iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113923

Ensembl Protein ID

Sb01g019530.1

UniProt Accession

A0A1B6QKC0; A0A1B6QKC0_SORBI

Genbank Protein ID

KXG38349.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G222000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g019530	Sb01g019530.1	Sb01g019530.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-12	46.8	150	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikv 27
           H++s+t++++ ++ ++ ++Gs D++++v
   Q: 150  HSSSITSVDWhPTlPMYITGSADHSVRV 177
           9*********9888777*********97 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKTWKPLTVL PLGEDPPAIT SLCFNHNGKI LAASATDGMI HMFDMSAGLQ ITGWPAHDSP 60
VSSVLFGPAE TSIFSLGSDG KIFEWSLHNQ GQILWSRDCS RFCNPESFKT RMHEIALDSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAACAT GGAAACCATT GGTAGTTCAT TTGCTTTCAT CCTCTTCTCT TGAACTTATA 60
TGTGGATTTT GTAGCCAGTA TCTTTTCTAA AGGCTTTTCC CCTTTTTTTT CCTTCTATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000967	Aegilops tauschii	89.13	5.00e-73	267.00
IUUC-Aml-002391	Ailuropoda melanoleuca	28.93	1.00e-17	84.30
IUUC-Atr-002487	Amborella trichopoda	76.67	5.00e-83	301.00
IUUC-Apl-003180	Anas platyrhynchos	29.95	7.00e-18	85.10
IUUC-Aca-004864	Anolis carolinensis	31.47	4.00e-19	89.00
IUUC-Ame-011815	Astyanax mexicanus	31.00	2.00e-19	90.50
IUUC-Bta-012663	Bos taurus	28.93	2.00e-17	83.20
IUUC-Bdi-014897	Brachypodium distachyon	95.03	1.00e-101	360.00
IUUC-Cja-019999	Callithrix jacchus	29.70	6.00e-18	85.10
IUUC-Cfa-020220	Canis familiaris	29.21	1.00e-16	80.90
IUUC-Cpo-021382	Cavia porcellus	29.44	1.00e-17	84.30
IUUC-Csa-024167	Chlorocebus sabaeus	29.70	1.00e-17	84.30
IUUC-Cho-024992	Choloepus hoffmanni	27.41	1.00e-15	77.80
IUUC-Dre-028313	Danio rerio	30.96	8.00e-20	91.70
IUUC-Dno-029310	Dasypus novemcinctus	29.35	7.00e-17	81.60
IUUC-Dor-030829	Dipodomys ordii	30.43	3.00e-18	86.30
IUUC-Eca-033365	Equus caballus	29.44	2.00e-17	83.60
IUUC-Eeu-035105	Erinaceus europaeus	22.96	4.00e-08	52.80
IUUC-Fca-036235	Felis catus	29.70	6.00e-18	85.10
IUUC-Fal-037261	Ficedula albicollis	29.95	5.00e-20	92.40
IUUC-Gmo-038615	Gadus morhua	30.35	5.00e-16	79.00
IUUC-Gga-040964	Gallus gallus	29.70	1.00e-18	87.40
IUUC-Gac-042279	Gasterosteus aculeatus	32.00	1.00e-17	84.30
IUUC-Gma-044040	Glycine max	80.66	5.00e-85	308.00
IUUC-Ggo-045182	Gorilla gorilla	30.65	1.00e-17	84.30
IUUC-Hsa-046466	Homo sapiens	29.70	9.00e-18	84.70
IUUC-Hvu-047786	Hordeum vulgare	91.95	5.00e-95	338.00
IUUC-Itr-048100	Ictidomys tridecemlineatus	28.71	2.00e-17	83.60
IUUC-Lpe-051583	Leersia perrieri	92.86	2.00e-44	172.00
IUUC-Loc-051750	Lepisosteus oculatus	31.00	3.00e-18	86.30
IUUC-Laf-054030	Loxodonta africana	30.35	3.00e-18	86.30
IUUC-Mcc-055794	Macaca mulatta	29.70	1.00e-17	84.30
IUUC-Mtr-058260	Medicago truncatula	80.66	2.00e-85	308.00
IUUC-Mga-060166	Meleagris gallopavo	29.70	2.00e-18	87.00
IUUC-Mmr-061054	Microcebus murinus	30.20	8.00e-19	88.20
IUUC-Mdo-061860	Monodelphis domestica	30.20	2.00e-18	87.00
IUUC-Mmu-063660	Mus musculus	30.10	1.00e-16	80.90
IUUC-Mac-065193	Musa acuminata	82.98	7.00e-91	327.00
IUUC-Mpu-066746	Mustela putorius furo	30.30	4.00e-18	85.90
IUUC-Mlu-068156	Myotis lucifugus	30.20	7.00e-18	85.10
IUUC-Nle-069065	Nomascus leucogenys	29.70	6.00e-18	85.10
IUUC-Opr-070438	Ochotona princeps	30.69	1.00e-18	87.80
IUUC-Ont-072085	Oreochromis niloticus	32.00	3.00e-18	86.30
IUUC-Ocu-074114	Oryctolagus cuniculus	29.70	2.00e-17	84.00
IUUC-Oba-075720	Oryza barthii	92.82	6.00e-98	350.00
IUUC-Obr-076720	Oryza brachyantha	93.92	3.00e-100	358.00
IUUC-Ogl-077157	Oryza glaberrima	94.48	2.00e-100	356.00
IUUC-Ogu-079035	Oryza glumaepatula	92.82	9.00e-98	350.00
IUUC-Oin-079408	Oryza indica	94.48	2.00e-102	365.00
IUUC-Olo-080955	Oryza longistaminata	93.85	4.00e-71	261.00
IUUC-Ome-081897	Oryza meridionalis	93.10	1.00e-93	336.00
IUUC-Oni-082460	Oryza nivara	92.82	7.00e-98	350.00
IUUC-Opu-083172	Oryza punctata	92.27	1.00e-97	349.00
IUUC-Oru-085200	Oryza rufipogon	92.82	9.00e-98	350.00
IUUC-Ola-086613	Oryzias latipes	32.00	2.00e-18	86.30
IUUC-Oga-088368	Otolemur garnettii	29.70	2.00e-17	83.60
IUUC-Oar-089425	Ovis aries	29.95	2.00e-17	83.60
IUUC-Ptr-091643	Pan troglodytes	29.70	1.00e-17	84.30
IUUC-Pan-092395	Papio anubis	29.70	1.00e-17	84.30
IUUC-Psi-093924	Pelodiscus sinensis	29.21	8.00e-18	84.70
IUUC-Pma-094283	Petromyzon marinus	28.93	9.00e-18	84.70
IUUC-Pfo-097225	Poecilia formosa	32.50	2.00e-18	86.70
IUUC-Pab-097993	Pongo abelii	29.70	9.00e-18	84.70
IUUC-Pop-099660	Populus trichocarpa	76.24	6.00e-83	300.00
IUUC-Pca-100904	Procavia capensis	28.64	4.00e-18	85.90
IUUC-Ppe-101828	Prunus persica	87.65	1.00e-38	153.00
IUUC-Pva-102708	Pteropus vampyrus	30.20	1.00e-17	84.30
IUUC-Rno-105110	Rattus norvegicus	29.35	3.00e-16	79.70
IUUC-Sha-107527	Sarcophilus harrisii	30.20	1.00e-18	87.40
IUUC-Smo-108782	Selaginella moellendorffii	51.72	4.00e-28	118.00
IUUC-Sit-109793	Setaria italica	98.90	2.00e-104	370.00
IUUC-Sly-111878	Solanum lycopersicum	76.11	1.00e-82	299.00
IUUC-Ssc-115303	Sus scrofa	29.70	7.00e-18	85.10
IUUC-Tgu-117221	Taeniopygia guttata	28.93	9.00e-19	87.80
IUUC-Tru-117613	Takifugu rubripes	30.61	2.00e-18	87.00
IUUC-Tsy-119336	Tarsius syrichta	28.71	4.00e-17	82.40
IUUC-Tni-120800	Tetraodon nigroviridis	31.63	4.00e-18	85.90
IUUC-Tca-121607	Theobroma cacao	80.11	8.00e-87	313.00
IUUC-Tae-125541	Triticum aestivum	92.82	9.00e-102	363.00
IUUC-Tur-126358	Triticum urartu	90.91	1.00e-51	196.00
IUUC-Tbe-128121	Tupaia belangeri	30.20	5.00e-18	85.50
IUUC-Ttr-128704	Tursiops truncatus	29.44	5.00e-18	85.50
IUUC-Vvi-131495	Vitis vinifera	82.87	1.00e-89	323.00
IUUC-Xtr-132097	Xenopus tropicalis	29.70	3.00e-17	83.20
IUUC-Xma-134237	Xiphophorus maculatus	32.00	2.00e-17	83.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence