iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002594

Ensembl Protein ID

ERN15897

UniProt Accession

U5D397; U5D397_AMBTC

Genbank Protein ID

ERN15897.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392495

Gene Name

AMTR_s00039p00212570

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00039p00212570	ERN15897	ERN15897

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-24	85.3	264	294
E3 activity/RING/U-box	1.00e-12	48.4	2	68
UBD/Beta-Prp	3.30e-50	171.4	222	436

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+ +vt+++f   d ++vs+s D+t++vW 
   Q: 264  GHSKKVTSVKFvpRDEFFVSASADKTVRVWQ 294
           8***********877***************5 PP

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
            C++s+  ++dPvv++ sG  ++++ Ie+++ ++gk cPvt++plt +d+v  +t +++  + +++ s
   Q: 2    FCAVSGVTPEDPVVSKkSGLLFEKRLIERHILDYGK-CPVTGEPLTMDDIVSVKTNKAVKPRPLQAAS 68
           6***********************************.**********************999988766 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvw...dletgqcleetlsghdgvvncvvvhp 147
            + +++ +v+++p++++++tg+ D+++ ++d s+g++++tl+gh+++v+s++f p ++++vs+s+d+t+rvw   +  ++ c + +l+ h++ v+ v++h 
   Q: 222  TNRPGILSVDIHPSKDVIATGGVDANAVLFDRSSGQILSTLSGHSKKVTSVKFVPRDEFFVSASADKTVRVWqgaEDGNYNCRH-ILRDHTAEVQAVTIHA 321
           455666666666666666666666666666666666666666666666666666666666666666666666222233334444.6666666666666666 PP
   S: 148  dgnllvsGslDrtvrlWdlktgkllrtl..........tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlv 238
           + n++v++slD t  ++dl++g +l++           +g +++  +s +f+++g  l  g l   v++wd+++++ v  + gh+ +v+s+ fs+n+ +l+
   Q: 322  THNYFVTASLDDTWCFYDLASGLCLTQVdltkasadefSG-KKGGYTSAAFHPDGLILGVGTLEACVRIWDVKSQSNVANFAGHDGPVNSISFSENGYFLA 421
           6666666666666666666666666655555555555454.666666666666666666666666666666666666666666666666666665555555 PP
   S: 239  sgssDgsiriWdlrsg 254
           +++ D  +++Wdlr+ 
   Q: 422  TAA-DDGVKLWDLRKL 436
           444.555666666654 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MFCAVSGVTP EDPVVSKKSG LLFEKRLIER HILDYGKCPV TGEPLTMDDI VSVKTNKAVK 60
PRPLQAASIP GMLGLFQNEW DALMLSNFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCTGCG CAGGTATAGC TTTACTACTC AGTCCTTACT TTATTTTATT CATTAATGCG 60
GTTTTACTTT ATTCTCATTT TCAGACAATC ATATTTTTGT TGTTTTTCTC ATTTGGATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18444192

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	68.34	0.00e+00	733.00
IUUC-Aml-001230	Ailuropoda melanoleuca	42.59	4.00e-108	383.00
IUUC-Apl-003686	Anas platyrhynchos	42.66	3.00e-85	307.00
IUUC-Aca-005272	Anolis carolinensis	44.32	2.00e-114	405.00
IUUC-Aly-005586	Arabidopsis lyrata	69.17	0.00e+00	759.00
IUUC-Ath-007693	Arabidopsis thaliana	68.80	0.00e+00	750.00
IUUC-Ago-007879	Ashbya gossypii	27.22	3.00e-32	131.00
IUUC-Acl-008335	Aspergillus clavatus	33.76	6.00e-60	224.00
IUUC-Afl-008527	Aspergillus flavus	33.54	1.00e-63	236.00
IUUC-Afu-008957	Aspergillus fumigatus	34.84	5.00e-69	253.00
IUUC-Ani-009280	Aspergillus nidulans	33.67	6.00e-61	227.00
IUUC-Ang-009746	Aspergillus niger	33.26	2.00e-65	242.00
IUUC-Aor-009905	Aspergillus oryzae	33.13	1.00e-65	242.00
IUUC-Ate-010412	Aspergillus terreus	34.57	4.00e-61	227.00
IUUC-Ame-011561	Astyanax mexicanus	40.45	8.00e-43	166.00
IUUC-Bgr-012283	Blumeria graminis	29.52	6.00e-49	187.00
IUUC-Bta-013242	Bos taurus	44.23	2.00e-114	404.00
IUUC-Bci-013901	Botrytis cinerea	32.20	1.00e-64	239.00
IUUC-Bdi-014277	Brachypodium distachyon	75.38	0.00e+00	828.00
IUUC-Bol-016207	Brassica oleracea	69.16	0.00e+00	754.00
IUUC-Bra-017650	Brassica rapa	70.80	0.00e+00	750.00
IUUC-Cel-018271	Caenorhabditis elegans	38.21	2.00e-97	348.00
IUUC-Cja-019879	Callithrix jacchus	44.15	8.00e-113	399.00
IUUC-Cfa-020175	Canis familiaris	43.56	2.00e-113	401.00
IUUC-Cpo-022379	Cavia porcellus	44.42	1.00e-114	405.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	48.02	3.00e-132	464.00
IUUC-Csa-023500	Chlorocebus sabaeus	44.05	7.00e-114	403.00
IUUC-Cho-025065	Choloepus hoffmanni	36.05	2.00e-43	167.00
IUUC-Cin-025699	Ciona intestinalis	44.20	5.00e-101	360.00
IUUC-Csv-026128	Ciona savignyi	42.11	2.00e-111	395.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	30.80	7.00e-58	216.00
IUUC-Cne-026860	Cryptococcus neoformans	37.85	2.00e-92	332.00
IUUC-Dre-028187	Danio rerio	43.58	3.00e-110	390.00
IUUC-Dno-029453	Dasypus novemcinctus	44.23	4.00e-114	404.00
IUUC-Dor-030150	Dipodomys ordii	46.00	6.00e-44	170.00
IUUC-Dse-031220	Dothistroma septosporum	31.84	4.00e-62	231.00
IUUC-Dme-031906	Drosophila melanogaster	42.61	5.00e-108	383.00
IUUC-Ete-033035	Echinops telfairi	42.28	5.00e-52	197.00
IUUC-Eca-033478	Equus caballus	44.23	4.00e-114	403.00
IUUC-Eeu-034974	Erinaceus europaeus	45.32	1.00e-76	279.00
IUUC-Fca-036194	Felis catus	43.75	7.00e-113	399.00
IUUC-Fal-037417	Ficedula albicollis	44.23	5.00e-114	403.00
IUUC-Fox-037922	Fusarium oxysporum	31.96	1.00e-62	232.00
IUUC-Fso-038256	Fusarium solani	31.05	4.00e-64	237.00
IUUC-Gmo-038713	Gadus morhua	43.18	7.00e-112	396.00
IUUC-Ggr-039854	Gaeumannomyces graminis	31.16	8.00e-51	193.00
IUUC-Gga-041143	Gallus gallus	43.94	5.00e-114	403.00
IUUC-Gac-042129	Gasterosteus aculeatus	44.13	7.00e-114	402.00
IUUC-Gma-043635	Glycine max	75.95	0.00e+00	847.00
IUUC-Ggo-045262	Gorilla gorilla	44.05	7.00e-114	403.00
IUUC-Hsa-046036	Homo sapiens	44.05	7.00e-114	403.00
IUUC-Hvu-047442	Hordeum vulgare	74.84	2.00e-142	496.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	43.18	4.00e-112	397.00
IUUC-Lch-050105	Latimeria chalumnae	43.62	2.00e-112	398.00
IUUC-Lpe-050976	Leersia perrieri	75.38	0.00e+00	810.00
IUUC-Loc-052042	Lepisosteus oculatus	39.10	2.00e-80	291.00
IUUC-Lma-053143	Leptosphaeria maculans	33.47	1.00e-63	237.00
IUUC-Laf-053451	Loxodonta africana	42.67	2.00e-110	391.00
IUUC-Mcc-055786	Macaca mulatta	44.05	7.00e-114	403.00
IUUC-Meu-056161	Macropus eugenii	44.58	1.00e-52	199.00
IUUC-Mor-057215	Magnaporthe oryzae	31.19	4.00e-53	201.00
IUUC-Mpo-057419	Magnaporthe poae	29.87	1.00e-45	176.00
IUUC-Mtr-057756	Medicago truncatula	71.48	0.00e+00	790.00
IUUC-Mla-059085	Melampsora laricipopulina	36.40	2.00e-77	282.00
IUUC-Mga-060158	Meleagris gallopavo	44.17	5.00e-103	366.00
IUUC-Mvi-060441	Microbotryum violaceum	34.01	3.00e-67	248.00
IUUC-Mmr-061085	Microcebus murinus	44.05	7.00e-114	403.00
IUUC-Mdo-061804	Monodelphis domestica	44.05	7.00e-114	402.00
IUUC-Mmu-063608	Mus musculus	42.52	2.00e-110	392.00
IUUC-Mac-064972	Musa acuminata	76.42	0.00e+00	825.00
IUUC-Mpu-065700	Mustela putorius furo	43.56	2.00e-113	401.00
IUUC-Mlu-068223	Myotis lucifugus	43.20	1.00e-111	395.00
IUUC-Nfi-068504	Neosartorya fischeri	35.04	3.00e-69	254.00
IUUC-Ncr-068729	Neurospora crassa	32.65	7.00e-57	213.00
IUUC-Nle-069754	Nomascus leucogenys	44.05	7.00e-114	403.00
IUUC-Opr-070621	Ochotona princeps	45.99	2.00e-108	384.00
IUUC-Ont-071377	Oreochromis niloticus	43.56	3.00e-111	394.00
IUUC-Oan-073498	Ornithorhynchus anatinus	32.84	3.00e-37	147.00
IUUC-Ocu-074182	Oryctolagus cuniculus	42.36	4.00e-110	390.00
IUUC-Oba-075509	Oryza barthii	75.28	0.00e+00	833.00
IUUC-Obr-076480	Oryza brachyantha	75.95	0.00e+00	831.00
IUUC-Ogl-077052	Oryza glaberrima	75.28	0.00e+00	833.00
IUUC-Ogu-078919	Oryza glumaepatula	75.47	0.00e+00	833.00
IUUC-Oin-079357	Oryza indica	72.10	0.00e+00	776.00
IUUC-Olo-080376	Oryza longistaminata	75.25	0.00e+00	780.00
IUUC-Ome-081973	Oryza meridionalis	75.65	0.00e+00	782.00
IUUC-Oni-082849	Oryza nivara	75.28	0.00e+00	833.00
IUUC-Opu-083243	Oryza punctata	75.28	0.00e+00	833.00
IUUC-Oru-084613	Oryza rufipogon	75.09	0.00e+00	831.00
IUUC-Osa-085407	Oryza sativa	75.09	0.00e+00	829.00
IUUC-Ola-086566	Oryzias latipes	43.10	1.00e-111	395.00
IUUC-Olu-087757	Ostreococcus lucimarinus	42.94	1.00e-108	385.00
IUUC-Oga-089010	Otolemur garnettii	43.15	6.00e-109	386.00
IUUC-Oar-089638	Ovis aries	44.23	2.00e-114	404.00
IUUC-Ptr-091141	Pan troglodytes	44.05	7.00e-114	403.00
IUUC-Pan-092662	Papio anubis	44.05	7.00e-114	403.00
IUUC-Psi-093777	Pelodiscus sinensis	44.04	2.00e-89	321.00
IUUC-Pno-095115	Phaeosphaeria nodorum	33.60	1.00e-63	236.00
IUUC-Ppa-095924	Physcomitrella patens	68.87	0.00e+00	767.00
IUUC-Pfo-096390	Poecilia formosa	43.94	4.00e-112	397.00
IUUC-Pab-098250	Pongo abelii	44.91	2.00e-111	395.00
IUUC-Pop-099854	Populus trichocarpa	76.91	0.00e+00	853.00
IUUC-Pca-100553	Procavia capensis	44.05	5.00e-112	396.00
IUUC-Ppe-101383	Prunus persica	72.33	0.00e+00	789.00
IUUC-Pva-102189	Pteropus vampyrus	44.23	2.00e-114	404.00
IUUC-Pgr-103304	Puccinia graminis	34.25	3.00e-76	278.00
IUUC-Ptt-103984	Puccinia triticina	34.00	2.00e-77	282.00
IUUC-Pte-104385	Pyrenophora teres	31.71	7.00e-62	230.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	31.59	2.00e-60	225.00
IUUC-Rno-105581	Rattus norvegicus	44.05	4.00e-114	403.00
IUUC-Sce-106147	Saccharomyces cerevisiae	39.16	2.00e-24	105.00
IUUC-Sha-107071	Sarcophilus harrisii	42.29	6.00e-110	390.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	31.48	2.00e-41	162.00
IUUC-Spo-108315	Schizosaccharomyces pombe	30.12	3.00e-40	158.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	30.28	4.00e-59	221.00
IUUC-Smo-109648	Selaginella moellendorffii	66.54	0.00e+00	739.00
IUUC-Sit-109873	Setaria italica	74.30	0.00e+00	813.00
IUUC-Sly-111673	Solanum lycopersicum	74.95	0.00e+00	801.00
IUUC-Stu-112125	Solanum tuberosum	75.57	0.00e+00	796.00
IUUC-Sbi-114696	Sorghum bicolor	68.26	0.00e+00	707.00
IUUC-Sre-115134	Sporisorium reilianum	33.69	7.00e-76	276.00
IUUC-Ssc-116260	Sus scrofa	44.23	1.00e-114	405.00
IUUC-Tgu-116533	Taeniopygia guttata	43.75	2.00e-113	401.00
IUUC-Tru-117800	Takifugu rubripes	43.96	2.00e-113	401.00
IUUC-Tsy-118980	Tarsius syrichta	41.78	4.00e-99	353.00
IUUC-Tni-120334	Tetraodon nigroviridis	43.10	6.00e-75	273.00
IUUC-Tca-121807	Theobroma cacao	76.34	0.00e+00	838.00
IUUC-Tre-121920	Trichoderma reesei	31.35	2.00e-57	215.00
IUUC-Tvi-122294	Trichoderma virens	30.12	6.00e-50	190.00
IUUC-Tae-125713	Triticum aestivum	74.62	0.00e+00	821.00
IUUC-Tur-126664	Triticum urartu	66.90	0.00e+00	775.00
IUUC-Tme-127026	Tuber melanosporum	32.11	8.00e-65	239.00
IUUC-Tbe-127582	Tupaia belangeri	44.67	4.00e-76	277.00
IUUC-Ttr-128313	Tursiops truncatus	44.05	3.00e-113	400.00
IUUC-Uma-129626	Ustilago maydis	35.01	3.00e-77	281.00
IUUC-Vda-129699	Verticillium dahliae	31.15	3.00e-55	208.00
IUUC-Vpa-130593	Vicugna pacos	46.20	2.00e-108	384.00
IUUC-Vvi-131668	Vitis vinifera	78.24	0.00e+00	862.00
IUUC-Xtr-132186	Xenopus tropicalis	46.76	2.00e-102	364.00
IUUC-Xma-133212	Xiphophorus maculatus	43.61	7.00e-112	396.00
IUUC-Yli-134607	Yarrowia lipolytica	51.91	2.00e-37	146.00
IUUC-Zma-135662	Zea mays	74.81	0.00e+00	812.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence