iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098486

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01263831

Gene Name

RNF6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000005228.2	ENSPPYT00000006189.1	ENSPPYP00000005954.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.90e-06	26.6	632	673

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +d+   + ++ lpC H fh +C+ +w       s + +CP+Cr
   Q: 632  CSVCISDYvtGNKLRQLPCMHEFHIHCIDRW------LSENCTCPICR 673
           9*******7744499****************......**********8 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MNQSRSRSDG GSEETLSQDH NHHENERRWQ QERLHREEAY YQFINELNDE DYRLMRDHNL 60
LGTPGEITSE ELQQRLDGVK EQLASQPDFR DGTNYRDSEV PRESSHEDSL LEWLNTFRRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTGAGGCT CGGTTGGGAA GAGGTTGGTT GGGCCGCTTG TGCCCACTTT GTTTATCGTA 60
GTGGGGCTCG TCCCCCGGCG CGAGCTTCCG TCGCAACGGC CGGGAAAGAA ACCAGTAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0030424--C:axon
GO:0005737--C:cytoplasm
GO:0031965--C:nuclear membrane
GO:0016605--C:PML body
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030517--P:negative regulation of axon extension
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0044314--P:protein K27-linked ubiquitination
GO:0070936--P:protein K48-linked ubiquitination
GO:0085020--P:protein K6-linked ubiquitination
GO:0060765--P:regulation of androgen receptor signaling pathway
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000811	Aegilops tauschii	37.29	3.00e-08	50.80
IUUC-Aml-001415	Ailuropoda melanoleuca	88.61	0.00e+00	1077.00
IUUC-Atr-002558	Amborella trichopoda	32.73	1.00e-13	71.20
IUUC-Apl-003834	Anas platyrhynchos	59.88	0.00e+00	664.00
IUUC-Aca-004373	Anolis carolinensis	49.70	2.00e-141	496.00
IUUC-Ath-006611	Arabidopsis thaliana	40.82	1.00e-16	80.50
IUUC-Ame-011730	Astyanax mexicanus	64.01	2.00e-89	323.00
IUUC-Bta-012763	Bos taurus	73.91	0.00e+00	874.00
IUUC-Bdi-014235	Brachypodium distachyon	38.89	1.00e-14	74.30
IUUC-Bra-017280	Brassica rapa	44.44	1.00e-15	75.90
IUUC-Cja-018980	Callithrix jacchus	93.28	0.00e+00	1181.00
IUUC-Cfa-020416	Canis familiaris	88.92	0.00e+00	1103.00
IUUC-Cpo-022086	Cavia porcellus	75.04	0.00e+00	859.00
IUUC-Csa-023246	Chlorocebus sabaeus	96.79	0.00e+00	1219.00
IUUC-Cho-024749	Choloepus hoffmanni	83.63	0.00e+00	888.00
IUUC-Dre-028428	Danio rerio	63.10	1.00e-87	317.00
IUUC-Dno-029617	Dasypus novemcinctus	86.48	0.00e+00	1035.00
IUUC-Dor-030800	Dipodomys ordii	83.69	4.00e-144	504.00
IUUC-Ete-032882	Echinops telfairi	74.25	9.00e-150	523.00
IUUC-Eca-033892	Equus caballus	89.49	0.00e+00	1162.00
IUUC-Eeu-034563	Erinaceus europaeus	85.88	2.00e-117	416.00
IUUC-Fca-035765	Felis catus	87.45	0.00e+00	1069.00
IUUC-Fal-036981	Ficedula albicollis	57.22	2.00e-174	605.00
IUUC-Gmo-039344	Gadus morhua	63.89	2.00e-97	349.00
IUUC-Gga-041114	Gallus gallus	72.30	2.00e-118	420.00
IUUC-Gac-042220	Gasterosteus aculeatus	63.32	6.00e-98	351.00
IUUC-Ggo-044902	Gorilla gorilla	98.54	0.00e+00	1279.00
IUUC-Hsa-046548	Homo sapiens	98.69	0.00e+00	1278.00
IUUC-Itr-048447	Ictidomys tridecemlineatus	89.05	0.00e+00	1121.00
IUUC-Lch-050541	Latimeria chalumnae	54.73	2.00e-102	366.00
IUUC-Lpe-051237	Leersia perrieri	44.00	5.00e-14	70.90
IUUC-Laf-054296	Loxodonta africana	80.85	0.00e+00	972.00
IUUC-Mcc-054858	Macaca mulatta	96.35	0.00e+00	1241.00
IUUC-Meu-056296	Macropus eugenii	65.85	1.00e-138	486.00
IUUC-Mga-059307	Meleagris gallopavo	70.47	3.00e-112	399.00
IUUC-Mmr-060699	Microcebus murinus	91.53	0.00e+00	1177.00
IUUC-Mdo-062162	Monodelphis domestica	68.65	0.00e+00	769.00
IUUC-Mmu-064188	Mus musculus	71.88	0.00e+00	823.00
IUUC-Mac-065618	Musa acuminata	47.06	1.00e-13	69.30
IUUC-Mpu-065891	Mustela putorius furo	88.03	0.00e+00	1073.00
IUUC-Mlu-067177	Myotis lucifugus	87.10	0.00e+00	1019.00
IUUC-Nle-069127	Nomascus leucogenys	98.10	0.00e+00	1284.00
IUUC-Ont-072086	Oreochromis niloticus	62.80	1.00e-98	354.00
IUUC-Ocu-074281	Oryctolagus cuniculus	90.44	4.00e-69	253.00
IUUC-Oba-075390	Oryza barthii	44.00	1.00e-13	69.70
IUUC-Obr-076264	Oryza brachyantha	42.67	1.00e-13	69.70
IUUC-Ogl-077537	Oryza glaberrima	42.25	2.00e-13	68.20
IUUC-Ogu-078922	Oryza glumaepatula	34.68	1.00e-14	73.90
IUUC-Oin-079430	Oryza indica	49.06	3.00e-13	68.90
IUUC-Olo-080832	Oryza longistaminata	44.00	1.00e-13	69.70
IUUC-Ome-081556	Oryza meridionalis	40.86	2.00e-15	75.50
IUUC-Oni-082313	Oryza nivara	34.68	2.00e-14	73.90
IUUC-Opu-083678	Oryza punctata	36.46	2.00e-13	70.90
IUUC-Oru-084552	Oryza rufipogon	44.00	1.00e-13	69.70
IUUC-Osa-086209	Oryza sativa	49.06	3.00e-13	68.90
IUUC-Ola-087452	Oryzias latipes	63.73	1.00e-98	353.00
IUUC-Oga-088750	Otolemur garnettii	89.62	0.00e+00	1131.00
IUUC-Oar-089523	Ovis aries	73.62	0.00e+00	848.00
IUUC-Ptr-091533	Pan troglodytes	98.54	0.00e+00	1276.00
IUUC-Pan-092675	Papio anubis	96.35	0.00e+00	1218.00
IUUC-Psi-093735	Pelodiscus sinensis	60.52	0.00e+00	688.00
IUUC-Pfo-096637	Poecilia formosa	60.87	1.00e-96	347.00
IUUC-Pop-099068	Populus trichocarpa	42.25	5.00e-14	70.10
IUUC-Pca-100143	Procavia capensis	80.05	2.00e-167	582.00
IUUC-Pva-103151	Pteropus vampyrus	81.02	0.00e+00	1000.00
IUUC-Rno-105745	Rattus norvegicus	71.13	0.00e+00	756.00
IUUC-Sha-106681	Sarcophilus harrisii	68.88	0.00e+00	773.00
IUUC-Sit-110544	Setaria italica	40.54	5.00e-14	72.40
IUUC-Sar-113229	Sorex araneus	86.87	3.00e-140	491.00
IUUC-Sbi-113902	Sorghum bicolor	39.24	1.00e-13	70.50
IUUC-Ssc-115345	Sus scrofa	63.88	4.00e-83	301.00
IUUC-Tgu-117477	Taeniopygia guttata	57.87	1.00e-165	576.00
IUUC-Tru-118302	Takifugu rubripes	62.00	3.00e-97	349.00
IUUC-Tsy-119338	Tarsius syrichta	75.07	0.00e+00	859.00
IUUC-Tni-119675	Tetraodon nigroviridis	58.82	3.00e-85	309.00
IUUC-Tca-120922	Theobroma cacao	50.00	8.00e-14	70.90
IUUC-Tae-122971	Triticum aestivum	39.44	9.00e-14	70.10
IUUC-Tbe-127505	Tupaia belangeri	71.57	2.00e-111	396.00
IUUC-Ttr-128367	Tursiops truncatus	79.51	0.00e+00	878.00
IUUC-Vpa-130480	Vicugna pacos	83.49	2.00e-144	506.00
IUUC-Xma-133863	Xiphophorus maculatus	61.41	5.00e-97	348.00
IUUC-Yli-134656	Yarrowia lipolytica	48.94	2.00e-10	60.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence