iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028287

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 35-1; Zgc:110667

Genbank Nucleotide ID

BX469930

Gene Name

trim35-1; zgc:110667

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000052037.4	ENSDART00000073777.2	ENSDARP00000068267.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.50e-09	38.0	5	74
E3 activity/RING/RING	8.60e-10	39.9	9	49

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           +++ C++  +++rdPv l +G+++ r++I  + +s+g+  cP++rq    +  v n +lr++ ++++ +++
   Q: 5    DDLSCAVCTDVFRDPVLLGCGHSFCRQCIYDHWSSSGTrNCPICRQVS-RQRPVANVSLRNTCESYLLREQ 74
           6889*************************9988666666******976.8889*************98876 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           Ca+C + f+d p++l+CgH f+++C+  +w     sss++ +CP+Cr
   Q: 9    CAVCTDVFRD-PVLLGCGHSFCRQCIyDHW-----SSSGTRNCPICR 49
           ********99.999************9***.....8**********8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSLEDDLSCA VCTDVFRDPV LLGCGHSFCR QCIYDHWSSS GTRNCPICRQ VSRQRPVANV 60
SLRNTCESYL LREQNTRTDR KDEDEQPCPV HGEKIELFCQ NDEQLLCARC RKCGHGWHKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATGCTAAA ATCAGTAAGC AGTTTGCATG TTTCTGTCTT CGCCAGTGTT TAGTCTCGAT 60
TAGTTTTCAG CGCACTTTCG TTATTCTCCG TGTAAATGTC GCTTGAGGAT GACCTGTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003613--Ubox_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00504--Ubox

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005622--C:intracellular
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

dre:553197

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010857	Astyanax mexicanus	42.04	8.00e-114	404.00
IUUC-Pop-099295	Populus trichocarpa	37.14	5.00e-08	53.90
IUUC-Ppe-101916	Prunus persica	38.46	3.00e-11	64.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence