iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aml-001709

Ensembl Protein ID

ENSAMEP00000006642.1

UniProt Accession

G1LI94; G1LI94_AILME

Genbank Protein ID

ENSAMEP00000006642

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01185267

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000006289.1	ENSAMET00000006922.1	ENSAMEP00000006642.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-16	59.7	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ vt++++ ++ +++v+++ D + +vW 
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWT 80
           9**********888***************6 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MAYHSFLVEP ISCHAWNKDR TQIAICPNNH EVHIYEKSGA KWVKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGRTWKPTL VILRINRAAR CVRWAPQENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTACC ACAGCTTCCT GGTGGAGCCC ATCAGCTGCC ACGCCTGGAA CAAGGACCGC 60
ACCCGTGAGT GCCACTGCCC ACAGGATGAC GTGAGGGGGG AGCCCCCGGA GTGCATGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	44.72	7.00e-64	237.00
IUUC-Aly-005532	Arabidopsis lyrata	41.29	6.00e-80	290.00
IUUC-Ath-006683	Arabidopsis thaliana	42.13	2.00e-80	292.00
IUUC-Ame-011512	Astyanax mexicanus	79.73	0.00e+00	647.00
IUUC-Bta-012442	Bos taurus	94.40	0.00e+00	714.00
IUUC-Bdi-014632	Brachypodium distachyon	41.78	2.00e-78	285.00
IUUC-Bol-016274	Brassica oleracea	42.13	8.00e-83	300.00
IUUC-Bra-016790	Brassica rapa	41.44	2.00e-81	295.00
IUUC-Cja-019899	Callithrix jacchus	95.49	0.00e+00	743.00
IUUC-Cfa-020067	Canis familiaris	97.07	0.00e+00	731.00
IUUC-Cpo-022461	Cavia porcellus	96.28	0.00e+00	728.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	34.69	9.00e-35	139.00
IUUC-Csa-023277	Chlorocebus sabaeus	88.03	0.00e+00	684.00
IUUC-Dre-028141	Danio rerio	79.73	0.00e+00	643.00
IUUC-Dor-030559	Dipodomys ordii	94.95	0.00e+00	730.00
IUUC-Ete-032299	Echinops telfairi	93.62	0.00e+00	735.00
IUUC-Eca-033593	Equus caballus	94.69	0.00e+00	722.00
IUUC-Fca-036254	Felis catus	96.54	0.00e+00	734.00
IUUC-Fal-037453	Ficedula albicollis	87.30	0.00e+00	689.00
IUUC-Gmo-038471	Gadus morhua	69.31	1.00e-162	565.00
IUUC-Gga-040898	Gallus gallus	86.97	0.00e+00	692.00
IUUC-Gac-042236	Gasterosteus aculeatus	74.29	2.00e-176	611.00
IUUC-Gma-043227	Glycine max	40.43	9.00e-80	290.00
IUUC-Ggo-045355	Gorilla gorilla	80.37	3.00e-167	581.00
IUUC-Hsa-046623	Homo sapiens	96.54	0.00e+00	731.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	95.74	0.00e+00	735.00
IUUC-Lch-049679	Latimeria chalumnae	78.13	0.00e+00	633.00
IUUC-Lpe-050869	Leersia perrieri	41.44	2.00e-78	286.00
IUUC-Loc-052140	Lepisosteus oculatus	77.87	0.00e+00	628.00
IUUC-Laf-054287	Loxodonta africana	93.88	0.00e+00	707.00
IUUC-Meu-056302	Macropus eugenii	89.89	0.00e+00	709.00
IUUC-Mtr-057659	Medicago truncatula	40.69	8.00e-83	300.00
IUUC-Mga-059279	Meleagris gallopavo	86.97	0.00e+00	693.00
IUUC-Mmr-060752	Microcebus murinus	96.16	0.00e+00	721.00
IUUC-Mdo-062836	Monodelphis domestica	85.90	0.00e+00	670.00
IUUC-Mmu-064099	Mus musculus	96.28	0.00e+00	734.00
IUUC-Mac-064632	Musa acuminata	42.97	2.00e-81	295.00
IUUC-Mpu-066247	Mustela putorius furo	98.40	0.00e+00	724.00
IUUC-Mlu-067571	Myotis lucifugus	95.74	0.00e+00	743.00
IUUC-Nle-069492	Nomascus leucogenys	82.76	3.00e-170	590.00
IUUC-Ont-071316	Oreochromis niloticus	73.25	5.00e-175	606.00
IUUC-Oan-072692	Ornithorhynchus anatinus	87.77	0.00e+00	696.00
IUUC-Ocu-074187	Oryctolagus cuniculus	91.76	0.00e+00	707.00
IUUC-Oba-075379	Oryza barthii	41.58	4.00e-79	288.00
IUUC-Obr-076404	Oryza brachyantha	41.96	7.00e-80	290.00
IUUC-Ogl-077409	Oryza glaberrima	39.19	5.00e-73	267.00
IUUC-Ogu-078759	Oryza glumaepatula	41.58	5.00e-79	288.00
IUUC-Oin-079118	Oryza indica	41.62	8.00e-80	290.00
IUUC-Olo-081055	Oryza longistaminata	40.96	1.00e-69	256.00
IUUC-Ome-081281	Oryza meridionalis	41.58	6.00e-79	287.00
IUUC-Oni-083043	Oryza nivara	41.58	4.00e-79	288.00
IUUC-Oru-084839	Oryza rufipogon	41.58	4.00e-79	288.00
IUUC-Osa-085377	Oryza sativa	41.62	1.00e-79	290.00
IUUC-Oga-088610	Otolemur garnettii	96.54	0.00e+00	731.00
IUUC-Oar-089639	Ovis aries	93.33	0.00e+00	700.00
IUUC-Ptr-091023	Pan troglodytes	96.28	0.00e+00	729.00
IUUC-Pan-091727	Papio anubis	96.01	0.00e+00	737.00
IUUC-Pfo-097058	Poecilia formosa	73.51	3.00e-175	607.00
IUUC-Pab-098238	Pongo abelii	96.28	0.00e+00	734.00
IUUC-Pca-100580	Procavia capensis	93.88	0.00e+00	708.00
IUUC-Ppe-101681	Prunus persica	41.89	2.00e-81	296.00
IUUC-Pva-102928	Pteropus vampyrus	93.62	0.00e+00	690.00
IUUC-Rno-104846	Rattus norvegicus	94.95	0.00e+00	722.00
IUUC-Sly-111048	Solanum lycopersicum	41.44	7.00e-78	283.00
IUUC-Sar-113404	Sorex araneus	77.68	2.00e-156	545.00
IUUC-Sbi-114685	Sorghum bicolor	41.62	2.00e-78	285.00
IUUC-Tru-118106	Takifugu rubripes	74.48	2.00e-178	617.00
IUUC-Tni-120079	Tetraodon nigroviridis	75.26	6.00e-179	619.00
IUUC-Tca-121645	Theobroma cacao	43.01	2.00e-80	292.00
IUUC-Tae-125810	Triticum aestivum	38.29	4.00e-73	268.00
IUUC-Tur-126640	Triticum urartu	39.73	3.00e-69	255.00
IUUC-Ttr-128698	Tursiops truncatus	96.28	0.00e+00	733.00
IUUC-Vvi-131647	Vitis vinifera	41.82	2.00e-81	295.00
IUUC-Xtr-131893	Xenopus tropicalis	82.18	0.00e+00	657.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence