• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Ppa-095475
UUCD1 version UUC-PhP-00320
Ensembl Protein ID PP1S11_401V6.1
UniProt Accession A9RIU8; A9RIU8_PHYPA
Genbank Protein ID EDQ81257.1
Protein Name Predicted protein
Genbank Nucleotide ID DS544900
Gene Name PHYPADRAFT_114861
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S11_401V6 PP1S11_401V6.1 PP1S11_401V6.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-28 98.0 488 521
E3 activity/RING/U-box 5.70e-11 43.1 51 109
UBD/Beta-Prp 3.60e-41 142.0 395 694
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
    H+ + ++++f +d t+lvsGsdDg++k+W +r+
   Q: 488 HEKRAWSVDFsrTDpTMLVSGSDDGKVKLWCTRQ 521
    888899*****9889***************9876 PP
   


   E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrr 63
    ++flCpI + M+d + +++G+++ ++I +l+++++ cP ++ lt+++l Pn l +
   Q: 51 KDFLCPICIQTMKDACLTACGHSFCYACITTHLNNKKN-CPCCGLYLTNNQLFPNFLLNK 109
    68***********************************9.****************98866 PP
   


   UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkgh 93
    h ++ ++++ f +d++++atg+ +++ikv+++ t + ++s + + +++++++ k ++++ ++i vwd+++ + ++ +++h
   Q: 395 HSSNIVSSIEFDRDDEFFATGGVSRRIKVFEFATVVNeladvhcpVVEMSTRS-KLSCLSWNKYIKsHIASSDYEGIITVWDINKHQSIMEYEEH 488
    56778999**************************3335555555544444444.488888887765345555555******************** PP
   S: 94 edsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkl.lrtltgghtdsvys 185
    e++++s++fs+++ lvsGs+d +++w +++++ + +++ + ++cv+++p + n+++ Gs+D + +d+++ ++ l+ + g h ++v
   Q: 489 EKRAWSVDFSRTDpTMLVSGSDDGKVKLWCTRQESSVLNIDMKA--NICCVKYNPGScNYVAVGSADHHIHYFDVRNSQMpLYVFNG-HRKAVSY 580
    ***********8889**************988888886555554..59***************************777654999999.******* PP
   S: 186 lsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..dlrsgdllktlqlhn......ssvisvav 272
    ++f s + el+s+s+d+t++lwd+++++ +rtl+gh + + v ++ n+e++++gs+ + ++++ + + +++ + + s++is +
   Q: 581 VKFLS-SDELASASTDSTLRLWDVKENHAIRTLKGHANEKNFVGLTVNSEYIACGSESNEVFVYhkAMSKPATWHRFGSQDeesddtSHFISAVC 674
    ***99.68********************************************************6666667777777776699***999****** PP
   S: 273 lsfgdnvlvlgsedskvniw 292
    ++ + + ++++ + ++++++
   Q: 675 WKSESPTMLAANSQGTIKVL 694
    *****************997 PP
   

Organism Physcomitrella patens
Protein Sequence
(Fasta)
MEGGSGPFAQ GSVEPHVSSV ERVKQEPRTG YWSEDDVKCK VAVSTNSDLD KDFLCPICIQ 60
TMKDACLTAC GHSFCYACIT THLNNKKNCP CCGLYLTNNQ LFPNFLLNKL LVKASASQLC 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ppa-095475|E3,WD_repeat;E3,U-box;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGAGGGAG GGTCTGGGCC CTTTGCCCAA GGGTCGGTAG AGCCTCATGT ATCTTCCGTG 60
GAAAGGGTTA AGCAAGAACC ACGAACGGGC TACTGGTCGG AGGATGATGT CAAGTGCAAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ppa-095475|E3,WD_repeat;E3,U-box;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG ppp:PHYPADRAFT_114861
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Cho-024883 Choloepus hoffmanni 33.77 3.00e-45 176.00
IUUC-Dre-028453 Danio rerio 38.61 2.00e-130 459.00
IUUC-Lch-050420 Latimeria chalumnae 39.33 1.00e-130 459.00
IUUC-Ola-086727 Oryzias latipes 40.06 1.00e-130 459.00
IUUC-Pma-094587 Petromyzon marinus 37.46 7.00e-113 400.00
IUUC-Pca-100846 Procavia capensis 46.99 1.00e-108 386.00
IUUC-Sha-106514 Sarcophilus harrisii 46.45 3.00e-104 370.00
IUUC-Sar-113230 Sorex araneus 44.00 1.00e-72 266.00
IUUC-Tni-120893 Tetraodon nigroviridis 39.76 6.00e-125 440.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved