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Tag Content
iUUCD ID IUUC-Loc-052610
Ensembl Protein ID ENSLOCP00000011331.1
UniProt Accession W5MSH2; W5MSH2_LEPOC
Genbank Protein ID ENSLOCP00000011331
Protein Name Uncharacterized protein
Genbank Nucleotide ID AHAT01012921
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLOCG00000009283.1 ENSLOCT00000011347.1 ENSLOCP00000011331.1
ENSLOCG00000009283.1 ENSLOCT00000011359.1 ENSLOCP00000011343.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-33 113.2 422 461
UBD/Beta-Prp 9.20e-62 209.0 333 621
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
    gH+++v + +f ++ ++vsGs+D t+k+WDlr+ v++k+
   Q: 422 GHSGKVLSARFllDNARIVSGSYDRTLKLWDLRSKVCIKT 461
    8***********64489********************985 PP
   


   UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk 91
    ++++h++ +++v fsp+++l+atg++d+++k+w+v +g + +l g +a++t+++f++ g++l+ +s+D + ++w +++ htl+
   Q: 333 VFDAHDGEVNAVRFSPGSRLMATGGMDRKVKLWEVISGHCelKGTLTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDQRLRHTLT 421
    6799**********************************998899********************************************* PP
   S: 92 ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgght 180
    gh+ +vls +f ++ ++vsGs drt+++wdl+++ c++++++g + c + +++++++sG+ D++vr Wd++ ++++r+l+ +
   Q: 422 GHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCIKTVFAGSS----CNDIVCTEQCVMSGHFDKKVRYWDIRAESIVRELE--LH 504
    ***************************************9999988....888888889*************************7..69 PP
   S: 181 dsvyslsfdsngkelvsgsldgtvklwdlqtgec.....vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
    ++v+sl+++ +++el+++s+d +k+ dl+t+ + v+ +++ +d+++ v fsp++ +++ gs+Dg++++W++ +g+l +tl +h+
   Q: 505 GRVTSLDLNAERTELLACSRDDLIKIIDLRTNAVrqtfsVQGFKCGSDWTR-VTFSPDGSYIAAGSADGTLYVWNVLTGKLDRTLGKHH 592
    9*****************************999955555666666666666.************************************* PP
   S: 265 ssvisvavlsfgdnvlvlgsedskvniwk 293
    ss i ++s+++ ++v++++ sk+ +w+
   Q: 593 SSTINAVAWSPSGTYVVSVEKGSKAVLWS 621
    **************************996 PP
   

Organism Lepisosteus oculatus
Protein Sequence
(Fasta)
MSGVRFRAEC SWKRHIAEQL KHRDRVQRQA FEEIIQQYNR LLEKADLQAV LAERRQTEKY 60
DIQNRHDLSP GADGGRSETL VQEMSQIRIK HQEELTELHK KRGELAQNVI ELNNQMQQKD 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Loc-052610|E3,WD_repeat;UBD,Beta-Prp|Lepisosteus oculatus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTTTTTTTGT ATCACTTTGT AGAATGCTAT AGGTTGTTAA ACCAATCTTT TTCTAGTTGT 60
GTATATTATT GTTTTACGTG TTGGGGGGGG GAGCCACACT TTACTAACGC GCTCAATTAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Loc-052610|E3,WD_repeat;UBD,Beta-Prp|Lepisosteus oculatus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000090 Aegilops tauschii 28.62 3.00e-32 133.00
IUUC-Aml-002242 Ailuropoda melanoleuca 70.95 0.00e+00 841.00
IUUC-Atr-003073 Amborella trichopoda 30.23 8.00e-29 121.00
IUUC-Apl-003384 Anas platyrhynchos 76.60 0.00e+00 947.00
IUUC-Aca-004962 Anolis carolinensis 75.40 0.00e+00 934.00
IUUC-Aly-005435 Arabidopsis lyrata 35.86 3.00e-48 186.00
IUUC-Ath-006948 Arabidopsis thaliana 35.20 2.00e-47 183.00
IUUC-Ame-010915 Astyanax mexicanus 86.24 2.00e-168 584.00
IUUC-Bta-012388 Bos taurus 76.49 0.00e+00 969.00
IUUC-Bdi-014231 Brachypodium distachyon 30.51 8.00e-36 144.00
IUUC-Bol-016174 Brassica oleracea 36.18 9.00e-50 191.00
IUUC-Bra-017165 Brassica rapa 36.18 2.00e-49 189.00
IUUC-Cel-018131 Caenorhabditis elegans 38.21 4.00e-58 219.00
IUUC-Cja-018898 Callithrix jacchus 65.18 0.00e+00 758.00
IUUC-Cfa-020484 Canis familiaris 74.24 0.00e+00 918.00
IUUC-Cpo-022156 Cavia porcellus 74.76 0.00e+00 914.00
IUUC-Csa-024019 Chlorocebus sabaeus 71.77 0.00e+00 880.00
IUUC-Cho-024311 Choloepus hoffmanni 63.61 0.00e+00 769.00
IUUC-Cin-025260 Ciona intestinalis 36.09 2.00e-97 349.00
IUUC-Csv-025836 Ciona savignyi 44.71 5.00e-48 183.00
IUUC-Dre-027702 Danio rerio 82.52 0.00e+00 1008.00
IUUC-Dno-029728 Dasypus novemcinctus 75.40 0.00e+00 964.00
IUUC-Dme-031595 Drosophila melanogaster 39.75 1.00e-114 406.00
IUUC-Ete-032969 Echinops telfairi 64.09 0.00e+00 659.00
IUUC-Eca-034214 Equus caballus 77.01 0.00e+00 794.00
IUUC-Eeu-034537 Erinaceus europaeus 73.10 0.00e+00 762.00
IUUC-Fca-036005 Felis catus 73.95 0.00e+00 904.00
IUUC-Fal-037593 Ficedula albicollis 79.04 0.00e+00 933.00
IUUC-Gmo-039042 Gadus morhua 68.57 0.00e+00 769.00
IUUC-Gga-040986 Gallus gallus 78.14 0.00e+00 1002.00
IUUC-Gac-041351 Gasterosteus aculeatus 80.58 0.00e+00 1035.00
IUUC-Gma-043452 Glycine max 30.50 2.00e-49 190.00
IUUC-Ggo-045427 Gorilla gorilla 75.04 0.00e+00 924.00
IUUC-Hsa-046632 Homo sapiens 73.55 0.00e+00 908.00
IUUC-Itr-048504 Ictidomys tridecemlineatus 70.90 0.00e+00 868.00
IUUC-Lch-049439 Latimeria chalumnae 48.81 6.00e-153 534.00
IUUC-Lpe-051254 Leersia perrieri 31.58 2.00e-38 153.00
IUUC-Laf-053936 Loxodonta africana 75.40 0.00e+00 938.00
IUUC-Mcc-055504 Macaca mulatta 72.60 0.00e+00 934.00
IUUC-Meu-056516 Macropus eugenii 72.19 0.00e+00 880.00
IUUC-Mtr-057981 Medicago truncatula 33.33 6.00e-45 175.00
IUUC-Mga-059777 Meleagris gallopavo 74.59 0.00e+00 941.00
IUUC-Mmr-061298 Microcebus murinus 76.77 0.00e+00 938.00
IUUC-Mdo-062969 Monodelphis domestica 76.37 0.00e+00 952.00
IUUC-Mmu-064076 Mus musculus 74.84 0.00e+00 918.00
IUUC-Mac-065022 Musa acuminata 33.66 9.00e-45 174.00
IUUC-Mpu-066196 Mustela putorius furo 76.33 0.00e+00 936.00
IUUC-Mlu-067651 Myotis lucifugus 73.63 0.00e+00 907.00
IUUC-Nle-069853 Nomascus leucogenys 72.26 0.00e+00 887.00
IUUC-Opr-070350 Ochotona princeps 82.84 2.00e-106 379.00
IUUC-Ont-072489 Oreochromis niloticus 81.55 0.00e+00 1009.00
IUUC-Oan-072703 Ornithorhynchus anatinus 72.79 0.00e+00 873.00
IUUC-Ocu-074205 Oryctolagus cuniculus 75.68 0.00e+00 942.00
IUUC-Oba-075619 Oryza barthii 31.47 4.00e-37 149.00
IUUC-Obr-076632 Oryza brachyantha 30.77 3.00e-39 156.00
IUUC-Ogl-077671 Oryza glaberrima 31.47 4.00e-37 149.00
IUUC-Ogu-078052 Oryza glumaepatula 31.47 4.00e-37 149.00
IUUC-Oin-079611 Oryza indica 31.12 3.00e-35 143.00
IUUC-Olo-080408 Oryza longistaminata 31.47 6.00e-37 148.00
IUUC-Ome-081560 Oryza meridionalis 31.47 4.00e-37 149.00
IUUC-Oni-082145 Oryza nivara 31.47 4.00e-37 149.00
IUUC-Opu-083918 Oryza punctata 31.12 2.00e-36 147.00
IUUC-Oru-084858 Oryza rufipogon 31.12 5.00e-35 142.00
IUUC-Osa-086277 Oryza sativa 31.12 3.00e-35 143.00
IUUC-Ola-086816 Oryzias latipes 75.90 3.00e-121 427.00
IUUC-Olu-087622 Ostreococcus lucimarinus 34.11 8.00e-46 177.00
IUUC-Oga-088765 Otolemur garnettii 81.94 3.00e-160 558.00
IUUC-Oar-090196 Ovis aries 75.80 0.00e+00 867.00
IUUC-Ptr-091676 Pan troglodytes 73.71 0.00e+00 910.00
IUUC-Pan-092068 Papio anubis 75.52 0.00e+00 929.00
IUUC-Psi-093367 Pelodiscus sinensis 76.37 0.00e+00 927.00
IUUC-Ppa-095699 Physcomitrella patens 34.65 4.00e-43 169.00
IUUC-Pfo-096067 Poecilia formosa 78.93 0.00e+00 988.00
IUUC-Pab-098111 Pongo abelii 75.04 0.00e+00 923.00
IUUC-Pop-099116 Populus trichocarpa 33.22 4.00e-46 179.00
IUUC-Pca-100680 Procavia capensis 68.07 0.00e+00 792.00
IUUC-Ppe-101790 Prunus persica 32.34 2.00e-46 179.00
IUUC-Pva-102871 Pteropus vampyrus 75.26 0.00e+00 888.00
IUUC-Rno-106088 Rattus norvegicus 74.35 0.00e+00 914.00
IUUC-Sha-106984 Sarcophilus harrisii 74.70 0.00e+00 918.00
IUUC-Smo-109404 Selaginella moellendorffii 30.77 3.00e-41 162.00
IUUC-Sit-110828 Setaria italica 32.67 4.00e-40 159.00
IUUC-Sly-111009 Solanum lycopersicum 25.94 2.00e-48 186.00
IUUC-Stu-112370 Solanum tuberosum 32.57 1.00e-48 187.00
IUUC-Sar-113659 Sorex araneus 48.88 3.00e-65 241.00
IUUC-Sbi-114819 Sorghum bicolor 31.99 2.00e-39 157.00
IUUC-Ssc-116241 Sus scrofa 73.38 0.00e+00 887.00
IUUC-Tgu-116576 Taeniopygia guttata 76.21 0.00e+00 960.00
IUUC-Tru-118336 Takifugu rubripes 72.03 0.00e+00 865.00
IUUC-Tsy-119006 Tarsius syrichta 73.34 0.00e+00 885.00
IUUC-Tni-120300 Tetraodon nigroviridis 79.45 0.00e+00 978.00
IUUC-Tca-121002 Theobroma cacao 26.50 8.00e-52 197.00
IUUC-Tae-124868 Triticum aestivum 29.31 3.00e-33 136.00
IUUC-Tur-126463 Triticum urartu 28.62 1.00e-32 134.00
IUUC-Tbe-127631 Tupaia belangeri 76.42 0.00e+00 759.00
IUUC-Ttr-129005 Tursiops truncatus 71.43 3.00e-139 488.00
IUUC-Vpa-130246 Vicugna pacos 68.74 0.00e+00 683.00
IUUC-Vvi-130878 Vitis vinifera 33.99 2.00e-46 180.00
IUUC-Xtr-132798 Xenopus tropicalis 68.64 0.00e+00 826.00
IUUC-Xma-133264 Xiphophorus maculatus 79.58 0.00e+00 981.00
Created Date 25-Jun-2017

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