iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028663

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Si:ch211-165f21.4

Genbank Nucleotide ID

BX005156

Gene Name

si:ch211-165f21.4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000093835.2	ENSDART00000145458.2	ENSDARP00000122546.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.10e-47	163.8	260	594

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw...kskkkavsprellkalkkeaeefsgy 87
           Gl NlgNtCYmNSvLQcL++ip++++++l   ++++ +     ++  ll+ + +lf + +   +++ k+   r+++  ++++++ f+g 
   Q: 260  GLPNLGNTCYMNSVLQCLLSIPPFQHDVLL--SQEVWR-----DEDMLLSVFSDLFISRLdnsSTNLKKRLLRKVKCYIENASKVFTGD 341
           9****************************9..555543.....4579*********99986555566677778888889999999**** PP
   S: 88   eqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpv 176
            qqDa+Efl+  l+ l+ee +                        k  + + +  + +++++l+++ +c +c+ +++ +e+ +++sl +
   Q: 342  FQQDAHEFLMLSLSCLKEEGQ----------------------MLKMSSPTYTCPVANMEFKLETERTCVSCGLQKTFTEDANYISLVL 408
           *******************92......................3455666777888999****************************** PP
   S: 177  pgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfc 265
            ++      s++d+L++++++ +++    + c +c++ + a+ + ++ ++P+vL+l  +Rf +     s+ k+ +++++ +eL+ls++ 
   Q: 409  GQNA-----SVSDSLQQYMSASSVD----CMCCNCNGTK-ASVTQRFYSFPRVLVLLVSRFDM----LSDCKLRNRLKITEELTLSSVK 483
           ****.....9**************9....79****9866.99999****************54....55679**************888 PP
   S: 266  ts.................................peekqke.........kkkYeLiavvvHsG.slssGHYvayvknekgk.Wllfd 310
            +                                 p     +         +++Y+L++ v+H G +l sGHY++++++ +++ Wl+++
   Q: 484  GEireqpmsdnkrpascqsflkrilktntkvapqiP-----NdkqeepadtRVEYRLTGAVSHLGsKLFSGHYISHIRDPSDDgWLRCS 567
           887777777777766666666666666666666662.....04444466779***************************76666***** PP
   S: 311  DskVtevkeeevleetgstaYvlfYkr 337
           D +V++++++e  ee +++ Y+lfY +
   Q: 568  DFSVRKTSWTEASEEIKRNCYMLFYIK 594
           **************999********87 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MDRDIQQAEK MALKSKGEIK KRMRVMFPSS SVDLEDSSFS GPGDNGELPS PSSRKRRFPS 60
MRRVFGKILS ILMPCVCVSS EEEDPSFVSD RKTDASFSAA VHRSSEGHPE NDLPAGQQKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCGTG ACATTCAGCA AGCAGAGAAA ATGGCTTTGA AGAGCAAAGG GGAGATCAAG 60
AAAAGGATGA GGGTGATGTT TCCGTCTTCT TCGGTAGATC TGGAGGATTC GTCCTTTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence