iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003870

Ensembl Protein ID

ENSAPLP00000016157.1

UniProt Accession

R0LGS2; R0LGS2_ANAPL

Genbank Protein ID

EOB00775.1

Protein Name

Protein NEDD1

Genbank Nucleotide ID

ADON01077910

Gene Name

NEDD1; Anapl_11141

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000016247.1	ENSAPLT00000016970.1	ENSAPLP00000016157.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-22	78.4	81	108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrt 32
           tc+++ s+  +++sG+ D+t+ +WDl++
   Q: 81   TCVSLnSSsLYIASGGLDNTVNIWDLKS 108
           79999855599**************987 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

MPEGVRFASA GDDVKIWDSS SLTVVEQFNP HASPHLVSSL CWASNNSFLV TASAVGDKIV 60
VSSCKSKPAP LFEIAEGAKQ TCVSLNSSSL YIASGGLDNT VNIWDLKSRR VHRCLKDHKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAGAAG GCGTACGTTT TGCTTCAGCT GGAGATGACG TTAAAATATG GGATTCCTCC 60
TCTCTAACCG TGGTGGAGCA GTTCAACCCG CACGCGTCCC CGCATCTAGT CAGCTCACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045177--C:apical part of cell
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	35.71	1.00e-16	81.60
IUUC-Aml-002397	Ailuropoda melanoleuca	64.99	0.00e+00	859.00
IUUC-Atr-002464	Amborella trichopoda	32.23	2.00e-38	153.00
IUUC-Aca-004925	Anolis carolinensis	67.31	0.00e+00	879.00
IUUC-Aly-005931	Arabidopsis lyrata	31.94	1.00e-37	151.00
IUUC-Ath-006681	Arabidopsis thaliana	31.94	1.00e-37	151.00
IUUC-Ame-010906	Astyanax mexicanus	45.15	1.00e-146	513.00
IUUC-Bta-013389	Bos taurus	66.62	0.00e+00	867.00
IUUC-Bdi-014340	Brachypodium distachyon	31.76	2.00e-37	150.00
IUUC-Bol-016282	Brassica oleracea	33.23	5.00e-39	155.00
IUUC-Bra-017178	Brassica rapa	33.64	1.00e-39	157.00
IUUC-Cja-019541	Callithrix jacchus	64.94	0.00e+00	850.00
IUUC-Cfa-021218	Canis familiaris	64.35	0.00e+00	848.00
IUUC-Cpo-021697	Cavia porcellus	60.71	0.00e+00	786.00
IUUC-Csa-023620	Chlorocebus sabaeus	65.09	0.00e+00	872.00
IUUC-Cho-025105	Choloepus hoffmanni	58.86	0.00e+00	630.00
IUUC-Cin-025293	Ciona intestinalis	40.40	1.00e-61	230.00
IUUC-Csv-026234	Ciona savignyi	38.49	5.00e-52	197.00
IUUC-Dre-028251	Danio rerio	43.45	2.00e-136	479.00
IUUC-Dno-029281	Dasypus novemcinctus	59.58	0.00e+00	655.00
IUUC-Dor-031020	Dipodomys ordii	60.70	4.00e-77	282.00
IUUC-Ete-033113	Echinops telfairi	67.01	4.00e-147	514.00
IUUC-Eca-034230	Equus caballus	65.44	0.00e+00	846.00
IUUC-Eeu-034671	Erinaceus europaeus	54.90	8.00e-163	566.00
IUUC-Fca-035775	Felis catus	65.09	0.00e+00	872.00
IUUC-Fal-037557	Ficedula albicollis	82.99	0.00e+00	1057.00
IUUC-Gmo-038586	Gadus morhua	58.44	9.00e-100	357.00
IUUC-Gga-040153	Gallus gallus	88.38	0.00e+00	1202.00
IUUC-Gac-041385	Gasterosteus aculeatus	43.71	1.00e-132	466.00
IUUC-Gma-043049	Glycine max	32.46	5.00e-41	162.00
IUUC-Ggo-044576	Gorilla gorilla	65.83	0.00e+00	890.00
IUUC-Hsa-046198	Homo sapiens	66.03	0.00e+00	890.00
IUUC-Hvu-047794	Hordeum vulgare	35.71	7.00e-17	79.30
IUUC-Lch-050561	Latimeria chalumnae	51.63	6.00e-162	563.00
IUUC-Lpe-051469	Leersia perrieri	30.74	1.00e-35	144.00
IUUC-Loc-052816	Lepisosteus oculatus	50.92	1.00e-161	563.00
IUUC-Laf-053880	Loxodonta africana	62.48	0.00e+00	805.00
IUUC-Mcc-054977	Macaca mulatta	65.53	0.00e+00	876.00
IUUC-Meu-056141	Macropus eugenii	51.84	7.00e-149	520.00
IUUC-Mtr-058441	Medicago truncatula	32.46	1.00e-39	157.00
IUUC-Mga-060141	Meleagris gallopavo	86.21	0.00e+00	1154.00
IUUC-Mmr-061201	Microcebus murinus	65.23	0.00e+00	871.00
IUUC-Mdo-061855	Monodelphis domestica	62.54	0.00e+00	805.00
IUUC-Mmu-064342	Mus musculus	64.64	0.00e+00	843.00
IUUC-Mac-065368	Musa acuminata	32.46	2.00e-36	147.00
IUUC-Mpu-066191	Mustela putorius furo	64.20	0.00e+00	853.00
IUUC-Mlu-067310	Myotis lucifugus	64.59	0.00e+00	853.00
IUUC-Nle-069990	Nomascus leucogenys	65.98	0.00e+00	894.00
IUUC-Opr-070336	Ochotona princeps	60.21	0.00e+00	753.00
IUUC-Ont-071675	Oreochromis niloticus	44.15	3.00e-136	478.00
IUUC-Oan-072772	Ornithorhynchus anatinus	65.30	0.00e+00	729.00
IUUC-Ocu-074095	Oryctolagus cuniculus	66.27	0.00e+00	869.00
IUUC-Oba-075327	Oryza barthii	31.08	4.00e-37	149.00
IUUC-Obr-076119	Oryza brachyantha	31.08	3.00e-37	149.00
IUUC-Ogl-077820	Oryza glaberrima	30.74	2.00e-36	147.00
IUUC-Ogu-078679	Oryza glumaepatula	31.08	4.00e-37	149.00
IUUC-Oin-079891	Oryza indica	31.08	3.00e-37	150.00
IUUC-Olo-080414	Oryza longistaminata	34.13	5.00e-35	142.00
IUUC-Ome-081888	Oryza meridionalis	31.08	5.00e-37	149.00
IUUC-Oni-082417	Oryza nivara	31.08	4.00e-37	149.00
IUUC-Opu-083393	Oryza punctata	31.08	3.00e-37	149.00
IUUC-Oru-084698	Oryza rufipogon	31.08	2.00e-37	150.00
IUUC-Osa-086121	Oryza sativa	31.08	4.00e-37	149.00
IUUC-Ola-086806	Oryzias latipes	43.00	6.00e-145	507.00
IUUC-Olu-087591	Ostreococcus lucimarinus	26.64	2.00e-14	73.60
IUUC-Oga-088622	Otolemur garnettii	64.90	0.00e+00	861.00
IUUC-Oar-090391	Ovis aries	62.28	0.00e+00	719.00
IUUC-Ptr-091036	Pan troglodytes	65.53	0.00e+00	885.00
IUUC-Pan-092576	Papio anubis	65.53	0.00e+00	877.00
IUUC-Psi-093450	Pelodiscus sinensis	75.52	0.00e+00	990.00
IUUC-Pma-094101	Petromyzon marinus	52.32	3.00e-96	344.00
IUUC-Ppa-095636	Physcomitrella patens	32.90	3.00e-40	159.00
IUUC-Pfo-097142	Poecilia formosa	43.30	5.00e-137	481.00
IUUC-Pab-097829	Pongo abelii	65.83	0.00e+00	889.00
IUUC-Pop-099687	Populus trichocarpa	33.11	2.00e-40	160.00
IUUC-Pca-100217	Procavia capensis	63.79	6.00e-150	524.00
IUUC-Ppe-101502	Prunus persica	33.22	7.00e-40	158.00
IUUC-Pva-102736	Pteropus vampyrus	63.91	0.00e+00	856.00
IUUC-Rno-104977	Rattus norvegicus	62.76	0.00e+00	807.00
IUUC-Sha-107003	Sarcophilus harrisii	62.48	0.00e+00	819.00
IUUC-Smo-109002	Selaginella moellendorffii	32.27	1.00e-38	154.00
IUUC-Sit-109796	Setaria italica	30.82	2.00e-36	147.00
IUUC-Sly-110941	Solanum lycopersicum	31.89	3.00e-37	149.00
IUUC-Stu-112314	Solanum tuberosum	32.56	9.00e-38	151.00
IUUC-Sar-112926	Sorex araneus	58.20	0.00e+00	749.00
IUUC-Sbi-113822	Sorghum bicolor	32.93	2.00e-25	110.00
IUUC-Ssc-116242	Sus scrofa	68.75	2.00e-148	518.00
IUUC-Tgu-116765	Taeniopygia guttata	80.15	0.00e+00	1065.00
IUUC-Tru-117738	Takifugu rubripes	43.48	1.00e-149	523.00
IUUC-Tsy-118856	Tarsius syrichta	64.18	0.00e+00	789.00
IUUC-Tni-120871	Tetraodon nigroviridis	44.26	3.00e-151	528.00
IUUC-Tca-120965	Theobroma cacao	32.56	3.00e-39	156.00
IUUC-Tae-124830	Triticum aestivum	31.42	1.00e-38	154.00
IUUC-Tur-126840	Triticum urartu	31.42	1.00e-38	154.00
IUUC-Ttr-128551	Tursiops truncatus	63.76	0.00e+00	830.00
IUUC-Vpa-130324	Vicugna pacos	66.27	0.00e+00	868.00
IUUC-Vvi-131699	Vitis vinifera	33.22	5.00e-40	159.00
IUUC-Xtr-131956	Xenopus tropicalis	60.39	0.00e+00	794.00
IUUC-Xma-132982	Xiphophorus maculatus	43.87	2.00e-137	482.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence