iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086904

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04087796

Gene Name

RNF38 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000014353.1	ENSORLT00000017999.1	ENSORLP00000017998.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-08	35.8	426	467

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++df+    ++vlpC+H fha+C+ kw       + + +CP+Cr
   Q: 426  CVVCMCDFESRqlLRVLPCNHEFHAKCVDKW------LKANRTCPICR 467
           ********4434599****************......**********8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

SEESPSPKRQ RMSSHSVLEQ LTSSAPPPST PSPPIRPWES GPPSRRQPHH HPLYHQERCL 60
TPVRLRRSPP ARRQRGRLSR PSRPPPPHHH SPPPAPGGGA AAAEEPRAFH PPTVSPRLLH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGAGGAAA GTCCAAGTCC AAAGCGCCAG AGGATGTCCA GCCATTCTGT CCTGGAACAG 60
CTCACTTCAT CCGCACCCCC TCCGTCCACG CCCTCTCCCC CCATTCGCCC GTGGGAGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003122	Amborella trichopoda	45.95	5.00e-15	75.90
IUUC-Aly-005825	Arabidopsis lyrata	40.00	6.00e-14	71.20
IUUC-Ath-007389	Arabidopsis thaliana	40.00	5.00e-14	71.60
IUUC-Bdi-014369	Brachypodium distachyon	38.38	1.00e-16	80.50
IUUC-Bra-017837	Brassica rapa	40.00	3.00e-14	72.40
IUUC-Cho-024540	Choloepus hoffmanni	60.57	2.00e-71	263.00
IUUC-Cin-025552	Ciona intestinalis	63.21	2.00e-36	144.00
IUUC-Dre-028201	Danio rerio	73.61	5.00e-116	411.00
IUUC-Dse-031302	Dothistroma septosporum	47.73	5.00e-11	62.80
IUUC-Dme-032187	Drosophila melanogaster	65.60	3.00e-45	177.00
IUUC-Gmo-038591	Gadus morhua	79.88	3.00e-128	451.00
IUUC-Gac-042255	Gasterosteus aculeatus	89.38	1.00e-145	509.00
IUUC-Gma-042757	Glycine max	45.83	3.00e-15	75.90
IUUC-Hvu-047198	Hordeum vulgare	37.37	7.00e-16	77.40
IUUC-Lpe-051226	Leersia perrieri	44.74	2.00e-15	77.00
IUUC-Mtr-057973	Medicago truncatula	47.22	4.00e-16	79.00
IUUC-Mac-065545	Musa acuminata	39.58	1.00e-16	80.10
IUUC-Ont-072424	Oreochromis niloticus	81.62	3.00e-170	591.00
IUUC-Oba-075053	Oryza barthii	35.96	3.00e-15	75.50
IUUC-Obr-076920	Oryza brachyantha	38.14	9.00e-16	77.00
IUUC-Ogl-077938	Oryza glaberrima	38.46	2.00e-15	76.60
IUUC-Ogu-078097	Oryza glumaepatula	35.85	1.00e-15	77.40
IUUC-Oin-080031	Oryza indica	38.46	1.00e-15	76.60
IUUC-Ome-081728	Oryza meridionalis	35.96	3.00e-15	75.50
IUUC-Oni-082915	Oryza nivara	37.11	1.00e-15	75.50
IUUC-Opu-083391	Oryza punctata	38.14	5.00e-16	78.20
IUUC-Oru-085011	Oryza rufipogon	35.96	3.00e-15	75.50
IUUC-Osa-085452	Oryza sativa	38.46	1.00e-15	76.60
IUUC-Pfo-096604	Poecilia formosa	85.68	1.00e-160	560.00
IUUC-Pop-099843	Populus trichocarpa	37.78	1.00e-16	80.10
IUUC-Ppe-102055	Prunus persica	36.67	6.00e-16	77.80
IUUC-Sit-109831	Setaria italica	38.46	3.00e-16	79.30
IUUC-Stu-112327	Solanum tuberosum	47.95	2.00e-15	77.00
IUUC-Sbi-114529	Sorghum bicolor	47.14	4.00e-15	75.50
IUUC-Tru-118715	Takifugu rubripes	64.86	3.00e-127	448.00
IUUC-Tni-120282	Tetraodon nigroviridis	65.34	1.00e-136	479.00
IUUC-Tca-121858	Theobroma cacao	41.11	1.00e-16	80.90
IUUC-Tae-123101	Triticum aestivum	38.46	2.00e-16	79.70
IUUC-Tur-126249	Triticum urartu	37.37	1.00e-15	76.30
IUUC-Tbe-127237	Tupaia belangeri	72.81	2.00e-75	276.00
IUUC-Vvi-131462	Vitis vinifera	38.89	3.00e-17	82.40
IUUC-Xma-133395	Xiphophorus maculatus	84.92	1.00e-159	556.00
IUUC-Zma-135972	Zea mays	31.90	5.00e-16	79.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence