iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100002

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s08320	POPTR_0008s08320.1	POPTR_0008s08320.1
POPTR_0008s08320	POPTR_0008s08320.2	POPTR_0008s08320.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.30e-06	29.4	10	45

Domain Profile

UBD/Alpha-Helix/UBA

   S: 5    dkleqlve.MGFdreealqaLraannnleaAveyLl 39
           +k++q+++ +G +++ a+qaL a++++le A + ++
   Q: 10   EKVQQFMSiTGTSEKVAVQALKASDWHLEGAFDAFY 45
           89***************************9988665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MHKLNRGNRE KVQQFMSITG TSEKVAVQAL KASDWHLEGA FDAFYSQPQS RTYTDSRHLE 60
ELYNRYKDPY VDMVLVDGIT ILCNDLQVDP QDIVMVCVHL SVPMLCF 107

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Nucleotide Sequence
(Fasta)

AAAAAGCTAA CTGAAAACAA GAGAGAGCTA TCGAAGTCGA AACCCTAAGA TTCTCTCTCA 60
TCACAAATAT CACTTCTCAC TGTGAATCAG GTTTCATCAA AGCTAGGAAG ATGGTCAGTT 120

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Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002572	Amborella trichopoda	79.55	3.00e-41	159.00
IUUC-Dre-028410	Danio rerio	41.35	1.00e-17	82.80
IUUC-Itr-048201	Ictidomys tridecemlineatus	39.42	5.00e-17	80.10
IUUC-Meu-056626	Macropus eugenii	39.42	1.00e-16	79.70
IUUC-Mga-059379	Meleagris gallopavo	39.42	6.00e-17	80.50
IUUC-Mac-064438	Musa acuminata	81.16	2.00e-30	123.00
IUUC-Opr-070265	Ochotona princeps	34.62	6.00e-12	63.90
IUUC-Sar-113509	Sorex araneus	39.42	9.00e-17	79.70
IUUC-Ttr-129086	Tursiops truncatus	39.42	1.00e-16	79.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence