iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074479

Ensembl Protein ID

ENSOCUP00000002506.3

UniProt Accession

G1SIJ5; G1SIJ5_RABIT

Genbank Protein ID

ENSOCUP00000002506

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02026316

Gene Name

LYST

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000002867.3	ENSOCUT00000002884.3	ENSOCUP00000002506.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-06	26.7	3657	3689

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           gHt+++t+l f   +  +++s s+Dgt+ +WDl 
   Q: 3657 GHTEEITSL-FvckPYSIMISVSRDGTCIIWDLN 3689
           8********.998755789*************85 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MSTDSNSLAR EFLTDVNQLC NAVVQRVEAR EEEEEETHMA TLGQYLVHGR GFLLLTKLNS 60
IIDQALTCRE ELLTLLLSLL PLVWKIPVQE EKAIDFNLPL SADIILTKEK NSSSHKSTQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCAGCAGC TGGGCCCGCC TTTCTCCTTT CCCCATTGGC TCGGCCTCTC CGTGCGTCAA 60
CACCTGCGAC GCTAGCGTTA CCCTCCCAGC GGCGGGCGGG GCACGGGGCG CGGCGAGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000409--BEACH_dom
IPR030464--LYST
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0015630--C:microtubule cytoskeleton
GO:0032510--P:endosome to lysosome transport via multivesicular body sorting pathway
GO:0007040--P:lysosome organization
GO:0042267--P:natural killer cell mediated cytotoxicity
GO:0043473--P:pigmentation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002188	Ailuropoda melanoleuca	88.10	0.00e+00	6849.00
IUUC-Apl-003779	Anas platyrhynchos	71.37	0.00e+00	5383.00
IUUC-Ame-010834	Astyanax mexicanus	60.54	0.00e+00	4478.00
IUUC-Bta-013274	Bos taurus	87.90	0.00e+00	6747.00
IUUC-Cja-019682	Callithrix jacchus	89.85	0.00e+00	6882.00
IUUC-Cfa-020625	Canis familiaris	87.54	0.00e+00	6669.00
IUUC-Cpo-022515	Cavia porcellus	83.92	0.00e+00	6405.00
IUUC-Csa-023804	Chlorocebus sabaeus	89.96	0.00e+00	6889.00
IUUC-Cin-025176	Ciona intestinalis	45.01	9.00e-86	310.00
IUUC-Csv-026108	Ciona savignyi	53.27	0.00e+00	713.00
IUUC-Dre-027544	Danio rerio	64.30	0.00e+00	3455.00
IUUC-Dno-029030	Dasypus novemcinctus	85.63	0.00e+00	6611.00
IUUC-Dor-031065	Dipodomys ordii	79.29	0.00e+00	2858.00
IUUC-Eca-034391	Equus caballus	87.62	0.00e+00	6752.00
IUUC-Fal-037194	Ficedula albicollis	70.55	0.00e+00	5308.00
IUUC-Gmo-039256	Gadus morhua	71.96	0.00e+00	2282.00
IUUC-Gga-040318	Gallus gallus	71.11	0.00e+00	5331.00
IUUC-Gac-042425	Gasterosteus aculeatus	60.55	0.00e+00	4401.00
IUUC-Ggo-045550	Gorilla gorilla	89.86	0.00e+00	6888.00
IUUC-Hsa-046612	Homo sapiens	90.26	0.00e+00	6945.00
IUUC-Laf-054133	Loxodonta africana	87.43	0.00e+00	6651.00
IUUC-Mcc-055373	Macaca mulatta	90.24	0.00e+00	6945.00
IUUC-Mga-059475	Meleagris gallopavo	69.33	0.00e+00	5164.00
IUUC-Mmr-061795	Microcebus murinus	90.16	0.00e+00	6872.00
IUUC-Mlu-067930	Myotis lucifugus	82.18	0.00e+00	3701.00
IUUC-Nle-069205	Nomascus leucogenys	89.33	0.00e+00	6799.00
IUUC-Ont-071764	Oreochromis niloticus	61.26	0.00e+00	4392.00
IUUC-Ptr-091393	Pan troglodytes	90.27	0.00e+00	6935.00
IUUC-Pan-092369	Papio anubis	90.14	0.00e+00	6902.00
IUUC-Pfo-096100	Poecilia formosa	59.89	0.00e+00	4321.00
IUUC-Pab-098733	Pongo abelii	89.07	0.00e+00	6786.00
IUUC-Pca-100429	Procavia capensis	78.57	0.00e+00	1793.00
IUUC-Sha-106595	Sarcophilus harrisii	72.28	0.00e+00	5289.00
IUUC-Sar-113059	Sorex araneus	77.52	0.00e+00	1823.00
IUUC-Ssc-115879	Sus scrofa	81.55	0.00e+00	6077.00
IUUC-Tru-118616	Takifugu rubripes	59.75	0.00e+00	4328.00
IUUC-Tsy-119568	Tarsius syrichta	85.76	0.00e+00	4132.00
IUUC-Tni-120782	Tetraodon nigroviridis	59.30	0.00e+00	4323.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence