iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005435

Ensembl Protein ID

fgenesh2_kg.8__897__AT5G50230.1

UniProt Accession

D7MPK4; D7MPK4_ARALL

Genbank Protein ID

EFH42038.1

Protein Name

Nucleotide binding protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_495081

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__897__AT5G50230.1	fgenesh2_kg.8__897__AT5G50230.1	fgenesh2_kg.8__897__AT5G50230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-28	95.8	307	344
UBD/Beta-Prp	1.40e-50	172.9	223	435

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gHtd+v++++    s++++vs+++D tik+WDl++g +
   Q: 307  GHTDKVCAVDVskfSSRHVVSAAYDRTIKLWDLHKGYC 344
           8*******98888766*****************99876 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgk 85
           +h++ + ++ f  ++  l+tg++d+ +k wd+ +g l++sl+g  + + ++   +d k  + + + +++ vwd+s+g 
   Q: 223  AHEGGCGSIIFEYNSGTLFTGGQDRAVKMWDTNSGALIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGR 300
           677778889998899999****************************************999999999*********** PP
   S: 86   cvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvr 162
             htl+gh+d+v+++++s+ s+ ++vs+  drti++wdl++g+c +++l   +    c+++++    ++sG+ D+ +r
   Q: 301  VRHTLTGHTDKVCAVDVSKfSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDG--LTVFSGHMDGNLR 376
           *******************999************************99999997777777777..99*********** PP
   S: 163  lWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght 222
           lWd++tgkll +  g h ++v+s+s+++ng+++++ ++d+  +++d +t e+  tl++  
   Q: 377  LWDIQTGKLLSEVAG-HSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASG 435
           *************99.********************************999999998865 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MLQEEKAMEA IKDALRALRK RHLLEEGAHA PAISALSRPI ISQGSEWKEK TEKLETELQQ 60
CYKAQSRLSE QLVIEVAESR TSKAILQEKE LFINDLQKEL TQRREECTQI QEELEEKTKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGACTCCTTT TGATCTGATC GAGAGATGTA AGTTTTGATT TGATCTCCTT TCTTGTTCAA 60
TAAGCTTTTT ACGATTGTTG AAATATCGAT TCCGATGATC GTCGGAACTT TCTTCAGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_495081

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000090	Aegilops tauschii	51.01	3.00e-141	494.00
IUUC-Aml-002242	Ailuropoda melanoleuca	26.50	7.00e-41	161.00
IUUC-Atr-003073	Amborella trichopoda	61.02	4.00e-154	537.00
IUUC-Apl-003384	Anas platyrhynchos	34.44	7.00e-46	177.00
IUUC-Aca-004962	Anolis carolinensis	34.00	1.00e-44	173.00
IUUC-Ath-006948	Arabidopsis thaliana	96.86	0.00e+00	1000.00
IUUC-Ame-010915	Astyanax mexicanus	35.29	3.00e-40	158.00
IUUC-Bta-012388	Bos taurus	32.67	3.00e-45	176.00
IUUC-Bdi-014231	Brachypodium distachyon	52.23	7.00e-148	516.00
IUUC-Bol-016174	Brassica oleracea	91.55	0.00e+00	923.00
IUUC-Bra-017165	Brassica rapa	90.53	0.00e+00	927.00
IUUC-Cel-018131	Caenorhabditis elegans	25.60	2.00e-32	133.00
IUUC-Cja-020002	Callithrix jacchus	30.79	3.00e-35	142.00
IUUC-Cfa-020484	Canis familiaris	27.41	7.00e-47	181.00
IUUC-Cpo-022156	Cavia porcellus	27.68	4.00e-46	178.00
IUUC-Csa-024019	Chlorocebus sabaeus	28.77	5.00e-51	194.00
IUUC-Cho-024311	Choloepus hoffmanni	35.58	7.00e-34	137.00
IUUC-Cin-025260	Ciona intestinalis	24.17	2.00e-36	146.00
IUUC-Dre-027702	Danio rerio	36.00	8.00e-47	181.00
IUUC-Dno-029728	Dasypus novemcinctus	34.32	9.00e-46	177.00
IUUC-Dor-030897	Dipodomys ordii	30.69	1.00e-39	157.00
IUUC-Dme-031595	Drosophila melanogaster	30.82	3.00e-35	142.00
IUUC-Ete-032969	Echinops telfairi	34.14	1.00e-43	170.00
IUUC-Eca-034214	Equus caballus	34.80	5.00e-43	168.00
IUUC-Eeu-034537	Erinaceus europaeus	31.58	4.00e-37	148.00
IUUC-Fca-036005	Felis catus	34.32	3.00e-45	176.00
IUUC-Fal-037593	Ficedula albicollis	34.32	5.00e-46	178.00
IUUC-Gmo-038880	Gadus morhua	32.45	2.00e-30	126.00
IUUC-Gga-040986	Gallus gallus	34.98	3.00e-47	182.00
IUUC-Gac-041351	Gasterosteus aculeatus	35.86	1.00e-48	187.00
IUUC-Gma-043452	Glycine max	74.16	0.00e+00	813.00
IUUC-Ggo-045427	Gorilla gorilla	34.77	1.00e-45	177.00
IUUC-Hsa-046632	Homo sapiens	27.94	3.00e-46	179.00
IUUC-Hvu-047655	Hordeum vulgare	52.84	2.00e-118	418.00
IUUC-Itr-048504	Ictidomys tridecemlineatus	29.04	3.00e-51	196.00
IUUC-Lpe-051254	Leersia perrieri	53.22	4.00e-147	513.00
IUUC-Loc-052610	Lepisosteus oculatus	35.86	1.00e-48	186.00
IUUC-Laf-053936	Loxodonta africana	33.33	1.00e-44	174.00
IUUC-Mcc-055504	Macaca mulatta	34.44	1.00e-45	177.00
IUUC-Meu-056516	Macropus eugenii	33.00	2.00e-45	176.00
IUUC-Mtr-058062	Medicago truncatula	71.01	0.00e+00	759.00
IUUC-Mla-059081	Melampsora laricipopulina	31.82	6.00e-28	118.00
IUUC-Mga-059777	Meleagris gallopavo	34.54	1.00e-44	173.00
IUUC-Mmr-061298	Microcebus murinus	35.10	2.00e-46	179.00
IUUC-Mdo-062969	Monodelphis domestica	33.66	8.00e-46	177.00
IUUC-Mmu-064076	Mus musculus	34.45	1.00e-46	180.00
IUUC-Mac-065161	Musa acuminata	63.01	1.00e-177	615.00
IUUC-Mpu-066196	Mustela putorius furo	33.99	2.00e-45	176.00
IUUC-Mlu-067651	Myotis lucifugus	27.50	1.00e-46	180.00
IUUC-Nle-069853	Nomascus leucogenys	26.98	2.00e-43	170.00
IUUC-Opr-071039	Ochotona princeps	31.02	7.00e-40	157.00
IUUC-Ont-072489	Oreochromis niloticus	35.31	4.00e-48	185.00
IUUC-Oan-072703	Ornithorhynchus anatinus	34.10	4.00e-46	178.00
IUUC-Ocu-074205	Oryctolagus cuniculus	34.44	3.00e-45	176.00
IUUC-Oba-075619	Oryza barthii	53.80	1.00e-153	535.00
IUUC-Obr-076632	Oryza brachyantha	53.05	2.00e-143	501.00
IUUC-Ogl-077671	Oryza glaberrima	53.80	2.00e-153	535.00
IUUC-Ogu-078052	Oryza glumaepatula	54.00	6.00e-154	536.00
IUUC-Oin-079611	Oryza indica	54.00	3.00e-152	531.00
IUUC-Olo-080408	Oryza longistaminata	54.19	1.00e-141	496.00
IUUC-Ome-081560	Oryza meridionalis	54.00	5.00e-154	536.00
IUUC-Oni-082145	Oryza nivara	53.80	1.00e-153	535.00
IUUC-Opu-083918	Oryza punctata	53.80	5.00e-141	494.00
IUUC-Oru-084858	Oryza rufipogon	54.00	9.00e-152	529.00
IUUC-Osa-086277	Oryza sativa	54.00	2.00e-152	531.00
IUUC-Ola-086964	Oryzias latipes	35.49	6.00e-42	163.00
IUUC-Olu-087622	Ostreococcus lucimarinus	33.60	6.00e-66	243.00
IUUC-Oga-088765	Otolemur garnettii	28.80	3.00e-52	198.00
IUUC-Oar-090196	Ovis aries	33.22	1.00e-42	166.00
IUUC-Ptr-091676	Pan troglodytes	27.94	3.00e-46	179.00
IUUC-Pan-092068	Papio anubis	34.44	1.00e-45	177.00
IUUC-Psi-093367	Pelodiscus sinensis	34.98	6.00e-49	187.00
IUUC-Ppa-095699	Physcomitrella patens	49.71	5.00e-141	493.00
IUUC-Pfo-096067	Poecilia formosa	28.27	9.00e-49	187.00
IUUC-Pab-098111	Pongo abelii	34.77	2.00e-45	176.00
IUUC-Pop-099116	Populus trichocarpa	74.46	0.00e+00	810.00
IUUC-Pca-100680	Procavia capensis	34.25	1.00e-34	140.00
IUUC-Ppe-101790	Prunus persica	73.72	0.00e+00	806.00
IUUC-Pva-102871	Pteropus vampyrus	33.99	1.00e-46	180.00
IUUC-Pgr-103597	Puccinia graminis	30.83	1.00e-27	118.00
IUUC-Rno-106088	Rattus norvegicus	34.45	9.00e-47	181.00
IUUC-Sha-106984	Sarcophilus harrisii	26.20	1.00e-48	187.00
IUUC-Smo-108983	Selaginella moellendorffii	47.36	4.00e-135	473.00
IUUC-Sit-110828	Setaria italica	54.71	1.00e-153	535.00
IUUC-Sly-111009	Solanum lycopersicum	69.81	0.00e+00	722.00
IUUC-Stu-112370	Solanum tuberosum	70.33	0.00e+00	783.00
IUUC-Sar-113109	Sorex araneus	34.93	1.00e-26	113.00
IUUC-Sbi-114819	Sorghum bicolor	53.89	1.00e-150	526.00
IUUC-Ssc-116241	Sus scrofa	35.14	2.00e-42	166.00
IUUC-Tgu-116576	Taeniopygia guttata	34.44	1.00e-45	177.00
IUUC-Tru-118336	Takifugu rubripes	31.91	2.00e-35	143.00
IUUC-Tsy-119006	Tarsius syrichta	34.44	1.00e-45	177.00
IUUC-Tni-120300	Tetraodon nigroviridis	35.20	1.00e-46	180.00
IUUC-Tca-121002	Theobroma cacao	72.50	0.00e+00	785.00
IUUC-Tae-124868	Triticum aestivum	51.41	3.00e-142	498.00
IUUC-Tur-126463	Triticum urartu	50.60	7.00e-141	493.00
IUUC-Tbe-127631	Tupaia belangeri	35.10	6.00e-46	177.00
IUUC-Ttr-129005	Tursiops truncatus	34.14	7.00e-38	151.00
IUUC-Vvi-130878	Vitis vinifera	69.82	0.00e+00	760.00
IUUC-Xtr-132798	Xenopus tropicalis	33.01	1.00e-37	150.00
IUUC-Xma-133264	Xiphophorus maculatus	29.09	3.00e-48	186.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence