iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076393

Ensembl Protein ID

OB09G14880.1

UniProt Accession

J3MWV9; J3MWV9_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB09G14880	OB09G14880.1	OB09G14880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-17	62.2	201	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllk 37
           gHtd  +++a    + + +++Gs Dgt ++WD r+g++++
   Q: 201  GHTDYLHSIAVreaN-RQVATGSEDGTARIWDCRSGKCTQ 239
           8**********8844.89********************97 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDARGWDEAA YRRGILRERG LSCRTLFRAV FFDHQDDPDK PDVLLAAASS DGSLASFSLS 60
SCISSSSSAA AAPQAPDAVS MVDPVCIVQA HSGPAYDVKF YPDSQQPLLF SGGDDGRLRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCGC GCGGGTGGGA CGAGGCGGCG TACAGGCGCG GCATCCTGCG GGAGCGGGGC 60
CTCTCCTGCC GCACCCTCTT CCGCGCCGTC TTCTTCGACC ACCAGGACGA CCCGGACAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0000347--C:THO complex
GO:0009788--P:negative regulation of abscisic acid-activated signaling pathway
GO:0010267--P:production of ta-siRNAs involved in RNA interference
GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	84.18	3.00e-168	583.00
IUUC-Aml-001693	Ailuropoda melanoleuca	29.96	9.00e-29	119.00
IUUC-Atr-002699	Amborella trichopoda	53.52	2.00e-97	348.00
IUUC-Aca-004231	Anolis carolinensis	30.69	4.00e-33	134.00
IUUC-Aly-006385	Arabidopsis lyrata	53.24	2.00e-101	361.00
IUUC-Ath-006723	Arabidopsis thaliana	53.78	2.00e-101	361.00
IUUC-Ame-010813	Astyanax mexicanus	27.88	6.00e-21	93.20
IUUC-Bta-013458	Bos taurus	29.15	7.00e-28	116.00
IUUC-Bdi-014935	Brachypodium distachyon	86.86	2.00e-172	597.00
IUUC-Bol-015442	Brassica oleracea	53.91	2.00e-100	358.00
IUUC-Bra-017807	Brassica rapa	54.10	3.00e-107	380.00
IUUC-Cja-019061	Callithrix jacchus	31.17	3.00e-29	121.00
IUUC-Cfa-021146	Canis familiaris	29.96	5.00e-29	120.00
IUUC-Cpo-022512	Cavia porcellus	29.96	8.00e-29	120.00
IUUC-Cre-022937	Chlamydomonas reinhardtii	25.94	7.00e-06	43.90
IUUC-Csa-023055	Chlorocebus sabaeus	30.65	3.00e-30	124.00
IUUC-Cho-024693	Choloepus hoffmanni	32.91	6.00e-19	85.90
IUUC-Cin-025181	Ciona intestinalis	30.80	3.00e-33	134.00
IUUC-Csv-025852	Ciona savignyi	30.15	8.00e-32	129.00
IUUC-Dre-028221	Danio rerio	27.57	1.00e-28	119.00
IUUC-Dno-029200	Dasypus novemcinctus	31.33	3.00e-16	77.00
IUUC-Dor-030863	Dipodomys ordii	29.13	4.00e-29	120.00
IUUC-Dme-032016	Drosophila melanogaster	28.02	6.00e-22	97.40
IUUC-Eca-034363	Equus caballus	29.96	6.00e-29	120.00
IUUC-Fca-036546	Felis catus	30.36	5.00e-29	120.00
IUUC-Gmo-038513	Gadus morhua	31.34	1.00e-24	106.00
IUUC-Gac-042606	Gasterosteus aculeatus	29.51	1.00e-29	122.00
IUUC-Gma-042881	Glycine max	56.33	3.00e-117	414.00
IUUC-Ggo-044877	Gorilla gorilla	30.36	1.00e-29	122.00
IUUC-Hsa-045813	Homo sapiens	30.36	1.00e-29	122.00
IUUC-Hvu-047782	Hordeum vulgare	84.15	8.00e-91	324.00
IUUC-Itr-047876	Ictidomys tridecemlineatus	28.92	2.00e-28	118.00
IUUC-Lch-049506	Latimeria chalumnae	30.93	2.00e-34	138.00
IUUC-Lpe-051203	Leersia perrieri	84.84	1.00e-169	587.00
IUUC-Loc-052451	Lepisosteus oculatus	33.33	4.00e-30	124.00
IUUC-Laf-053864	Loxodonta africana	31.17	7.00e-30	123.00
IUUC-Mcc-055705	Macaca mulatta	29.44	6.00e-27	114.00
IUUC-Meu-055926	Macropus eugenii	31.17	1.00e-28	119.00
IUUC-Mtr-058556	Medicago truncatula	55.88	4.00e-118	416.00
IUUC-Mmr-060836	Microcebus murinus	30.36	5.00e-29	120.00
IUUC-Mdo-062534	Monodelphis domestica	30.29	2.00e-26	112.00
IUUC-Mmu-063560	Mus musculus	29.96	1.00e-28	119.00
IUUC-Mac-065134	Musa acuminata	60.75	1.00e-128	452.00
IUUC-Mpu-066031	Mustela putorius furo	29.96	7.00e-29	120.00
IUUC-Mlu-068051	Myotis lucifugus	30.65	9.00e-30	123.00
IUUC-Nle-069080	Nomascus leucogenys	30.36	2.00e-29	122.00
IUUC-Opr-070787	Ochotona princeps	29.96	6.00e-28	117.00
IUUC-Ont-071952	Oreochromis niloticus	30.94	1.00e-29	123.00
IUUC-Oan-073334	Ornithorhynchus anatinus	31.19	4.00e-21	94.40
IUUC-Oba-075175	Oryza barthii	88.80	1.00e-178	617.00
IUUC-Ogl-077603	Oryza glaberrima	84.67	3.00e-116	410.00
IUUC-Ogu-078211	Oryza glumaepatula	88.53	2.00e-173	600.00
IUUC-Oin-079554	Oryza indica	96.32	3.00e-163	566.00
IUUC-Olo-080922	Oryza longistaminata	74.85	2.00e-124	437.00
IUUC-Ome-081127	Oryza meridionalis	80.00	2.00e-147	514.00
IUUC-Oni-082376	Oryza nivara	88.80	1.00e-173	601.00
IUUC-Opu-083163	Oryza punctata	88.53	1.00e-177	614.00
IUUC-Oru-084311	Oryza rufipogon	88.80	2.00e-173	600.00
IUUC-Osa-085762	Oryza sativa	84.67	3.00e-111	393.00
IUUC-Oga-088804	Otolemur garnettii	30.36	5.00e-29	120.00
IUUC-Oar-090095	Ovis aries	28.34	4.00e-27	114.00
IUUC-Ptr-090731	Pan troglodytes	30.36	1.00e-29	122.00
IUUC-Pan-092595	Papio anubis	30.68	4.00e-30	124.00
IUUC-Psi-093866	Pelodiscus sinensis	29.70	6.00e-32	130.00
IUUC-Pma-094236	Petromyzon marinus	28.81	6.00e-30	123.00
IUUC-Pfo-096095	Poecilia formosa	30.31	5.00e-31	127.00
IUUC-Pab-098385	Pongo abelii	30.36	1.00e-29	122.00
IUUC-Pop-099433	Populus trichocarpa	55.80	1.00e-116	411.00
IUUC-Pca-101119	Procavia capensis	32.35	2.00e-25	108.00
IUUC-Ppe-101677	Prunus persica	58.65	4.00e-127	446.00
IUUC-Pva-102726	Pteropus vampyrus	31.58	2.00e-31	128.00
IUUC-Rno-105576	Rattus norvegicus	29.55	5.00e-28	117.00
IUUC-Sha-106774	Sarcophilus harrisii	30.77	8.00e-28	116.00
IUUC-Sit-109988	Setaria italica	87.40	4.00e-180	622.00
IUUC-Sly-110864	Solanum lycopersicum	53.11	7.00e-87	313.00
IUUC-Sar-113060	Sorex araneus	28.23	2.00e-25	108.00
IUUC-Sbi-114699	Sorghum bicolor	79.89	3.00e-174	603.00
IUUC-Ssc-116445	Sus scrofa	29.15	1.00e-28	119.00
IUUC-Tru-117834	Takifugu rubripes	29.73	2.00e-29	122.00
IUUC-Tni-119651	Tetraodon nigroviridis	29.73	3.00e-29	121.00
IUUC-Tca-121318	Theobroma cacao	55.86	3.00e-118	417.00
IUUC-Tae-124184	Triticum aestivum	84.18	2.00e-168	584.00
IUUC-Tur-126226	Triticum urartu	78.02	8.00e-125	438.00
IUUC-Tbe-128079	Tupaia belangeri	27.86	4.00e-12	63.90
IUUC-Ttr-128391	Tursiops truncatus	27.02	6.00e-23	100.00
IUUC-Vvi-131148	Vitis vinifera	62.10	2.00e-116	410.00
IUUC-Xtr-132743	Xenopus tropicalis	30.18	2.00e-33	135.00
IUUC-Xma-133722	Xiphophorus maculatus	30.64	5.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence