• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Tur-126532
Ensembl Protein ID TRIUR3_33198-P1
UniProt Accession M8AQE6; M8AQE6_TRIUA
Genbank Protein ID EMS67340.1
Protein Name U4/U6 small nuclear ribonucleoprotein PRP4-like protein
Genbank Nucleotide ID KD020484
Gene Name TRIUR3_33198
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
TRIUR3_33198 TRIUR3_33198-T1 TRIUR3_33198-P1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.10e-31 106.8 263 299
UBD/Beta-Prp 3.90e-53 181.3 139 370
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
    gH+ sv++++f +d l +s++ D + +vWDlr+g+l
   Q: 263 GHSRSVYGVSFhPDgSLAASCGLDANARVWDLRSGRL 299
    8***********998999*****************97 PP
   


   UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsf 102
    ++ ++t fs+d s+lat+s++g ikvw++ + +++++l+gh++ t+v fsp ++ l+t+s D+t+k+w+ +g+ ++++ gh d++ ++f
   Q: 139 DDRPLTGCSFSRDASMLATSSWSGIIKVWSMPQITKIATLKGHTERATDVAFSPVDNCLATASADKTAKLWNR-DGSLLMSFDGHLDRLARVAF 231
    6789999****************************************************************95.689***************** PP
   S: 103 spsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelv 196
    +psg++l ++s d+t r+wd++tg++l +++gh+++v +v++hpdg+l +s++lD r+Wdl++g+l tl g h ++v +sf++ng ++
   Q: 232 HPSGKYLGTASFDKTWRLWDINTGTELL-LQEGHSRSVYGVSFHPDGSLAASCGLDANARVWDLRSGRLYCTLIG-HVKPVLGVSFSPNGHLVA 323
    ****************************.*********************************************9.****************** PP
   S: 197 sgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssD 243
    ++s+d+ ++wdl+t ++v++ +h++ ++ v+f p++ +++ +ss
   Q: 324 TASEDNFCRIWDLRTRQMVYSIPAHKSLISHVKFEPQEGYYLATSSY 370
    ***********************************888888777754 PP
   

Organism Triticum urartu
Protein Sequence
(Fasta)
MAVPTNDSAV RARLRRLGEP ITLFGEREME RRDRLRALMV RLEADGQFDR LLRAQEDEQG 60
APGDDDDMEQ IQYPFFTEGT NQLLQARVDI AMYSLPRAKA RVDSAKRRLA GPDEDPEAEA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Tur-126532|E3,WD_repeat;UBD,Beta-Prp|Triticum urartu
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCCGTGC CCACCAACGA CTCCGCCGTG CGCGCGCGCC TCCGCCGTCT CGGCGAGCCC 60
ATCACGCTCT TCGGCGAGCG CGAGATGGAG CGCCGCGACC GCCTACGCGC ACTCATGGTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Tur-126532|E3,WD_repeat;UBD,Beta-Prp|Triticum urartu
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000771 Aegilops tauschii 97.33 0.00e+00 712.00
IUUC-Aml-001737 Ailuropoda melanoleuca 43.86 2.00e-90 325.00
IUUC-Atr-002828 Amborella trichopoda 64.80 2.00e-142 498.00
IUUC-Apl-003723 Anas platyrhynchos 43.08 2.00e-89 322.00
IUUC-Aca-004972 Anolis carolinensis 43.34 6.00e-88 317.00
IUUC-Aly-006531 Arabidopsis lyrata 66.93 1.00e-137 482.00
IUUC-Ath-007367 Arabidopsis thaliana 65.51 3.00e-149 520.00
IUUC-Acl-008236 Aspergillus clavatus 40.48 1.00e-62 233.00
IUUC-Afl-008522 Aspergillus flavus 40.38 5.00e-66 244.00
IUUC-Afu-008904 Aspergillus fumigatus 38.74 3.00e-68 251.00
IUUC-Ani-009198 Aspergillus nidulans 40.65 3.00e-67 248.00
IUUC-Ang-009662 Aspergillus niger 38.70 2.00e-68 252.00
IUUC-Aor-009881 Aspergillus oryzae 40.38 3.00e-66 245.00
IUUC-Ate-010333 Aspergillus terreus 38.55 3.00e-64 238.00
IUUC-Ame-011697 Astyanax mexicanus 42.04 1.00e-88 319.00
IUUC-Bgr-012254 Blumeria graminis 37.83 4.00e-69 254.00
IUUC-Bta-012615 Bos taurus 43.60 4.00e-90 324.00
IUUC-Bci-013720 Botrytis cinerea 39.30 3.00e-70 258.00
IUUC-Bdi-014302 Brachypodium distachyon 91.20 0.00e+00 663.00
IUUC-Bol-015594 Brassica oleracea 67.91 3.00e-141 494.00
IUUC-Bra-017465 Brassica rapa 67.38 2.00e-140 491.00
IUUC-Cja-019747 Callithrix jacchus 43.86 9.00e-91 326.00
IUUC-Cfa-020288 Canis familiaris 43.86 1.00e-90 325.00
IUUC-Cpo-021440 Cavia porcellus 43.60 1.00e-89 322.00
IUUC-Cho-024481 Choloepus hoffmanni 42.93 2.00e-88 318.00
IUUC-Cgl-026538 Colletotrichum gloeosporioides 39.19 2.00e-68 253.00
IUUC-Cne-026793 Cryptococcus neoformans 42.62 4.00e-79 287.00
IUUC-Dre-028723 Danio rerio 43.34 4.00e-91 327.00
IUUC-Dno-029299 Dasypus novemcinctus 43.86 1.00e-90 326.00
IUUC-Dse-031562 Dothistroma septosporum 37.57 2.00e-62 232.00
IUUC-Ete-032669 Echinops telfairi 44.13 3.00e-91 328.00
IUUC-Eca-033566 Equus caballus 43.86 2.00e-90 325.00
IUUC-Eeu-034524 Erinaceus europaeus 49.57 9.00e-69 253.00
IUUC-Fca-036215 Felis catus 43.86 1.00e-90 326.00
IUUC-Fal-037018 Ficedula albicollis 43.05 5.00e-86 310.00
IUUC-Fox-037936 Fusarium oxysporum 37.87 7.00e-62 230.00
IUUC-Fso-038366 Fusarium solani 38.93 6.00e-67 247.00
IUUC-Ggr-039942 Gaeumannomyces graminis 38.44 4.00e-60 224.00
IUUC-Gga-040797 Gallus gallus 43.08 9.00e-90 323.00
IUUC-Gma-044220 Glycine max 68.09 3.00e-135 474.00
IUUC-Ggo-044682 Gorilla gorilla 43.86 2.00e-90 325.00
IUUC-Hsa-045804 Homo sapiens 43.86 1.00e-90 326.00
IUUC-Hvu-047607 Hordeum vulgare 95.73 0.00e+00 714.00
IUUC-Itr-047882 Ictidomys tridecemlineatus 44.13 4.00e-91 327.00
IUUC-Lpe-051333 Leersia perrieri 85.07 3.00e-171 593.00
IUUC-Loc-052164 Lepisosteus oculatus 42.56 9.00e-90 323.00
IUUC-Lma-053088 Leptosphaeria maculans 38.74 4.00e-67 248.00
IUUC-Laf-053460 Loxodonta africana 43.86 1.00e-90 326.00
IUUC-Mcc-055859 Macaca mulatta 43.86 1.00e-90 326.00
IUUC-Meu-056134 Macropus eugenii 43.34 2.00e-90 325.00
IUUC-Mor-057251 Magnaporthe oryzae 39.26 3.00e-68 251.00
IUUC-Mtr-057656 Medicago truncatula 66.93 5.00e-138 483.00
IUUC-Mla-059145 Melampsora laricipopulina 42.75 1.00e-76 279.00
IUUC-Mga-059855 Meleagris gallopavo 43.08 9.00e-90 323.00
IUUC-Mmr-060826 Microcebus murinus 43.86 9.00e-91 326.00
IUUC-Mdo-062748 Monodelphis domestica 43.34 6.00e-90 323.00
IUUC-Mmu-063351 Mus musculus 43.86 1.00e-90 325.00
IUUC-Mac-064846 Musa acuminata 74.07 5.00e-150 523.00
IUUC-Mpu-066006 Mustela putorius furo 43.86 1.00e-90 326.00
IUUC-Mlu-067722 Myotis lucifugus 44.13 2.00e-91 328.00
IUUC-Nfi-068399 Neosartorya fischeri 38.48 8.00e-70 256.00
IUUC-Ncr-068711 Neurospora crassa 40.52 4.00e-74 271.00
IUUC-Nle-069982 Nomascus leucogenys 43.86 9.00e-91 326.00
IUUC-Opr-070596 Ochotona princeps 43.60 3.00e-90 325.00
IUUC-Ont-072374 Oreochromis niloticus 43.86 2.00e-88 318.00
IUUC-Ocu-074371 Oryctolagus cuniculus 43.60 3.00e-90 324.00
IUUC-Oba-075083 Oryza barthii 88.53 1.00e-179 621.00
IUUC-Obr-076405 Oryza brachyantha 86.93 5.00e-178 616.00
IUUC-Ogl-077683 Oryza glaberrima 88.53 7.00e-180 622.00
IUUC-Ogu-078486 Oryza glumaepatula 88.00 7.00e-180 622.00
IUUC-Oin-079679 Oryza indica 87.73 0.00e+00 639.00
IUUC-Ome-081230 Oryza meridionalis 87.73 0.00e+00 639.00
IUUC-Oni-082961 Oryza nivara 87.73 0.00e+00 640.00
IUUC-Opu-083189 Oryza punctata 88.00 2.00e-180 624.00
IUUC-Oru-084353 Oryza rufipogon 87.73 0.00e+00 639.00
IUUC-Osa-085458 Oryza sativa 87.73 0.00e+00 639.00
IUUC-Olu-087580 Ostreococcus lucimarinus 45.36 2.00e-69 255.00
IUUC-Oga-088703 Otolemur garnettii 41.36 2.00e-84 305.00
IUUC-Oar-089829 Ovis aries 44.13 9.00e-91 326.00
IUUC-Ptr-090838 Pan troglodytes 43.86 1.00e-90 326.00
IUUC-Pan-092261 Papio anubis 43.75 4.00e-89 320.00
IUUC-Psi-093020 Pelodiscus sinensis 42.56 3.00e-89 321.00
IUUC-Pno-094858 Phaeosphaeria nodorum 41.48 1.00e-66 246.00
IUUC-Ppa-095531 Physcomitrella patens 59.08 9.00e-127 446.00
IUUC-Pop-100051 Populus trichocarpa 66.84 7.00e-136 476.00
IUUC-Pca-100152 Procavia capensis 43.86 2.00e-90 325.00
IUUC-Ppe-101244 Prunus persica 65.51 9.00e-132 462.00
IUUC-Pva-102529 Pteropus vampyrus 41.51 1.00e-81 296.00
IUUC-Pgr-103550 Puccinia graminis 43.73 4.00e-82 298.00
IUUC-Ptt-103951 Puccinia triticina 40.11 9.00e-69 253.00
IUUC-Pte-104151 Pyrenophora teres 37.82 3.00e-59 221.00
IUUC-Pyt-104571 Pyrenophora triticirepentis 36.80 8.00e-59 220.00
IUUC-Rno-105747 Rattus norvegicus 44.13 7.00e-91 327.00
IUUC-Sha-107334 Sarcophilus harrisii 43.34 2.00e-90 325.00
IUUC-Sja-107794 Schizosaccharomyces japonicus 37.37 5.00e-59 220.00
IUUC-Spo-108189 Schizosaccharomyces pombe 40.72 3.00e-76 278.00
IUUC-Ssl-108550 Sclerotinia sclerotiorum 38.21 8.00e-70 256.00
IUUC-Smo-108924 Selaginella moellendorffii 58.56 2.00e-126 444.00
IUUC-Sit-110102 Setaria italica 86.74 6.00e-178 616.00
IUUC-Sly-111668 Solanum lycopersicum 69.87 2.00e-137 481.00
IUUC-Stu-111928 Solanum tuberosum 70.13 4.00e-138 483.00
IUUC-Sbi-114134 Sorghum bicolor 88.06 8.00e-180 622.00
IUUC-Sre-115114 Sporisorium reilianum 42.86 2.00e-77 281.00
IUUC-Ssc-115443 Sus scrofa 43.86 2.00e-90 325.00
IUUC-Tgu-117157 Taeniopygia guttata 42.82 3.00e-90 324.00
IUUC-Tru-118587 Takifugu rubripes 44.13 4.00e-91 327.00
IUUC-Tni-120427 Tetraodon nigroviridis 43.37 6.00e-91 327.00
IUUC-Tca-121368 Theobroma cacao 69.15 3.00e-146 511.00
IUUC-Tre-122074 Trichoderma reesei 39.01 6.00e-68 250.00
IUUC-Tvi-122349 Trichoderma virens 38.40 1.00e-66 246.00
IUUC-Tae-124076 Triticum aestivum 100.00 0.00e+00 743.00
IUUC-Ttr-129169 Tursiops truncatus 39.35 7.00e-51 193.00
IUUC-Uma-129399 Ustilago maydis 39.66 5.00e-73 267.00
IUUC-Vda-129842 Verticillium dahliae 40.21 1.00e-71 262.00
IUUC-Vpa-130440 Vicugna pacos 43.60 1.00e-90 325.00
IUUC-Vvi-131075 Vitis vinifera 67.37 2.00e-137 481.00
IUUC-Yli-134569 Yarrowia lipolytica 38.60 9.00e-65 239.00
IUUC-Zma-135799 Zea mays 82.34 0.00e+00 626.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved