• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Lch-050565
Ensembl Protein ID ENSLACP00000020033.1
UniProt Accession H3BDR2; H3BDR2_LATCH
Genbank Protein ID ENSLACP00000020033
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01010948
Gene Name DDB1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000017611.1 ENSLACT00000020171.1 ENSLACP00000020033.1
ENSLACG00000017611.1 ENSLACT00000020172.1 ENSLACP00000020034.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DDB1 0 1762.1 1 1142
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DDB1
   S: 2    mldrYvvtarkpsavvklvvgnftshkelNLliaksnrieiflvtpeglrpvvevklegsiavlrlfrpknekkdllfilteryntl 88
           m+++Yvvta+kp+av ++++g+fts+++lNLliak++r+ei++vtpeglrpv+ev ++g+iav++lfrpk+e+kdllfilt++yn++
   Q: 1    MSYNYVVTAQKPTAVSACITGHFTSAEDLNLLIAKNTRLEIYVVTPEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNAC 87
           799************************************************************************************ PP
   S: 89   ilelrdidessevvtradgevlDdigrssdsGlinviepkirlialelyqglfklIvldndikelkafnirleelnvsdvkflillt 175
           ile+++ ++s++++tra+g+v+D+igr+s++G+i++i+p++r+i+l+ly+glfk+I+l++++kelkafnirleel+v+dvkfl++++
   Q: 88   ILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLERENKELKAFNIRLEELQVIDVKFLYGCQ 174
           *************************************************************************************** PP
   S: 176  qptgrvlviyqdddgkhlktyelslkdKeFvkis.kqesiekeaellipvpsqlvgvlvlgeesivyksadnykdvdPylirqstai 261
            pt  ++++yqd++g+h+ktye+sl++KeF+k++ kqe++e+ea+++i+vp++++g++++g+esi+y+++d+y +++P++i+qst++
   Q: 175  VPT--ICFVYQDPQGRHVKTYEVSLREKEFNKGPwKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIV 259
           ***..********************************************************************************** PP
   S: 262  ryervdnngirylLgdfdGelkllllsaeeemsG.vevkslkielLgeisiaesisyldngllfvgsrfgdsQlvklisestgkgsy 347
           +++rvd ng+rylLgd++G+l++lll++ee+m+G v++k+l++elLge+siae+++yldng++fvgsr+gdsQlvkl+++s+++gsy
   Q: 260  CHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGtVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSY 346
           *************************************************************************************** PP
   S: 348  vvilerfknlkpIvdlvvvdldrrgqgqvvtvsgaskdGslRvirlgigieelasvdlkgvigllslkstidestdnslvlafvset 434
           v ++e+f+nl+pIvd++vvdl+r+gqgq+vt+sga+k+GslR+ir+gigi+e+as+dl+g++gl++l+s++ ++td++lvl+fv++t
   Q: 347  VAVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSESLQDTDDMLVLSFVGQT 433
           *************************************************************************************** PP
   S: 435  kvlnlntgeeledtelsgvlsdlqtlltqdvidykqllqvTsqsvrLvssqikrllkeWkaknleiigvassNteqvliaatsndlv 521
           +vl ln gee+e+tel g+++d+qt+ + +v +++ql+q+Ts svrLv ++ k l+ eWk++n+++i+vas+N +qv++a+ ++ l+
   Q: 434  RVLILN-GEEVEETELPGFVDDQQTFYCGNV-AHHQLIQITSGSVRLVTQEPKTLVGEWKEPNGKNISVASCNNSQVVVAV-GRVLY 517
           ******.************************.9999********************************************9.***** PP
   S: 522  yleigdgeldltstttlenevavldlinieddpnlsdleavglltdiskrililpdletiykeklggeiipRsilltefEnvtYlLi 608
           ylei ++el ++s t++e+eva+ld+++++d++  s l+avgl+tdis ril lp++e+++ke+lggeiipRsil+t+fE+ +YlL+
   Q: 518  YLEIRPKELAQMSCTEMEHEVACLDITPLGDSNGTSPLCAVGLWTDISSRILRLPTFEMLHKEMLGGEIIPRSILMTTFEGSHYLLC 604
           *************************************************************************************** PP
   S: 609  algdGalvsyildidtgdesdakksnlgtspgtlktfkslsttqvfassDrPtvIyssskkLvfSnVnlkeVqylCsldseaypdsl 695
           algdGal+++ ldi++g +sd+kk++lgt+p++l+tf+slstt+vfa+sDrPtvIyss++kLvfSnVnlkeV+y+C+l+se+ypdsl
   Q: 605  ALGDGALFYFGLDIESGMLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSL 691
           *************************************************************************************** PP
   S: 696  alanngslvigtvddiqklkiRsiplgeslrriayqesvitfgvisdrreldf.klklkalrnnasilalvpdiennklfsdglril 781
           alann++l+igt+d+iqkl+iR++pl+es+rri+yqe++++fgv+s+r e+++ ++++ +lr++as++al+++++++klf +++  +
   Q: 692  ALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEMQDvSGGTSTLRPSASTQALSSSVSSSKLFPSSTSPH 778
           *************************************************************************************** PP
   S: 782  elseleenevnfllvlDkntfelllaqdlrewEtavsllSqklkdDseeyyvvktalvlpeenelkkgrilvfsvedslklkLltva 868
           e+s++ee+ev+++l++D++tfe+l+a+++ ++E+a+sl+S+kl++Ds++y+vv+ta+v+pee+e+k+gri+vf+++ds   kL+tva
   Q: 779  ETSFGEEVEVHNMLIIDQHTFEVLHAHQFLQNEYAISLVSCKLGKDSNTYFVVGTAMVYPEEPEPKQGRIVVFQYSDS---KLQTVA 862
           ******************************************************************************...****** PP
   S: 869  ekkvkgavidlvklNgkllaainseirlyewkvmgtdekelrkeCernntilaLtlktrkdfivVgDlmrsvtLllykdlegsfeEs 955
           ek+vkgav+++v++Ngklla+ins++rlyew    t ekelr+eC+++n+i+aL+lkt++dfi+VgDlmrsv Ll+yk +eg+feE+
   Q: 863  EKEVKGAVYSMVEFNGKLLASINSTVRLYEW----TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 945
           *******************************....**************************************************** PP
   S: 956  ardynlewmsaveilnddiflgaencgNlfvvkkdikagltdeerslleevgefrlgefvevfrfgtlvlqdvgerevnrssevifg 1042
            rd+n++wmsaveil+dd+flgaen++Nlfv++kd +a++tdeer++l+evg f+lgefv+vf++g+lv+q++ge++++++++v+fg
   Q: 946  GRDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD-SAAATDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFG 1031
           ***********************************.*************************************************** PP
   S: 1043 tengeigvilrlrrellkflrnlestlkkvikrvakieHs..syRsFetekrterasgfvdgdLiesilDlsrdkavdilkvl.yek 1126
           t+ng+ig++++l++ ++++l +++++l+kvik+v+kieHs   +RsF+te++te+a+gf+dgdLies+lD+sr+k+++++++l  ++
   Q: 1032 TVNGMIGLVTSLSETWYNLLLDVQTRLNKVIKSVGKIEHSlfTWRSFHTERKTEP
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MSYNYVVTAQ KPTAVSACIT GHFTSAEDLN LLIAKNTRLE IYVVTPEGLR PVKEVGMYGK 60
IAVMELFRPK GESKDLLFIL TAKYNACILE YKQNGDSIDI ITRAHGNVQD RIGRPSETGI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050565|E3,DDB1|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCCTACA ACTACGTGGT AACGGCGCAG AAACCCACCG CCGTCAGTGC TTGCATTACG 60
GGTAAGTCGT TGAGGCCTCG GAGAGCCGGG TGGCGGTGGG AGTTTGTGTG GGAGGAGGCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050565|E3,DDB1|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
Pfam

PF03178--CPSF_A
Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000120 Aegilops tauschii 50.08 0.00e+00 1133.00
IUUC-Aml-002096 Ailuropoda melanoleuca 93.61 0.00e+00 2183.00
IUUC-Atr-002742 Amborella trichopoda 52.53 0.00e+00 1181.00
IUUC-Apl-003624 Anas platyrhynchos 93.02 0.00e+00 2140.00
IUUC-Aca-005085 Anolis carolinensis 93.61 0.00e+00 2183.00
IUUC-Aly-005857 Arabidopsis lyrata 52.70 0.00e+00 1182.00
IUUC-Ath-006658 Arabidopsis thaliana 52.79 0.00e+00 1181.00
IUUC-Acl-008149 Aspergillus clavatus 27.24 1.00e-104 374.00
IUUC-Afl-008549 Aspergillus flavus 28.61 2.00e-109 390.00
IUUC-Afu-009076 Aspergillus fumigatus 27.32 2.00e-113 403.00
IUUC-Ani-009302 Aspergillus nidulans 27.09 2.00e-88 320.00
IUUC-Ang-009636 Aspergillus niger 27.95 8.00e-91 328.00
IUUC-Aor-010073 Aspergillus oryzae 28.64 4.00e-114 405.00
IUUC-Ate-010422 Aspergillus terreus 27.32 1.00e-104 374.00
IUUC-Ame-011643 Astyanax mexicanus 80.92 0.00e+00 1831.00
IUUC-Bgr-012164 Blumeria graminis 26.59 6.00e-97 349.00
IUUC-Bta-012494 Bos taurus 93.52 0.00e+00 2181.00
IUUC-Bci-013957 Botrytis cinerea 26.43 2.00e-88 321.00
IUUC-Bdi-014186 Brachypodium distachyon 52.53 0.00e+00 1178.00
IUUC-Bol-015922 Brassica oleracea 53.22 0.00e+00 1196.00
IUUC-Bra-017300 Brassica rapa 53.22 0.00e+00 1189.00
IUUC-Cel-018239 Caenorhabditis elegans 37.27 0.00e+00 772.00
IUUC-Cja-019165 Callithrix jacchus 93.52 0.00e+00 2182.00
IUUC-Cfa-020406 Canis familiaris 93.61 0.00e+00 2183.00
IUUC-Cpo-022154 Cavia porcellus 93.17 0.00e+00 2170.00
IUUC-Cre-022557 Chlamydomonas reinhardtii 40.46 0.00e+00 783.00
IUUC-Csa-024061 Chlorocebus sabaeus 93.52 0.00e+00 2182.00
IUUC-Cho-024554 Choloepus hoffmanni 87.55 0.00e+00 895.00
IUUC-Cin-025466 Ciona intestinalis 61.87 0.00e+00 1478.00
IUUC-Csv-026370 Ciona savignyi 60.07 0.00e+00 1310.00
IUUC-Cgl-026595 Colletotrichum gloeosporioides 25.89 1.00e-98 355.00
IUUC-Cme-027342 Cyanidioschyzon merolae 27.70 2.00e-114 407.00
IUUC-Dre-027448 Danio rerio 91.40 0.00e+00 1016.00
IUUC-Dno-029794 Dasypus novemcinctus 93.14 0.00e+00 2052.00
IUUC-Dor-030789 Dipodomys ordii 78.82 0.00e+00 922.00
IUUC-Dse-031491 Dothistroma septosporum 27.82 1.00e-112 401.00
IUUC-Dme-031940 Drosophila melanogaster 60.59 0.00e+00 1363.00
IUUC-Ete-032913 Echinops telfairi 76.48 0.00e+00 819.00
IUUC-Eca-033777 Equus caballus 92.91 0.00e+00 2162.00
IUUC-Eeu-034900 Erinaceus europaeus 90.40 0.00e+00 1062.00
IUUC-Fca-035869 Felis catus 93.61 0.00e+00 2183.00
IUUC-Fal-036777 Ficedula albicollis 93.79 0.00e+00 2185.00
IUUC-Fox-037954 Fusarium oxysporum 26.31 2.00e-104 374.00
IUUC-Fso-038292 Fusarium solani 25.59 2.00e-106 380.00
IUUC-Gmo-038815 Gadus morhua 81.50 0.00e+00 957.00
IUUC-Ggr-039907 Gaeumannomyces graminis 25.61 3.00e-92 333.00
IUUC-Gga-040995 Gallus gallus 93.70 0.00e+00 2189.00
IUUC-Gac-042390 Gasterosteus aculeatus 89.48 0.00e+00 1978.00
IUUC-Gma-042743 Glycine max 52.14 0.00e+00 1149.00
IUUC-Ggo-044891 Gorilla gorilla 93.53 0.00e+00 2180.00
IUUC-Hsa-046709 Homo sapiens 93.52 0.00e+00 2182.00
IUUC-Hvu-047504 Hordeum vulgare 52.13 0.00e+00 1157.00
IUUC-Itr-048678 Ictidomys tridecemlineatus 93.61 0.00e+00 2183.00
IUUC-Lpe-051260 Leersia perrieri 53.05 0.00e+00 1176.00
IUUC-Loc-052091 Lepisosteus oculatus 82.59 0.00e+00 1476.00
IUUC-Lma-053246 Leptosphaeria maculans 25.67 5.00e-105 375.00
IUUC-Laf-053502 Loxodonta africana 93.35 0.00e+00 2178.00
IUUC-Mcc-054802 Macaca mulatta 93.56 0.00e+00 2165.00
IUUC-Meu-056808 Macropus eugenii 90.72 0.00e+00 1385.00
IUUC-Mor-057253 Magnaporthe oryzae 27.16 6.00e-64 239.00
IUUC-Mpo-057562 Magnaporthe poae 25.33 9.00e-91 328.00
IUUC-Mtr-057743 Medicago truncatula 51.18 0.00e+00 1146.00
IUUC-Mla-059154 Melampsora laricipopulina 26.71 5.00e-71 263.00
IUUC-Mga-059824 Meleagris gallopavo 93.85 0.00e+00 2061.00
IUUC-Mvi-060279 Microbotryum violaceum 26.85 3.00e-110 393.00
IUUC-Mmr-061215 Microcebus murinus 93.26 0.00e+00 2166.00
IUUC-Mdo-062028 Monodelphis domestica 92.27 0.00e+00 1808.00
IUUC-Mmu-064327 Mus musculus 93.52 0.00e+00 2180.00
IUUC-Mac-065445 Musa acuminata 52.74 0.00e+00 1151.00
IUUC-Mpu-065814 Mustela putorius furo 90.54 0.00e+00 2088.00
IUUC-Mlu-067136 Myotis lucifugus 93.43 0.00e+00 2174.00
IUUC-Nfi-068355 Neosartorya fischeri 27.32 8.00e-108 385.00
IUUC-Ncr-068620 Neurospora crassa 26.00 3.00e-89 323.00
IUUC-Nle-069566 Nomascus leucogenys 93.56 0.00e+00 2154.00
IUUC-Opr-070915 Ochotona princeps 85.48 0.00e+00 1769.00
IUUC-Ont-071753 Oreochromis niloticus 90.98 0.00e+00 2102.00
IUUC-Oan-073187 Ornithorhynchus anatinus 93.71 0.00e+00 1977.00
IUUC-Ocu-074619 Oryctolagus cuniculus 93.70 0.00e+00 2184.00
IUUC-Oba-075091 Oryza barthii 44.65 0.00e+00 880.00
IUUC-Obr-076425 Oryza brachyantha 53.26 0.00e+00 1177.00
IUUC-Ogu-078794 Oryza glumaepatula 53.05 0.00e+00 1179.00
IUUC-Oin-079725 Oryza indica 52.61 0.00e+00 1164.00
IUUC-Olo-080842 Oryza longistaminata 51.03 0.00e+00 1073.00
IUUC-Ome-081818 Oryza meridionalis 53.14 0.00e+00 1183.00
IUUC-Oni-082879 Oryza nivara 52.35 0.00e+00 1157.00
IUUC-Opu-083361 Oryza punctata 52.45 0.00e+00 1172.00
IUUC-Oru-084781 Oryza rufipogon 53.05 0.00e+00 1181.00
IUUC-Osa-086293 Oryza sativa 53.05 0.00e+00 1181.00
IUUC-Ola-086881 Oryzias latipes 90.30 0.00e+00 2086.00
IUUC-Olu-087674 Ostreococcus lucimarinus 45.28 0.00e+00 951.00
IUUC-Oga-089056 Otolemur garnettii 93.70 0.00e+00 2183.00
IUUC-Oar-089457 Ovis aries 93.60 0.00e+00 2147.00
IUUC-Ptr-091179 Pan troglodytes 93.51 0.00e+00 2144.00
IUUC-Pan-092019 Papio anubis 93.36 0.00e+00 2176.00
IUUC-Psi-093407 Pelodiscus sinensis 93.61 0.00e+00 2146.00
IUUC-Pma-094272 Petromyzon marinus 86.64 0.00e+00 1843.00
IUUC-Pno-094864 Phaeosphaeria nodorum 26.86 3.00e-112 399.00
IUUC-Ppa-095885 Physcomitrella patens 53.12 0.00e+00 1159.00
IUUC-Pfo-096083 Poecilia formosa 90.72 0.00e+00 2095.00
IUUC-Pab-098652 Pongo abelii 89.28 0.00e+00 2053.00
IUUC-Pop-099593 Populus trichocarpa 52.66 0.00e+00 1130.00
IUUC-Pca-100189 Procavia capensis 91.96 0.00e+00 1246.00
IUUC-Ppe-101987 Prunus persica 52.22 0.00e+00 1111.00
IUUC-Pva-102605 Pteropus vampyrus 93.43 0.00e+00 2177.00
IUUC-Pgr-103659 Puccinia graminis 24.29 4.00e-74 273.00
IUUC-Ptt-103884 Puccinia triticina 23.72 7.00e-60 226.00
IUUC-Pte-104233 Pyrenophora teres 26.96 3.00e-115 409.00
IUUC-Pyt-104454 Pyrenophora triticirepentis 27.45 3.00e-113 403.00
IUUC-Rno-106004 Rattus norvegicus 93.52 0.00e+00 2181.00
IUUC-Sha-106726 Sarcophilus harrisii 91.60 0.00e+00 1985.00
IUUC-Sja-107864 Schizosaccharomyces japonicus 24.28 3.00e-75 276.00
IUUC-Spo-108029 Schizosaccharomyces pombe 26.13 4.00e-102 366.00
IUUC-Ssl-108441 Sclerotinia sclerotiorum 26.27 2.00e-81 297.00
IUUC-Smo-108808 Selaginella moellendorffii 52.62 0.00e+00 1201.00
IUUC-Sit-109735 Setaria italica 53.26 0.00e+00 1172.00
IUUC-Sly-111520 Solanum lycopersicum 52.21 0.00e+00 1152.00
IUUC-Sar-113606 Sorex araneus 85.89 8.00e-123 434.00
IUUC-Sbi-114539 Sorghum bicolor 52.29 0.00e+00 1161.00
IUUC-Sre-114936 Sporisorium reilianum 24.63 7.00e-61 229.00
IUUC-Ssc-116038 Sus scrofa 93.43 0.00e+00 2178.00
IUUC-Tgu-117512 Taeniopygia guttata 93.35 0.00e+00 2175.00
IUUC-Tru-117593 Takifugu rubripes 89.68 0.00e+00 2072.00
IUUC-Tsy-119513 Tarsius syrichta 89.10 0.00e+00 1127.00
IUUC-Tni-120551 Tetraodon nigroviridis 84.86 0.00e+00 1695.00
IUUC-Tca-121505 Theobroma cacao 52.92 0.00e+00 1150.00
IUUC-Tre-122136 Trichoderma reesei 25.94 7.00e-102 365.00
IUUC-Tvi-122512 Trichoderma virens 25.10 1.00e-100 361.00
IUUC-Tae-124186 Triticum aestivum 52.13 0.00e+00 1158.00
IUUC-Tur-126451 Triticum urartu 52.53 0.00e+00 1049.00
IUUC-Tme-127057 Tuber melanosporum 28.89 7.00e-111 395.00
IUUC-Ttr-128891 Tursiops truncatus 87.50 0.00e+00 1384.00
IUUC-Uma-129583 Ustilago maydis 25.16 3.00e-51 197.00
IUUC-Vda-129870 Verticillium dahliae 25.16 9.00e-92 332.00
IUUC-Vpa-130117 Vicugna pacos 89.06 0.00e+00 1649.00
IUUC-Vvi-131033 Vitis vinifera 52.14 0.00e+00 1151.00
IUUC-Xtr-131987 Xenopus tropicalis 91.10 0.00e+00 2099.00
IUUC-Xma-134117 Xiphophorus maculatus 88.73 0.00e+00 2044.00
IUUC-Zma-134758 Zea mays 53.31 0.00e+00 1179.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved