iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-018804

Ensembl Protein ID

ENSCJAP00000018069.1

UniProt Accession

F7GA04; F7GA04_CALJA

Genbank Protein ID

JAB06145.1; JAB20592.1; JAB30004.1; JAB39334.1; JAB43291.1

Protein Name

WD repeat-containing protein 48

Genbank Nucleotide ID

ACFV01126084; GAMS01002544; GAMR01003928; GAMQ01002517; GAMP01009464

Gene Name

WDR48

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000009759.2	ENSCJAT00000019066.1	ENSCJAP00000018038.1
ENSCJAG00000009759.2	ENSCJAT00000058989.1	ENSCJAP00000048218.1
ENSCJAG00000009759.2	ENSCJAT00000019095.1	ENSCJAP00000018066.1
ENSCJAG00000009759.2	ENSCJAT00000019098.1	ENSCJAP00000018069.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-32	110.3	208	245
UBD/Beta-Prp	4.00e-47	161.8	44	294
ULD/UBL/SUMO	4.90e-63	210.8	559	666
ULD/UDP/UFD/RAWUL	2.10e-23	83.6	568	673

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHtd v +l +  d t  +sGs Dgti++W+l +++++
   Q: 208  GHTDNVKALLLnRDgTQCLSGSSDGTIRLWSLGQQRCI 245
           8********88*888*****************999997 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdkl 109
            l+t++rd+ i++w+v + k    ++s++ h++ v+++ +  +gk+l+++s+D t+kvw+  +g c++tl+ h+d+v +l++ ++++ +
   Q: 44   RLFTAGRDSIIRIWSVNQHKQdpyIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
           589***************999999***************************************************************** PP
   S: 110  vsGshdrtirvwdletgqclee........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfds 190
           +s++ dr i +wd++t + l +         lsg+++++ +++++  g ++vsGs+ +++r+Wd +t   l +l+g htd v+ l +++
   Q: 133  ASAGLDRQIFLWDVNTLTALTAsnntvttsSLSGNKDSIYSLAMNHLGTVIVSGSTEKVLRVWDPRTCAKLMKLKG-HTDNVKALLLNR 220
           ********************99****************************************************99.************ PP
   S: 191  ngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           +g++++sgs dgt++lw+l +++c+ t++ h++ v+ +++ +  ++++sg+ D+ i++ dlr+ d+   +  ++
   Q: 221  DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEK 294
           *************************************************************9988877666666 PP

ULD/UBL/SUMO

   S: 1    eskffkapvslkvagqdGsevlfklklsa....qlkklmeavYvkrinldensvrfv.fngqkireqetpeelevededkiellcq... 81
           ++kf+k+p++l++++++G+++l+k++lsa    q++k+me+vY+k+inld++s++++ +n++k++eqe++e+++v++e+kiellcq   
   Q: 559  MPKFNKIPFYLQPHASSGAKTLKKDRLSAsdmlQVRKVMEHVYEKIINLDNESQTTSsSNNEKPGEQEKEEDIAVLAEEKIELLCQdqv 647
           8********************************************************9****************************777 PP
   S: 82   ...............ksGG 85
                          ksGG
   Q: 648  ldpnmdlrtvkhfiwKSGG 666
           7777777777777777776 PP

ULD/UDP/UFD/RAWUL

   S: 4    sLeplesnkakddsklkkkylrcsarltVkhlkkflaeklkl........sssy.....................evdllcedevLedn 63
            L+p++s++ak+   lkk++l++s++l+V++++++++ek+++        s                        +++llc+d+vL++n
   Q: 568  YLQPHASSGAKT---LKKDRLSASDMLQVRKVMEHVYEKIINldnesqttS--SsnnekpgeqekeediavlaeeKIELLCQDQVLDPN 651
           69**********...*************************99988766653..045799999999************************ PP
   S: 64   etLeeikyifiwkkegpLvLqYr 86
           ++L+++ ++fiwk++g+L+L+Yr
   Q: 652  MDLRTV-KHFIWKSGGDLTLHYR 673
           ******.***************9 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MAAHHRQNTA GRRKVQVSYV IRDEVEKYNR NGVNALQLDP ALNRLFTAGR DSIIRIWSVN 60
QHKQDPYIAS MEHHTDWVND IVLCCNGKTL ISASSDTTVK VWNAHKGFCM STLRTHKDYV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACATGCAA GATGGCGGCC CATCACCGGC AGAACACGGC AGGGCGGAGG AAAGTGCAGG 60
TATGGAAGCC TGGTTCCTCG GCCTTCCGGA CGCGGCAGGC AGCTCCGGGC CCACTCCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021772--DUF3337
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11816--DUF3337
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0000724--P:double-strand break repair via homologous recombination
GO:0048568--P:embryonic organ development
GO:0048872--P:homeostasis of number of cells
GO:0035264--P:multicellular organism growth
GO:0050679--P:positive regulation of epithelial cell proliferation
GO:0016579--P:protein deubiquitination
GO:1902525--P:regulation of protein monoubiquitination
GO:0072520--P:seminiferous tubule development
GO:0007338--P:single fertilization
GO:0048705--P:skeletal system morphogenesis
GO:0043588--P:skin development
GO:0007283--P:spermatogenesis

KEGG

cjc:100415313

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001160	Aegilops tauschii	40.12	7.00e-97	348.00
IUUC-Aml-001533	Ailuropoda melanoleuca	99.41	0.00e+00	1270.00
IUUC-Atr-003009	Amborella trichopoda	33.64	1.00e-109	390.00
IUUC-Apl-003709	Anas platyrhynchos	97.96	0.00e+00	660.00
IUUC-Aca-004875	Anolis carolinensis	97.93	0.00e+00	1294.00
IUUC-Aly-005464	Arabidopsis lyrata	39.45	3.00e-93	336.00
IUUC-Ath-006969	Arabidopsis thaliana	38.86	2.00e-89	323.00
IUUC-Acl-008203	Aspergillus clavatus	34.33	2.00e-47	184.00
IUUC-Afl-008571	Aspergillus flavus	35.63	3.00e-46	180.00
IUUC-Afu-009072	Aspergillus fumigatus	35.03	8.00e-45	176.00
IUUC-Ani-009413	Aspergillus nidulans	36.39	3.00e-48	187.00
IUUC-Ang-009571	Aspergillus niger	35.33	8.00e-45	176.00
IUUC-Aor-010064	Aspergillus oryzae	35.63	2.00e-46	181.00
IUUC-Ate-010463	Aspergillus terreus	35.03	5.00e-46	179.00
IUUC-Ame-010875	Astyanax mexicanus	94.40	0.00e+00	1091.00
IUUC-Bgr-012288	Blumeria graminis	34.02	1.00e-41	165.00
IUUC-Bta-013379	Bos taurus	99.41	0.00e+00	1272.00
IUUC-Bci-013859	Botrytis cinerea	32.10	4.00e-41	163.00
IUUC-Bdi-014645	Brachypodium distachyon	34.85	6.00e-112	398.00
IUUC-Bol-015551	Brassica oleracea	34.57	3.00e-105	375.00
IUUC-Bra-017237	Brassica rapa	33.83	1.00e-101	363.00
IUUC-Cel-018656	Caenorhabditis elegans	44.46	3.00e-155	542.00
IUUC-Cfa-020076	Canis familiaris	99.56	0.00e+00	1274.00
IUUC-Cpo-021721	Cavia porcellus	97.89	0.00e+00	1217.00
IUUC-Cre-022779	Chlamydomonas reinhardtii	30.45	9.00e-41	162.00
IUUC-Csa-023188	Chlorocebus sabaeus	99.56	0.00e+00	1274.00
IUUC-Cho-024932	Choloepus hoffmanni	98.38	0.00e+00	1278.00
IUUC-Cin-025591	Ciona intestinalis	56.85	0.00e+00	726.00
IUUC-Cgl-026540	Colletotrichum gloeosporioides	27.24	4.00e-21	97.10
IUUC-Cne-026819	Cryptococcus neoformans	35.53	4.00e-34	140.00
IUUC-Cme-027188	Cyanidioschyzon merolae	32.12	4.00e-72	265.00
IUUC-Dre-027926	Danio rerio	92.47	0.00e+00	1266.00
IUUC-Dno-029960	Dasypus novemcinctus	98.67	0.00e+00	1263.00
IUUC-Dor-030933	Dipodomys ordii	94.26	0.00e+00	706.00
IUUC-Dse-031532	Dothistroma septosporum	35.07	1.00e-45	178.00
IUUC-Dme-032168	Drosophila melanogaster	56.83	0.00e+00	686.00
IUUC-Ete-033107	Echinops telfairi	95.27	0.00e+00	1201.00
IUUC-Eca-034028	Equus caballus	99.41	0.00e+00	1273.00
IUUC-Eeu-034894	Erinaceus europaeus	96.16	0.00e+00	843.00
IUUC-Fca-035619	Felis catus	99.39	0.00e+00	949.00
IUUC-Fal-036869	Ficedula albicollis	98.04	0.00e+00	1264.00
IUUC-Fox-037907	Fusarium oxysporum	32.49	6.00e-41	162.00
IUUC-Fso-038101	Fusarium solani	32.77	2.00e-40	161.00
IUUC-Gmo-038627	Gadus morhua	94.83	0.00e+00	1289.00
IUUC-Ggr-039995	Gaeumannomyces graminis	31.01	1.00e-42	169.00
IUUC-Gga-040555	Gallus gallus	98.23	0.00e+00	1294.00
IUUC-Gac-042497	Gasterosteus aculeatus	94.53	0.00e+00	1263.00
IUUC-Gma-043089	Glycine max	33.94	1.00e-109	390.00
IUUC-Ggo-045561	Gorilla gorilla	99.56	0.00e+00	1274.00
IUUC-Hsa-045710	Homo sapiens	99.56	0.00e+00	1274.00
IUUC-Hvu-047730	Hordeum vulgare	35.53	4.00e-84	305.00
IUUC-Itr-049030	Ictidomys tridecemlineatus	99.79	0.00e+00	902.00
IUUC-Kpa-049237	Komagataella pastoris	31.50	1.00e-30	128.00
IUUC-Lch-049507	Latimeria chalumnae	96.90	0.00e+00	1263.00
IUUC-Lpe-051608	Leersia perrieri	35.11	9.00e-110	391.00
IUUC-Loc-052373	Lepisosteus oculatus	93.52	0.00e+00	1249.00
IUUC-Lma-053025	Leptosphaeria maculans	36.14	3.00e-48	187.00
IUUC-Laf-053706	Loxodonta africana	98.79	0.00e+00	1236.00
IUUC-Mcc-055046	Macaca mulatta	99.56	0.00e+00	1274.00
IUUC-Meu-056840	Macropus eugenii	80.12	6.00e-149	521.00
IUUC-Mor-057284	Magnaporthe oryzae	33.23	7.00e-44	172.00
IUUC-Mpo-057418	Magnaporthe poae	30.73	2.00e-41	165.00
IUUC-Mtr-058571	Medicago truncatula	34.47	1.00e-108	387.00
IUUC-Mla-059101	Melampsora laricipopulina	44.61	4.00e-45	177.00
IUUC-Mga-059297	Meleagris gallopavo	98.23	0.00e+00	1294.00
IUUC-Mvi-060419	Microbotryum violaceum	38.15	4.00e-38	154.00
IUUC-Mmr-061196	Microcebus murinus	92.63	0.00e+00	1145.00
IUUC-Mdo-062762	Monodelphis domestica	94.32	0.00e+00	1279.00
IUUC-Mmu-063915	Mus musculus	98.38	0.00e+00	1291.00
IUUC-Mac-065434	Musa acuminata	34.63	2.00e-105	376.00
IUUC-Mpu-065999	Mustela putorius furo	98.83	0.00e+00	841.00
IUUC-Mlu-068226	Myotis lucifugus	99.11	0.00e+00	1266.00
IUUC-Nfi-068416	Neosartorya fischeri	29.75	5.00e-55	209.00
IUUC-Ncr-068825	Neurospora crassa	31.34	3.00e-40	160.00
IUUC-Nle-069416	Nomascus leucogenys	99.56	0.00e+00	1274.00
IUUC-Opr-070515	Ochotona princeps	94.83	0.00e+00	1196.00
IUUC-Ont-072052	Oreochromis niloticus	92.22	0.00e+00	1201.00
IUUC-Oan-073636	Ornithorhynchus anatinus	94.41	0.00e+00	1251.00
IUUC-Ocu-074799	Oryctolagus cuniculus	99.41	0.00e+00	1271.00
IUUC-Oba-075146	Oryza barthii	35.24	1.00e-110	393.00
IUUC-Obr-076699	Oryza brachyantha	34.95	5.00e-111	395.00
IUUC-Ogl-077883	Oryza glaberrima	33.47	6.00e-67	248.00
IUUC-Ogu-078114	Oryza glumaepatula	35.38	5.00e-110	392.00
IUUC-Oin-079575	Oryza indica	35.26	2.00e-113	403.00
IUUC-Olo-080531	Oryza longistaminata	32.82	1.00e-99	357.00
IUUC-Ome-081368	Oryza meridionalis	40.67	4.00e-98	352.00
IUUC-Oni-082457	Oryza nivara	35.24	2.00e-110	393.00
IUUC-Opu-084050	Oryza punctata	35.11	1.00e-109	390.00
IUUC-Oru-084330	Oryza rufipogon	35.24	2.00e-110	393.00
IUUC-Osa-085408	Oryza sativa	35.26	2.00e-113	403.00
IUUC-Ola-087546	Oryzias latipes	94.15	0.00e+00	1264.00
IUUC-Olu-087710	Ostreococcus lucimarinus	31.05	3.00e-79	289.00
IUUC-Oga-087998	Otolemur garnettii	98.07	0.00e+00	1245.00
IUUC-Oar-090303	Ovis aries	99.41	0.00e+00	1272.00
IUUC-Ptr-090588	Pan troglodytes	99.56	0.00e+00	1274.00
IUUC-Pan-092722	Papio anubis	99.56	0.00e+00	1274.00
IUUC-Psi-093911	Pelodiscus sinensis	97.65	0.00e+00	1294.00
IUUC-Pma-094580	Petromyzon marinus	87.89	0.00e+00	1184.00
IUUC-Pno-095085	Phaeosphaeria nodorum	34.71	4.00e-43	170.00
IUUC-Ppa-095594	Physcomitrella patens	35.62	2.00e-113	403.00
IUUC-Pfo-096994	Poecilia formosa	94.28	0.00e+00	1259.00
IUUC-Pab-097586	Pongo abelii	99.41	0.00e+00	1271.00
IUUC-Pop-099740	Populus trichocarpa	34.51	2.00e-103	370.00
IUUC-Pca-100458	Procavia capensis	97.60	1.00e-105	377.00
IUUC-Ppe-102060	Prunus persica	34.11	1.00e-108	387.00
IUUC-Pva-102698	Pteropus vampyrus	94.68	0.00e+00	1255.00
IUUC-Pgr-103649	Puccinia graminis	34.42	9.00e-48	186.00
IUUC-Ptt-103910	Puccinia triticina	43.90	4.00e-53	203.00
IUUC-Pte-104181	Pyrenophora teres	36.14	4.00e-48	187.00
IUUC-Pyt-104439	Pyrenophora triticirepentis	35.84	1.00e-47	185.00
IUUC-Rno-104978	Rattus norvegicus	98.49	0.00e+00	1261.00
IUUC-Sha-107079	Sarcophilus harrisii	96.41	0.00e+00	1199.00
IUUC-Sja-107716	Schizosaccharomyces japonicus	30.36	2.00e-58	220.00
IUUC-Spo-108325	Schizosaccharomyces pombe	30.66	5.00e-52	199.00
IUUC-Ssl-108542	Sclerotinia sclerotiorum	32.40	2.00e-38	154.00
IUUC-Smo-109427	Selaginella moellendorffii	34.82	2.00e-110	393.00
IUUC-Sit-110755	Setaria italica	36.64	6.00e-115	408.00
IUUC-Sly-111099	Solanum lycopersicum	34.96	6.00e-97	348.00
IUUC-Sar-113408	Sorex araneus	98.98	0.00e+00	765.00
IUUC-Sbi-113789	Sorghum bicolor	35.32	2.00e-111	396.00
IUUC-Sre-114998	Sporisorium reilianum	40.26	6.00e-52	200.00
IUUC-Ssc-115434	Sus scrofa	99.56	0.00e+00	1274.00
IUUC-Tgu-116517	Taeniopygia guttata	98.23	0.00e+00	1298.00
IUUC-Tru-118174	Takifugu rubripes	94.71	0.00e+00	1265.00
IUUC-Tsy-118935	Tarsius syrichta	99.26	0.00e+00	1299.00
IUUC-Tni-119744	Tetraodon nigroviridis	95.13	0.00e+00	1234.00
IUUC-Tca-121360	Theobroma cacao	34.02	9.00e-112	397.00
IUUC-Tre-122198	Trichoderma reesei	32.29	7.00e-43	169.00
IUUC-Tvi-122389	Trichoderma virens	32.57	7.00e-43	169.00
IUUC-Tae-125576	Triticum aestivum	35.42	1.00e-112	400.00
IUUC-Tur-126699	Triticum urartu	35.19	3.00e-110	392.00
IUUC-Tme-126932	Tuber melanosporum	30.89	4.00e-54	206.00
IUUC-Tbe-127267	Tupaia belangeri	85.21	0.00e+00	735.00
IUUC-Ttr-129153	Tursiops truncatus	98.97	0.00e+00	1303.00
IUUC-Uma-129604	Ustilago maydis	41.64	6.00e-50	193.00
IUUC-Vda-129925	Verticillium dahliae	34.49	1.00e-45	178.00
IUUC-Vpa-130553	Vicugna pacos	98.48	0.00e+00	976.00
IUUC-Vvi-130995	Vitis vinifera	33.89	5.00e-107	382.00
IUUC-Xtr-132346	Xenopus tropicalis	94.10	0.00e+00	1233.00
IUUC-Xma-134266	Xiphophorus maculatus	92.91	0.00e+00	674.00
IUUC-Yli-134451	Yarrowia lipolytica	32.79	5.00e-35	142.00
IUUC-Zma-135647	Zea mays	35.57	6.00e-113	401.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence