iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099172

Ensembl Protein ID

POPTR_0001s17450.1

UniProt Accession

B9GKZ1; B9GKZ1_POPTR

Genbank Protein ID

EEE82921.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_829514; POPTR_0001s17450g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s17450	POPTR_0001s17450.1	POPTR_0001s17450.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-29	101.8	268	299
UBD/Beta-Prp	3.30e-42	145.8	28	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           gH ++v+cl+f ++   + +sGs Dgti++W l
   Q: 268  GHHGPVHCLRFsPGgeSY-ASGSEDGTIRIWQL 299
           899*********665567.************86 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdkl 109
           +pd+ +l+++s+d++  + + +tg+ + +++gh+++v++++++ ++   ++gs D  +k+wd  tg+ +++++ h++ v++++fs++++ l
   Q: 28   TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASGSADFSAKLWDALTGDELQSFE-HKHIVRACAFSEDTHLL 117
           78999999999999999999999999****************99999999999******************99.999*********99*** PP
   S: 110  vsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgs 199
           ++G+  +++r++dl+        +++   ++ +++ +h+d+ +l s+++ + vrlWd+++gk+++tl+   +++v+s +++++g+++ + +
   Q: 118  LTGGFEKILRIFDLNRPDAPPReVDNSPGSIRTVAWLHSDQTILSSCADIGGVRLWDIRSGKIVQTLET--KSPVTSAEVSQDGRYITT-A 205
           ***********99988776666255555555555555666677777777799**************975..999*****9999977655.5 PP
   S: 200  ldgtvklwdlqt 211
           + +tvk+wd  +
   Q: 206  DGSTVKFWDANH 217
           679999999875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDKKKVAVPL VCHGHSRPVV DLFYSPVTPD GFFLISASKD SSPMLRNGET GDWIGTFEGH 60
KGAVWSCCLD TNALRAASGS ADFSAKLWDA LTGDELQSFE HKHIVRACAF SEDTHLLLTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTTTCATT TGATTTTTGT TTCTTTTTTA ATATATCACT AAAACTCTGT TTCATAGAAA 60
ACAATTTATA TAGCCTTAAC AAGAGAAAAT CATAGCTTTA GCCAGCAACA TTCCCTGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s17450g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002091	Ailuropoda melanoleuca	47.70	6.00e-75	273.00
IUUC-Apl-003327	Anas platyrhynchos	48.08	5.00e-64	237.00
IUUC-Aca-005324	Anolis carolinensis	49.66	1.00e-76	279.00
IUUC-Aly-006421	Arabidopsis lyrata	83.43	4.00e-173	599.00
IUUC-Ath-006574	Arabidopsis thaliana	83.14	2.00e-172	597.00
IUUC-Acl-008014	Aspergillus clavatus	41.54	2.00e-55	208.00
IUUC-Afl-008701	Aspergillus flavus	39.66	7.00e-45	174.00
IUUC-Afu-008942	Aspergillus fumigatus	33.79	8.00e-44	170.00
IUUC-Ani-009394	Aspergillus nidulans	40.74	7.00e-56	210.00
IUUC-Ang-009593	Aspergillus niger	39.73	4.00e-43	168.00
IUUC-Aor-010206	Aspergillus oryzae	41.52	5.00e-58	217.00
IUUC-Ame-011328	Astyanax mexicanus	51.03	1.00e-77	283.00
IUUC-Bgr-012308	Blumeria graminis	39.53	1.00e-62	232.00
IUUC-Bta-013429	Bos taurus	50.00	1.00e-77	283.00
IUUC-Bci-013803	Botrytis cinerea	37.61	1.00e-55	209.00
IUUC-Bol-016600	Brassica oleracea	82.29	4.00e-170	589.00
IUUC-Bra-017775	Brassica rapa	79.34	2.00e-164	572.00
IUUC-Cja-018740	Callithrix jacchus	47.37	3.00e-74	271.00
IUUC-Cfa-021145	Canis familiaris	50.00	6.00e-78	283.00
IUUC-Cpo-022373	Cavia porcellus	49.83	2.00e-78	285.00
IUUC-Csa-023098	Chlorocebus sabaeus	50.00	1.00e-77	282.00
IUUC-Cho-024856	Choloepus hoffmanni	44.33	3.00e-61	228.00
IUUC-Cin-025541	Ciona intestinalis	51.37	4.00e-82	297.00
IUUC-Csv-026287	Ciona savignyi	50.17	4.00e-81	293.00
IUUC-Cgl-026513	Colletotrichum gloeosporioides	38.58	4.00e-52	197.00
IUUC-Cne-026869	Cryptococcus neoformans	45.25	4.00e-69	254.00
IUUC-Dre-028457	Danio rerio	51.72	3.00e-81	294.00
IUUC-Dno-029213	Dasypus novemcinctus	50.69	1.00e-78	286.00
IUUC-Dse-031350	Dothistroma septosporum	39.10	4.00e-57	214.00
IUUC-Ete-032558	Echinops telfairi	41.57	4.00e-48	184.00
IUUC-Eca-033934	Equus caballus	50.00	7.00e-78	283.00
IUUC-Eeu-034650	Erinaceus europaeus	41.03	2.00e-61	228.00
IUUC-Fca-035909	Felis catus	50.00	1.00e-76	279.00
IUUC-Fal-036706	Ficedula albicollis	47.62	4.00e-64	237.00
IUUC-Fox-037780	Fusarium oxysporum	39.94	3.00e-54	204.00
IUUC-Fso-038197	Fusarium solani	39.75	2.00e-49	189.00
IUUC-Gmo-039707	Gadus morhua	49.66	6.00e-76	276.00
IUUC-Ggr-040054	Gaeumannomyces graminis	36.62	3.00e-52	198.00
IUUC-Gga-040901	Gallus gallus	50.69	8.00e-78	283.00
IUUC-Hsa-046553	Homo sapiens	47.70	8.00e-75	273.00
IUUC-Hvu-047544	Hordeum vulgare	80.47	1.00e-167	581.00
IUUC-Itr-047980	Ictidomys tridecemlineatus	50.00	7.00e-78	283.00
IUUC-Lch-050078	Latimeria chalumnae	51.20	5.00e-80	290.00
IUUC-Loc-052598	Lepisosteus oculatus	51.72	5.00e-80	290.00
IUUC-Lma-053226	Leptosphaeria maculans	43.13	9.00e-57	213.00
IUUC-Laf-054053	Loxodonta africana	50.69	5.00e-79	287.00
IUUC-Mcc-054652	Macaca mulatta	47.54	1.00e-74	272.00
IUUC-Mor-057256	Magnaporthe oryzae	37.04	3.00e-51	194.00
IUUC-Mpo-057303	Magnaporthe poae	36.70	1.00e-52	199.00
IUUC-Mga-059664	Meleagris gallopavo	50.52	2.00e-76	278.00
IUUC-Mvi-060534	Microbotryum violaceum	34.33	7.00e-40	157.00
IUUC-Mmr-061044	Microcebus murinus	50.00	8.00e-78	283.00
IUUC-Mdo-063019	Monodelphis domestica	49.14	4.00e-76	277.00
IUUC-Mmu-064092	Mus musculus	50.00	1.00e-77	283.00
IUUC-Mpu-066557	Mustela putorius furo	50.00	7.00e-78	283.00
IUUC-Mlu-068179	Myotis lucifugus	50.00	2.00e-78	285.00
IUUC-Nfi-068553	Neosartorya fischeri	40.92	7.00e-55	207.00
IUUC-Ncr-068934	Neurospora crassa	38.97	5.00e-51	194.00
IUUC-Nle-069482	Nomascus leucogenys	47.37	3.00e-74	271.00
IUUC-Opr-071055	Ochotona princeps	38.57	2.00e-46	179.00
IUUC-Ocu-074942	Oryctolagus cuniculus	50.00	7.00e-78	283.00
IUUC-Ola-086704	Oryzias latipes	51.20	1.00e-78	285.00
IUUC-Olu-087796	Ostreococcus lucimarinus	59.45	6.00e-103	366.00
IUUC-Oga-088932	Otolemur garnettii	43.30	6.00e-51	193.00
IUUC-Oar-090398	Ovis aries	50.00	7.00e-78	283.00
IUUC-Ptr-091202	Pan troglodytes	50.00	1.00e-77	282.00
IUUC-Pan-091948	Papio anubis	50.00	1.00e-77	282.00
IUUC-Psi-093863	Pelodiscus sinensis	47.74	7.00e-66	243.00
IUUC-Pma-094255	Petromyzon marinus	48.62	7.00e-74	270.00
IUUC-Pno-095075	Phaeosphaeria nodorum	44.23	5.00e-59	220.00
IUUC-Pfo-096438	Poecilia formosa	52.41	8.00e-81	293.00
IUUC-Pab-097994	Pongo abelii	50.00	9.00e-78	283.00
IUUC-Pte-104245	Pyrenophora teres	43.27	1.00e-59	222.00
IUUC-Pyt-104537	Pyrenophora triticirepentis	43.27	1.00e-59	222.00
IUUC-Rno-105712	Rattus norvegicus	50.00	8.00e-78	283.00
IUUC-Sha-107568	Sarcophilus harrisii	49.14	7.00e-76	276.00
IUUC-Ssl-108655	Sclerotinia sclerotiorum	37.90	2.00e-55	209.00
IUUC-Sit-110760	Setaria italica	81.76	4.00e-171	593.00
IUUC-Sly-111555	Solanum lycopersicum	81.05	3.00e-170	590.00
IUUC-Stu-111953	Solanum tuberosum	81.63	3.00e-171	593.00
IUUC-Sar-113491	Sorex araneus	43.55	2.00e-41	161.00
IUUC-Sbi-113932	Sorghum bicolor	83.53	5.00e-173	599.00
IUUC-Ssc-116392	Sus scrofa	47.37	5.00e-74	270.00
IUUC-Tgu-116835	Taeniopygia guttata	48.09	3.00e-63	234.00
IUUC-Tre-122163	Trichoderma reesei	37.50	9.00e-47	179.00
IUUC-Tvi-122609	Trichoderma virens	37.96	4.00e-51	194.00
IUUC-Tbe-127324	Tupaia belangeri	35.40	8.00e-24	103.00
IUUC-Ttr-128202	Tursiops truncatus	50.00	1.00e-77	282.00
IUUC-Uma-129433	Ustilago maydis	44.19	5.00e-63	234.00
IUUC-Vda-129675	Verticillium dahliae	39.09	1.00e-53	202.00
IUUC-Vpa-130382	Vicugna pacos	50.00	6.00e-78	283.00
IUUC-Xma-133969	Xiphophorus maculatus	48.28	3.00e-71	261.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence