iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049407

Ensembl Protein ID

CAY67823

UniProt Accession

C4QX50; C4QX50_KOMPG

Genbank Protein ID

CAY67823.1

Protein Name

Protein involved in an early, nucleolar step of 60S ribosomal subunit biogenesis

Genbank Nucleotide ID

FN392319

Gene Name

PAS_chr1-1_0446

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-1_0446	CAY67823	CAY67823

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-27	90.3	96	136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.........sd.tllvsGsdDgtikvWDlr 31
           +Ht+s+tcl+f          d + l+sGs Dg+i vW+++
   Q: 96   QHTGSITCLKFsresskardADgKWLLSGSEDGSIIVWRTK 136
           5*****************8855699*************975 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MGETLNINKS NKSTSVRFRI VVGSYEHILS CLSVTVSCEP SSEKTPIFQP IFHFEAHSLS 60
IRALDQAKRY LVSGSNDEHI KIYDLQKRKE IGSLLQHTGS ITCLKFSRES SKARDADGKW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGAGA CGTTAAATAT AAATAAGAGT AATAAGAGCA CCTCTGTTCG GTTTCGAATC 60
GTAGTTGGAT CTTATGAGCA CATACTATCA TGTCTTAGTG TTACTGTCAG TTGCGAACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016020--C:membrane
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000027--P:ribosomal large subunit assembly

KEGG

ppa:PAS_chr1-1_0446

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001803	Ailuropoda melanoleuca	32.54	3.00e-41	160.00
IUUC-Atr-003018	Amborella trichopoda	27.45	2.00e-27	114.00
IUUC-Apl-004199	Anas platyrhynchos	35.29	6.00e-46	175.00
IUUC-Aca-005157	Anolis carolinensis	34.85	9.00e-42	161.00
IUUC-Aly-006245	Arabidopsis lyrata	29.22	6.00e-27	112.00
IUUC-Ath-007309	Arabidopsis thaliana	29.22	1.00e-26	111.00
IUUC-Ago-007878	Ashbya gossypii	48.71	7.00e-80	288.00
IUUC-Acl-008015	Aspergillus clavatus	26.85	3.00e-24	103.00
IUUC-Afl-008460	Aspergillus flavus	27.07	5.00e-19	86.70
IUUC-Afu-008760	Aspergillus fumigatus	26.83	1.00e-26	112.00
IUUC-Ani-009358	Aspergillus nidulans	26.50	4.00e-22	97.10
IUUC-Aor-010146	Aspergillus oryzae	27.07	5.00e-19	86.70
IUUC-Ate-010411	Aspergillus terreus	26.60	2.00e-19	88.20
IUUC-Ame-011121	Astyanax mexicanus	29.33	2.00e-39	154.00
IUUC-Bgr-012152	Blumeria graminis	27.13	7.00e-23	99.40
IUUC-Bta-012383	Bos taurus	34.08	4.00e-43	166.00
IUUC-Bci-013752	Botrytis cinerea	27.41	3.00e-26	110.00
IUUC-Bol-015458	Brassica oleracea	28.90	4.00e-26	109.00
IUUC-Bra-017790	Brassica rapa	28.90	7.00e-26	108.00
IUUC-Cja-018803	Callithrix jacchus	33.94	3.00e-37	146.00
IUUC-Cfa-020178	Canis familiaris	32.94	8.00e-43	165.00
IUUC-Cpo-021785	Cavia porcellus	34.86	7.00e-44	169.00
IUUC-Cre-022703	Chlamydomonas reinhardtii	31.22	4.00e-28	117.00
IUUC-Csa-023179	Chlorocebus sabaeus	32.35	2.00e-41	160.00
IUUC-Cho-025088	Choloepus hoffmanni	34.67	2.00e-28	117.00
IUUC-Csv-025887	Ciona savignyi	30.14	1.00e-36	144.00
IUUC-Cgl-026525	Colletotrichum gloeosporioides	27.69	4.00e-27	114.00
IUUC-Cne-027021	Cryptococcus neoformans	37.07	1.00e-33	137.00
IUUC-Dre-027360	Danio rerio	33.22	3.00e-41	159.00
IUUC-Dno-029836	Dasypus novemcinctus	35.53	1.00e-43	167.00
IUUC-Dor-030677	Dipodomys ordii	34.43	2.00e-41	160.00
IUUC-Dse-031177	Dothistroma septosporum	25.18	3.00e-19	87.80
IUUC-Dme-032004	Drosophila melanogaster	28.52	1.00e-27	115.00
IUUC-Ete-032837	Echinops telfairi	36.51	7.00e-44	168.00
IUUC-Eca-033291	Equus caballus	32.78	2.00e-43	167.00
IUUC-Eeu-035347	Erinaceus europaeus	33.77	7.00e-41	158.00
IUUC-Fca-036577	Felis catus	31.45	2.00e-42	164.00
IUUC-Fal-036810	Ficedula albicollis	32.89	5.00e-41	159.00
IUUC-Fox-037844	Fusarium oxysporum	28.30	8.00e-29	119.00
IUUC-Fso-038338	Fusarium solani	27.83	3.00e-29	120.00
IUUC-Gmo-038537	Gadus morhua	35.21	2.00e-38	150.00
IUUC-Ggr-039772	Gaeumannomyces graminis	26.32	2.00e-25	108.00
IUUC-Gga-040566	Gallus gallus	33.81	9.00e-48	181.00
IUUC-Gac-042422	Gasterosteus aculeatus	35.22	8.00e-44	168.00
IUUC-Gma-044199	Glycine max	25.08	8.00e-20	89.00
IUUC-Ggo-045365	Gorilla gorilla	27.00	1.00e-22	98.60
IUUC-Hsa-046121	Homo sapiens	32.74	4.00e-42	162.00
IUUC-Itr-048361	Ictidomys tridecemlineatus	33.64	1.00e-40	158.00
IUUC-Lch-049767	Latimeria chalumnae	35.55	5.00e-44	169.00
IUUC-Loc-051940	Lepisosteus oculatus	36.12	2.00e-38	150.00
IUUC-Lma-053288	Leptosphaeria maculans	27.11	4.00e-25	107.00
IUUC-Laf-054463	Loxodonta africana	33.04	2.00e-40	157.00
IUUC-Mcc-055412	Macaca mulatta	31.95	5.00e-41	159.00
IUUC-Mor-056986	Magnaporthe oryzae	27.13	1.00e-25	108.00
IUUC-Mpo-057401	Magnaporthe poae	25.98	3.00e-26	110.00
IUUC-Mtr-057886	Medicago truncatula	25.22	2.00e-17	80.90
IUUC-Mla-058862	Melampsora laricipopulina	25.00	7.00e-20	89.70
IUUC-Mga-060109	Meleagris gallopavo	34.67	2.00e-46	177.00
IUUC-Mvi-060326	Microbotryum violaceum	28.73	4.00e-33	134.00
IUUC-Mmr-060681	Microcebus murinus	34.62	3.00e-44	170.00
IUUC-Mdo-063004	Monodelphis domestica	34.11	2.00e-41	160.00
IUUC-Mmu-064184	Mus musculus	32.01	2.00e-40	157.00
IUUC-Mac-064987	Musa acuminata	26.89	2.00e-24	104.00
IUUC-Mpu-065847	Mustela putorius furo	32.54	1.00e-41	161.00
IUUC-Mlu-067608	Myotis lucifugus	32.84	2.00e-43	167.00
IUUC-Nfi-068531	Neosartorya fischeri	27.23	2.00e-26	111.00
IUUC-Nle-069302	Nomascus leucogenys	32.35	1.00e-41	161.00
IUUC-Ont-072591	Oreochromis niloticus	33.55	7.00e-37	145.00
IUUC-Oan-073558	Ornithorhynchus anatinus	34.89	2.00e-32	130.00
IUUC-Ocu-074558	Oryctolagus cuniculus	34.64	6.00e-39	152.00
IUUC-Ogl-076960	Oryza glaberrima	22.65	2.00e-10	57.40
IUUC-Ogu-078660	Oryza glumaepatula	22.13	1.00e-09	55.50
IUUC-Oin-079790	Oryza indica	23.30	2.00e-15	73.90
IUUC-Ome-081631	Oryza meridionalis	22.22	7.00e-08	49.30
IUUC-Oni-083082	Oryza nivara	22.22	3.00e-10	57.00
IUUC-Opu-083394	Oryza punctata	21.51	6.00e-13	66.20
IUUC-Oru-084461	Oryza rufipogon	22.08	5.00e-11	59.70
IUUC-Ola-086955	Oryzias latipes	32.18	4.00e-43	166.00
IUUC-Olu-087657	Ostreococcus lucimarinus	22.70	2.00e-13	68.20
IUUC-Oga-088108	Otolemur garnettii	34.12	4.00e-43	166.00
IUUC-Oar-090019	Ovis aries	33.99	2.00e-43	167.00
IUUC-Ptr-091544	Pan troglodytes	32.74	4.00e-42	163.00
IUUC-Pan-092562	Papio anubis	32.25	8.00e-42	162.00
IUUC-Psi-094025	Pelodiscus sinensis	37.02	5.00e-30	122.00
IUUC-Pma-094322	Petromyzon marinus	33.33	3.00e-37	146.00
IUUC-Pno-095112	Phaeosphaeria nodorum	27.66	6.00e-19	86.70
IUUC-Ppa-095541	Physcomitrella patens	28.30	2.00e-24	104.00
IUUC-Pfo-096667	Poecilia formosa	34.45	2.00e-35	140.00
IUUC-Pab-098064	Pongo abelii	33.33	1.00e-42	164.00
IUUC-Pop-099969	Populus trichocarpa	29.53	2.00e-25	107.00
IUUC-Pca-101053	Procavia capensis	32.57	6.00e-40	155.00
IUUC-Ppe-101839	Prunus persica	25.60	2.00e-21	94.00
IUUC-Pva-102963	Pteropus vampyrus	33.53	6.00e-39	152.00
IUUC-Pgr-103276	Puccinia graminis	33.75	1.00e-24	105.00
IUUC-Ptt-103769	Puccinia triticina	34.93	9.00e-23	99.00
IUUC-Pte-104117	Pyrenophora teres	27.41	3.00e-23	101.00
IUUC-Pyt-104649	Pyrenophora triticirepentis	27.22	4.00e-23	100.00
IUUC-Rno-105975	Rattus norvegicus	33.88	1.00e-39	155.00
IUUC-Sce-106226	Saccharomyces cerevisiae	46.70	3.00e-88	317.00
IUUC-Sha-106907	Sarcophilus harrisii	34.02	3.00e-43	166.00
IUUC-Sja-107867	Schizosaccharomyces japonicus	27.98	4.00e-18	83.20
IUUC-Spo-108377	Schizosaccharomyces pombe	26.35	3.00e-18	83.60
IUUC-Ssl-108647	Sclerotinia sclerotiorum	26.68	1.00e-22	98.60
IUUC-Smo-109068	Selaginella moellendorffii	27.42	3.00e-23	100.00
IUUC-Sit-110114	Setaria italica	22.88	4.00e-10	56.60
IUUC-Sly-111581	Solanum lycopersicum	28.36	2.00e-20	91.30
IUUC-Stu-112770	Solanum tuberosum	27.84	7.00e-21	92.40
IUUC-Sbi-114797	Sorghum bicolor	21.12	4.00e-07	46.60
IUUC-Sre-114941	Sporisorium reilianum	33.46	2.00e-34	138.00
IUUC-Ssc-116346	Sus scrofa	32.05	6.00e-43	166.00
IUUC-Tgu-116628	Taeniopygia guttata	35.88	3.00e-44	169.00
IUUC-Tru-117646	Takifugu rubripes	32.00	6.00e-38	149.00
IUUC-Tsy-119593	Tarsius syrichta	28.46	4.00e-21	93.60
IUUC-Tni-119872	Tetraodon nigroviridis	32.62	1.00e-41	160.00
IUUC-Tca-121500	Theobroma cacao	29.56	3.00e-28	116.00
IUUC-Tre-122151	Trichoderma reesei	25.94	8.00e-25	106.00
IUUC-Tvi-122619	Trichoderma virens	27.11	4.00e-24	103.00
IUUC-Tae-124450	Triticum aestivum	22.85	8.00e-07	45.40
IUUC-Tme-127158	Tuber melanosporum	24.69	3.00e-21	94.00
IUUC-Tbe-127959	Tupaia belangeri	33.12	7.00e-41	158.00
IUUC-Ttr-129125	Tursiops truncatus	32.45	4.00e-43	166.00
IUUC-Uma-129567	Ustilago maydis	32.61	6.00e-36	143.00
IUUC-Vda-129955	Verticillium dahliae	26.79	6.00e-23	99.80
IUUC-Vpa-130157	Vicugna pacos	40.83	2.00e-31	127.00
IUUC-Vvi-131065	Vitis vinifera	27.51	3.00e-22	97.10
IUUC-Xtr-132601	Xenopus tropicalis	28.95	3.00e-27	113.00
IUUC-Xma-133142	Xiphophorus maculatus	34.31	2.00e-40	157.00
IUUC-Yli-134580	Yarrowia lipolytica	36.48	2.00e-56	211.00
IUUC-Zma-135330	Zea mays	23.46	1.00e-17	81.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence