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Tag Content
UUCD2 ID IUUC-Bdi-014904
UUCD1 version UUC-BrD-01640
Ensembl Protein ID BRADI2G04830.1
UniProt Accession I1HCK4; I1HCK4_BRADI
Genbank Protein ID KQK02987.1
Protein Name Ubiquitinyl hydrolase 1
Genbank Nucleotide ID CM000881
Gene Name LOC100833268; BRADI_2g04830
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BRADI2G04830 BRADI2G04830.1 BRADI2G04830.1
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 1.90e-53 182.4 310 792
UBD/Alpha-Helix/UBA 1.90e-14 53.8 669 708
Active Site
Position(s) Description Evidence
319 Nucleophile {ECO:0000256|PIRSR:PIRSR016308-1}
755 Proton acceptor {ECO:0000256|PIRSR:PIRSR016308-1}
Domain Profile

   DUB/USP
   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelw........kskkkavsprellkalkkeaeefsg 86
           tGl NlgN+CYm S++Q++++++++ + ++e +  ++  + ++ +p+ +l ++++kl + ++        ++ ++ + pr++++++++ ++efs+
   Q: 310  TGLANLGNSCYMASIMQVMFSTHPFISRYFEkQSLKAAFAISQADPTLDLNMQMTKLAHGMLsgkysvrnQEGQEGIRPRMFKSVIAANHPEFSS 404
           7************************99988832233333445689999*************76666666677788******************** PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs.sreepfldlslpvpgke 180
           ++qqDa +f+ +l+d+++++                           + +++ ++  + F++ ++++++c++ + ++ +r +  l+ls+p+++ +
   Q: 405  MRQQDALDFFLHLIDKVDQAN--------------------------PGNHELNPF-TGFKFVIEERVQCPSGKVSYnKRSDYILSLSIPLHEAS 472
           *****************9988..........................455555555.67***********9977777555566666666666666 PP
   S: 181  etkke.............................slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksr 246
           ++  e                              l+ cL+sf+ e+e+ +   +y++  ++k++a k+ ++k++P++L+l++ +f + e+++++
   Q: 473  NK--EqlevfnekkaamdldgkevsneevvrprvPLEACLASFSGEDEIPD---FYSTALNSKTTAIKTAGFKTFPDYLVLQMRKF-VMEAGWVP 561
           55..4459*****************************************97...********************************.77889*** PP
   S: 247  ekinkkvefpleLdlspfcts.......................................................................... 267
           +k++ ++++p+ +d+s++ ++                                                                          
   Q: 562  KKLDVYIDVPDIIDISHMRSKgvqpgeellpegascgskaepaqpvanedivsqlasmgfnyfhcqkaaintsntgveeamnwllshmddpdidd 656
           ****************9999999999999999998888888888888888888888888888888888777777777777777777777777777 PP
   S: 268  .............peekqke...............................................................kkkYeLiavvvH 286
                        +     e                                                               + +Y+L+a v+H
   Q: 657  plsqdqkpsedaiD-----EssvqtlvsfgfqedvarmalkasggnieratdwvfshpeasssvsaesstsnvkdddshipdgSGRYKLVAFVSH 746
           66666665555550.....0555555555555555555566666666666666666666666667777777788899999999************ PP
   S: 287  sG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +G s+++GHYva+v + +g+W  f+DskV ++   +  +   + +Y++f++r
   Q: 747  MGtSTHCGHYVAHVLK-DGRWAIFNDSKVAAS--VDLPK---DMGYLYFFQR 792
           ****************.9***********999..68888...999**99997 PP
   

   UBD/Alpha-Helix/UBA
   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           +de+ ++ lv+ GF ++ a+ aL a+++n+e+A+++++++
   Q: 669  IDESSVQTLVSFGFQEDVARMALKASGGNIERATDWVFSH 708
           699***********************************97 PP
   
Organism Brachypodium distachyon
Protein Sequence
(Fasta)
MDLLRSRLHK VRIPEPTNRI HKDECCVSFD TPRSEGGLYV DMNSFLGFGK EHVAWNFEKT 60
ENPVYLHIVQ RRKPEPDEAD RPLKKPTLLA IGVEGGFTDQ EPEYDVTYEI VILPEFISLP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Bdi-014904|DUB,USP;UBD,UBA|Brachypodium distachyon
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGATCTCC TCCGCTCGCG CCTCCACAAG GTCCGCATCC CGGAGCCCAC CAACCGCATC 60
CACAAGGACG AGTGCTGCGT CTCCTTCGAC ACCCCTGTAA ACCACCCTCC CTCACCCCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Bdi-014904|DUB,USP;UBD,UBA|Brachypodium distachyon
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001394--Peptidase_C19_UCH
IPR015940--UBA
IPR009060--UBA-like
IPR016652--Ubiquitinyl_hydrolase
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP
PROSITE

PS50030--UBA
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP
Pfam

PF00627--UBA
PF00443--UCH
PF02148--zf-UBP
SMART

SM00165--UBA
SM00290--ZnF_UBP
Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process
KEGG bdi:100833268
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000394 Aegilops tauschii 85.58 0.00e+00 1332.00
IUUC-Aml-002104 Ailuropoda melanoleuca 46.96 0.00e+00 735.00
IUUC-Atr-002580 Amborella trichopoda 74.54 9.00e-178 616.00
IUUC-Apl-003774 Anas platyrhynchos 48.00 0.00e+00 721.00
IUUC-Aca-005368 Anolis carolinensis 48.45 0.00e+00 759.00
IUUC-Aly-005727 Arabidopsis lyrata 69.49 0.00e+00 1137.00
IUUC-Ath-006974 Arabidopsis thaliana 70.11 0.00e+00 1139.00
IUUC-Ago-007890 Ashbya gossypii 27.07 6.00e-71 261.00
IUUC-Acl-008057 Aspergillus clavatus 34.77 3.00e-114 405.00
IUUC-Afl-008547 Aspergillus flavus 36.32 6.00e-107 380.00
IUUC-Afu-008805 Aspergillus fumigatus 38.31 6.00e-105 374.00
IUUC-Ani-009441 Aspergillus nidulans 35.50 2.00e-94 338.00
IUUC-Ang-009720 Aspergillus niger 34.23 1.00e-107 383.00
IUUC-Aor-010111 Aspergillus oryzae 34.72 1.00e-115 410.00
IUUC-Ate-010531 Aspergillus terreus 31.74 6.00e-97 347.00
IUUC-Ame-011470 Astyanax mexicanus 41.14 0.00e+00 639.00
IUUC-Bgr-012183 Blumeria graminis 32.68 4.00e-104 371.00
IUUC-Bta-013179 Bos taurus 47.19 0.00e+00 740.00
IUUC-Bci-013858 Botrytis cinerea 33.91 1.00e-109 390.00
IUUC-Bol-015296 Brassica oleracea 69.98 0.00e+00 1137.00
IUUC-Bra-017939 Brassica rapa 69.95 0.00e+00 1136.00
IUUC-Cel-018625 Caenorhabditis elegans 33.13 5.00e-112 397.00
IUUC-Cja-019063 Callithrix jacchus 46.26 0.00e+00 731.00
IUUC-Cfa-020976 Canis familiaris 48.62 0.00e+00 754.00
IUUC-Cpo-022265 Cavia porcellus 48.62 0.00e+00 756.00
IUUC-Cre-022640 Chlamydomonas reinhardtii 41.16 6.00e-120 424.00
IUUC-Csa-024177 Chlorocebus sabaeus 48.98 0.00e+00 663.00
IUUC-Cho-024522 Choloepus hoffmanni 34.96 6.00e-125 440.00
IUUC-Cin-025411 Ciona intestinalis 43.54 0.00e+00 626.00
IUUC-Csv-026347 Ciona savignyi 41.97 1.00e-175 608.00
IUUC-Cgl-026667 Colletotrichum gloeosporioides 32.43 3.00e-98 352.00
IUUC-Cne-026831 Cryptococcus neoformans 34.60 8.00e-116 410.00
IUUC-Cme-027335 Cyanidioschyzon merolae 30.54 5.00e-37 149.00
IUUC-Dre-027651 Danio rerio 42.25 0.00e+00 679.00
IUUC-Dno-029034 Dasypus novemcinctus 47.31 0.00e+00 746.00
IUUC-Dor-030130 Dipodomys ordii 37.90 2.00e-105 376.00
IUUC-Dse-031467 Dothistroma septosporum 34.55 8.00e-115 407.00
IUUC-Dme-032075 Drosophila melanogaster 44.43 0.00e+00 657.00
IUUC-Ete-032865 Echinops telfairi 43.51 0.00e+00 645.00
IUUC-Eca-034059 Equus caballus 47.20 0.00e+00 739.00
IUUC-Eeu-035304 Erinaceus europaeus 44.03 0.00e+00 657.00
IUUC-Fca-035515 Felis catus 47.31 0.00e+00 744.00
IUUC-Fal-037271 Ficedula albicollis 48.43 0.00e+00 701.00
IUUC-Fox-037745 Fusarium oxysporum 34.04 1.00e-112 399.00
IUUC-Fso-038158 Fusarium solani 33.33 2.00e-108 386.00
IUUC-Gmo-039071 Gadus morhua 43.97 0.00e+00 639.00
IUUC-Ggr-040098 Gaeumannomyces graminis 32.89 5.00e-105 374.00
IUUC-Gga-040635 Gallus gallus 47.55 0.00e+00 754.00
IUUC-Gac-042528 Gasterosteus aculeatus 42.74 0.00e+00 650.00
IUUC-Gma-043614 Glycine max 68.44 0.00e+00 1096.00
IUUC-Ggo-044602 Gorilla gorilla 47.31 0.00e+00 742.00
IUUC-Hsa-045959 Homo sapiens 47.31 0.00e+00 742.00
IUUC-Hvu-047563 Hordeum vulgare 88.92 0.00e+00 1132.00
IUUC-Itr-048712 Ictidomys tridecemlineatus 46.96 0.00e+00 747.00
IUUC-Kpa-049156 Komagataella pastoris 32.05 1.00e-106 380.00
IUUC-Lch-049648 Latimeria chalumnae 47.41 0.00e+00 738.00
IUUC-Lpe-051523 Leersia perrieri 86.85 0.00e+00 1410.00
IUUC-Loc-052072 Lepisosteus oculatus 41.99 0.00e+00 646.00
IUUC-Lma-053216 Leptosphaeria maculans 34.98 3.00e-107 383.00
IUUC-Laf-054327 Loxodonta africana 47.19 0.00e+00 743.00
IUUC-Mcc-055443 Macaca mulatta 47.31 0.00e+00 740.00
IUUC-Meu-056298 Macropus eugenii 50.00 3.00e-151 528.00
IUUC-Mor-057106 Magnaporthe oryzae 34.03 6.00e-110 390.00
IUUC-Mpo-057589 Magnaporthe poae 33.13 3.00e-106 379.00
IUUC-Mtr-058680 Medicago truncatula 67.57 0.00e+00 1117.00
IUUC-Mla-058903 Melampsora laricipopulina 32.97 3.00e-104 372.00
IUUC-Mga-059669 Meleagris gallopavo 47.47 0.00e+00 708.00
IUUC-Mvi-060476 Microbotryum violaceum 32.27 6.00e-98 351.00
IUUC-Mmr-060575 Microcebus murinus 47.54 0.00e+00 742.00
IUUC-Mdo-062183 Monodelphis domestica 47.56 0.00e+00 741.00
IUUC-Mmu-063592 Mus musculus 47.42 0.00e+00 743.00
IUUC-Mac-065446 Musa acuminata 63.83 0.00e+00 1072.00
IUUC-Mpu-066082 Mustela putorius furo 48.62 0.00e+00 745.00
IUUC-Mlu-067345 Myotis lucifugus 46.50 0.00e+00 736.00
IUUC-Nfi-068558 Neosartorya fischeri 35.74 5.00e-116 410.00
IUUC-Ncr-068960 Neurospora crassa 32.19 1.00e-98 353.00
IUUC-Nle-070173 Nomascus leucogenys 48.62 0.00e+00 752.00
IUUC-Opr-070556 Ochotona princeps 46.96 0.00e+00 751.00
IUUC-Ont-071502 Oreochromis niloticus 45.11 0.00e+00 655.00
IUUC-Oan-072959 Ornithorhynchus anatinus 53.10 1.00e-64 238.00
IUUC-Ocu-074861 Oryctolagus cuniculus 48.26 0.00e+00 760.00
IUUC-Oba-075109 Oryza barthii 87.66 0.00e+00 1413.00
IUUC-Obr-076292 Oryza brachyantha 89.18 0.00e+00 1402.00
IUUC-Ogl-077065 Oryza glaberrima 90.05 0.00e+00 1469.00
IUUC-Ogu-078776 Oryza glumaepatula 87.66 0.00e+00 1434.00
IUUC-Oin-080048 Oryza indica 89.67 0.00e+00 1461.00
IUUC-Olo-080711 Oryza longistaminata 85.71 0.00e+00 1320.00
IUUC-Ome-081506 Oryza meridionalis 87.65 0.00e+00 1334.00
IUUC-Oni-082320 Oryza nivara 85.43 0.00e+00 1405.00
IUUC-Opu-083801 Oryza punctata 88.79 0.00e+00 1394.00
IUUC-Oru-085139 Oryza rufipogon 85.19 0.00e+00 1400.00
IUUC-Osa-085713 Oryza sativa 90.18 0.00e+00 1471.00
IUUC-Ola-086951 Oryzias latipes 42.44 0.00e+00 633.00
IUUC-Olu-087822 Ostreococcus lucimarinus 41.38 6.00e-166 577.00
IUUC-Oga-088625 Otolemur garnettii 46.42 0.00e+00 735.00
IUUC-Oar-089995 Ovis aries 46.55 0.00e+00 731.00
IUUC-Ptr-090640 Pan troglodytes 46.37 0.00e+00 739.00
IUUC-Pan-091974 Papio anubis 46.50 0.00e+00 733.00
IUUC-Psi-093957 Pelodiscus sinensis 47.09 0.00e+00 759.00
IUUC-Pma-094242 Petromyzon marinus 46.77 3.00e-99 354.00
IUUC-Pno-094835 Phaeosphaeria nodorum 36.09 1.00e-98 353.00
IUUC-Ppa-095901 Physcomitrella patens 61.56 0.00e+00 1021.00
IUUC-Pfo-097148 Poecilia formosa 44.22 0.00e+00 656.00
IUUC-Pab-098068 Pongo abelii 42.69 2.00e-178 619.00
IUUC-Pop-098943 Populus trichocarpa 71.80 0.00e+00 1141.00
IUUC-Pca-100738 Procavia capensis 44.32 5.00e-140 491.00
IUUC-Ppe-101315 Prunus persica 69.05 0.00e+00 1127.00
IUUC-Pva-102154 Pteropus vampyrus 46.84 0.00e+00 733.00
IUUC-Pgr-103343 Puccinia graminis 33.33 3.00e-98 352.00
IUUC-Ptt-103928 Puccinia triticina 29.53 3.00e-87 315.00
IUUC-Pte-104306 Pyrenophora teres 33.86 4.00e-94 338.00
IUUC-Pyt-104696 Pyrenophora triticirepentis 33.74 2.00e-98 352.00
IUUC-Rno-105801 Rattus norvegicus 47.66 0.00e+00 746.00
IUUC-Sce-106304 Saccharomyces cerevisiae 32.19 3.00e-70 259.00
IUUC-Sha-107635 Sarcophilus harrisii 48.92 0.00e+00 746.00
IUUC-Sja-107678 Schizosaccharomyces japonicus 33.13 6.00e-100 357.00
IUUC-Spo-108144 Schizosaccharomyces pombe 33.58 7.00e-107 380.00
IUUC-Smo-108703 Selaginella moellendorffii 58.81 0.00e+00 924.00
IUUC-Sit-110728 Setaria italica 89.43 0.00e+00 1469.00
IUUC-Sly-111523 Solanum lycopersicum 67.04 0.00e+00 1130.00
IUUC-Sar-113733 Sorex araneus 44.74 2.00e-89 323.00
IUUC-Sbi-114419 Sorghum bicolor 89.06 0.00e+00 1451.00
IUUC-Sre-115225 Sporisorium reilianum 33.29 1.00e-103 370.00
IUUC-Ssc-115686 Sus scrofa 46.25 0.00e+00 738.00
IUUC-Tgu-117346 Taeniopygia guttata 47.37 0.00e+00 734.00
IUUC-Tru-118350 Takifugu rubripes 42.49 0.00e+00 635.00
IUUC-Tsy-119278 Tarsius syrichta 38.93 2.00e-159 555.00
IUUC-Tni-120658 Tetraodon nigroviridis 42.42 0.00e+00 626.00
IUUC-Tca-121585 Theobroma cacao 70.00 0.00e+00 1130.00
IUUC-Tre-122043 Trichoderma reesei 33.62 4.00e-107 381.00
IUUC-Tvi-122303 Trichoderma virens 34.07 5.00e-107 381.00
IUUC-Tae-123798 Triticum aestivum 91.82 0.00e+00 1496.00
IUUC-Tur-126732 Triticum urartu 85.53 0.00e+00 1386.00
IUUC-Tme-126909 Tuber melanosporum 33.70 4.00e-99 355.00
IUUC-Tbe-127261 Tupaia belangeri 39.77 4.00e-115 408.00
IUUC-Ttr-129119 Tursiops truncatus 53.39 2.00e-107 382.00
IUUC-Uma-129599 Ustilago maydis 34.58 4.00e-115 408.00
IUUC-Vda-129688 Verticillium dahliae 33.00 6.00e-104 371.00
IUUC-Vpa-130170 Vicugna pacos 35.74 5.00e-141 494.00
IUUC-Vvi-131116 Vitis vinifera 71.15 0.00e+00 1132.00
IUUC-Xtr-131953 Xenopus tropicalis 45.69 0.00e+00 692.00
IUUC-Xma-133837 Xiphophorus maculatus 44.10 0.00e+00 654.00
IUUC-Yli-134510 Yarrowia lipolytica 34.20 5.00e-107 381.00
IUUC-Zma-135786 Zea mays 87.30 0.00e+00 1390.00
Created Date 25-Jun-2017

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