iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135506

Ensembl Protein ID

Zm00001d039528_T001

UniProt Accession

A0A1D6MI05; A0A1D6MI05_MAIZE

Genbank Protein ID

ONM29063.1

Protein Name

Protein HIRA

Genbank Nucleotide ID

CM007649

Gene Name

ZEAMMB73_Zm00001d039528

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d039528	Zm00001d039528_T001	Zm00001d039528_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-20	72.9	123	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt++v +l++ +d  +l+sGs D+ti++W++  g ++
   Q: 123  GHTADVVDLSWsPDdSTLASGSLDNTIHIWNMNNGICT 160
           8***********77799**************9888775 PP

Organism

Zea mays

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MILEKPSWIR HEGLQIFSID IQTGGLRFAT GGGDQKVRIW SMESVHKDNT NNDSKQRLLA 60
TLRDHFGSVN CVRWAKHGRY LASGSDDQVI LIHERKAGSG TSEFGSGEPP DAENWKVIMT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGACCTTCGC CTCCGACTCG GACAGTTCGA CTCGAACCCT AACGCCGGCT GCCGAGGTCG 60
CAGCGTCACC GTCAGGCGCG CCACGTGAAC GCCTGCGGCT TGCTGGTCGC GGTCTCTCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afl-008591	Aspergillus flavus	25.34	4.00e-86	312.00
IUUC-Afu-008781	Aspergillus fumigatus	25.48	8.00e-82	298.00
IUUC-Ani-009272	Aspergillus nidulans	24.42	5.00e-73	269.00
IUUC-Ang-009655	Aspergillus niger	26.06	2.00e-87	317.00
IUUC-Aor-010119	Aspergillus oryzae	25.30	1.00e-85	310.00
IUUC-Ate-010530	Aspergillus terreus	24.02	4.00e-73	269.00
IUUC-Bgr-012237	Blumeria graminis	34.24	3.00e-65	243.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	31.09	1.00e-67	251.00
IUUC-Dre-027655	Danio rerio	36.11	2.00e-85	310.00
IUUC-Dme-031746	Drosophila melanogaster	40.33	4.00e-86	312.00
IUUC-Fox-037906	Fusarium oxysporum	34.91	2.00e-70	259.00
IUUC-Gmo-039151	Gadus morhua	35.65	5.00e-82	298.00
IUUC-Gac-041405	Gasterosteus aculeatus	34.70	5.00e-81	295.00
IUUC-Kpa-049145	Komagataella pastoris	31.37	4.00e-57	216.00
IUUC-Loc-052119	Lepisosteus oculatus	35.85	3.00e-82	300.00
IUUC-Mor-057090	Magnaporthe oryzae	35.41	2.00e-69	256.00
IUUC-Mvi-060432	Microbotryum violaceum	32.58	1.00e-58	221.00
IUUC-Ncr-068842	Neurospora crassa	36.41	1.00e-71	265.00
IUUC-Ola-087302	Oryzias latipes	35.11	3.00e-80	293.00
IUUC-Pfo-096857	Poecilia formosa	35.09	4.00e-79	289.00
IUUC-Sce-106291	Saccharomyces cerevisiae	34.33	3.00e-63	236.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	28.10	1.00e-91	330.00
IUUC-Spo-108162	Schizosaccharomyces pombe	34.29	2.00e-73	270.00
IUUC-Tru-117590	Takifugu rubripes	35.73	6.00e-87	315.00
IUUC-Tni-119915	Tetraodon nigroviridis	36.29	4.00e-86	312.00
IUUC-Tme-127202	Tuber melanosporum	25.03	3.00e-66	246.00
IUUC-Vda-129844	Verticillium dahliae	33.72	6.00e-68	252.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence