iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-086442

Ensembl Protein ID

ENSORLP00000006468.1

UniProt Accession

H2LKB7; H2LKB7_ORYLA

Genbank Protein ID

ENSORLP00000006468

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04017570

Gene Name

srm

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000005130.1	ENSORLT00000006469.1	ENSORLP00000006468.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	28.85	2.00e-03	30.40	IUUC-Ots-000041

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryzias latipes

Protein Sequence
(Fasta)

VMDHIKDGWF TESCALWPGQ AMSLQVEEVL YNKKSKFQDV MVFKSKTYGN VLVLDGVIQC 60
TERDEFAYQE MIANLPLCSH PCPKKVLVIG GGDGGVLREV VKHPLVESVV LCEIDEDVIN 120

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Nucleotide Sequence
(Fasta)

ACTCGCAAAA CACGTTAGTC TTACCTGTGG CTTCTGGCAG CTGTCATGGA CCACATTAAA 60
GATGGGTGGT TTACGGAGTC GTGCGCGTTG TGGCCCGGGC AAGCGATGAG CCTTCAGGTG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0620--Polyamine biosynthesis
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR030374--PABS
IPR030373--PABS_CS
IPR029063--SAM-dependent_MTases
IPR001045--Spermi_synthase
IPR030668--Spermi_synthase_euk

PROSITE

PS01330--PABS_1
PS51006--PABS_2

Gene Ontology

GO:0016740--F:transferase activity
GO:0008295--P:spermidine biosynthetic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025303	Ciona intestinalis	66.67	5.00e-112	397.00
IUUC-Csv-025917	Ciona savignyi	63.99	3.00e-108	384.00
IUUC-Dre-028585	Danio rerio	87.89	1.00e-146	511.00
IUUC-Gmo-039381	Gadus morhua	88.07	4.00e-145	506.00
IUUC-Gac-041821	Gasterosteus aculeatus	88.42	7.00e-136	476.00
IUUC-Hsa-046850	Homo sapiens	80.20	9.00e-40	154.00
IUUC-Nle-069521	Nomascus leucogenys	78.35	5.00e-117	413.00
IUUC-Xtr-132478	Xenopus tropicalis	81.21	7.00e-138	483.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence