 3.00e-86 311.00
IUUC-Obr-076385 Oryza brachyantha 44.66 6.00e-85 307.00
IUUC-Ogl-077427 Oryza glaberrima 45.31 5.00e-86 310.00
IUUC-Ogu-079022 Oryza glumaepatula 41.38 2.00e-76 278.00
IUUC-Oin-079811 Oryza indica 45.67 9.00e-85 306.00
IUUC-Olo-080245 Oryza longistaminata 45.67 1.00e-84 306.00
IUUC-Ome-081239 Oryza meridionalis 46.03 9.00e-86 309.00
IUUC-Oni-082640 Oryza nivara 42.99 3.00e-86 311.00
IUUC-Opu-083748 Oryza punctata 44.98 2.00e-85 308.00
IUUC-Oru-084609 Oryza rufipogon 42.99 3.00e-86 311.00
IUUC-Osa-086267 Oryza sativa 41.07 3.00e-76 278.00
IUUC-Ola-087483 Oryzias latipes 41.39 5.00e-68 250.00
IUUC-Oga-087964 Otolemur garnettii 41.47 1.00e-68 252.00
IUUC-Oar-089483 Ovis aries 41.47 3.00e-68 251.00
IUUC-Ptr-091387 Pan troglodytes 41.47 1.00e-68 252.00
IUUC-Pan-092623 Papio anubis 41.47 3.00e-68 251.00
IUUC-Psi-093830 Pelodiscus sinensis 42.36 3.00e-67 247.00
IUUC-Ppa-095379 Physcomitrella patens 44.04 6.00e-77 280.00
IUUC-Pfo-096755 Poecilia formosa 40.00 8.00e-67 246.00
IUUC-Pab-097564 Pongo abelii 41.47 5.00e-68 250.00
IUUC-Pop-099149 Populus trichocarpa 43.27 2.00e-82 298.00
IUUC-Pca-100357 Procavia capensis 43.50 2.00e-49 188.00
IUUC-Ppe-101237 Prunus persica 43.04 5.00e-83 300.00
IUUC-Pva-102397 Pteropus vampyrus 37.46 4.00e-56 210.00
IUUC-Rno-105349 Rattus norvegicus 40.12 4.00e-69 254.00
IUUC-Smo-109409 Selaginella moellendorffii 45.03 2.00e-80 291.00
IUUC-Sit-110360 Setaria italica 44.98 4.00e-85 307.00
IUUC-Sly-110991 Solanum lycopersicum 43.91 1.00e-77 282.00
IUUC-Stu-112053 Solanum tuberosum 43.91 2.00e-82 298.00
IUUC-Sar-112953 Sorex araneus 36.44 2.00e-37 149.00
IUUC-Sbi-114389 Sorghum bicolor 40.18 6.00e-76 277.00
IUUC-Ssc-115949 Sus scrofa 39.52 2.00e-31 128.00
IUUC-Tgu-117461 Taeniopygia guttata 43.46 1.00e-72 265.00
IUUC-Tru-117865 Takifugu rubripes 41.33 4.00e-69 254.00
IUUC-Tsy-119036 Tarsius syrichta 43.59 1.00e-26 112.00
IUUC-Tni-120903 Tetraodon nigroviridis 40.86 2.00e-67 248.00
IUUC-Tca-121185 Theobroma cacao 43.59 3.00e-82 298.00
IUUC-Tae-125263 Triticum aestivum 42.98 8.00e-84 303.00
IUUC-Tur-126181 Triticum urartu 40.47 4.00e-78 284.00
IUUC-Ttr-128172 Tursiops truncatus 41.47 9.00e-69 253.00
IUUC-Vvi-131489 Vitis vinifera 43.04 1.00e-82 299.00
IUUC-Xtr-132915 Xenopus tropicalis 43.05 4.00e-66 243.00
IUUC-Xma-134133 Xiphophorus maculatus 39.67 3.00e-65 241.00
Created Date 25-Jun-2017

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