iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000102294.1	ENSDART00000169473.1	ENSDARP00000134594.1
ENSDARG00000102294.1	ENSDART00000159688.1	ENSDARP00000134626.1
ENSDARG00000102294.1	ENSDART00000171765.1	ENSDARP00000140781.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	2.80e-06	28.4	101	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 93   tpeegpdaglldrlpeeilveilklldkeellraarvcrrwqelasqkalwktvt 147
           t    +++ l+ +lp+e++++i+++l +++l+raa+vc+r++ela+++ lwk+++
   Q: 101  T---PAEQYLQVKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLY 152
           3...345678899**************************************9876 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MNSVRATNRR PRRVSRPRPV PPDRNNAERD EEVPAEMVAE ESGQGAQNSP YQLRRKSLLP 60
KRTACPTKTN MEGASTSTTE NFGHRAKRAR VSGKSQDLPV TPAEQYLQVK LPDEVVLKIF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGTGTGTG TGAGTGTGTA TGTGAGTAAA TGGCTCCTCC TGCCACTGGA AATCGAAATC 60
GGAGCTCTCG GACTAGAGCG CCCGGACATT AAACCGCTTT CTCGGAGTCC AGACCAAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR006633--Carb-bd_sugar_hydrolysis-dom
IPR001810--F-box_dom
IPR029799--FBX11/DRE-1
IPR022441--Para_beta_helix_rpt-2
IPR006626--PbH1
IPR012334--Pectin_lyas_fold
IPR011050--Pectin_lyase_fold/virulence
IPR003126--Znf_UBR

PROSITE

PS50181--FBOX
PS51157--ZF_UBR

Pfam

PF12937--F-box-like
PF02207--zf-UBR

SMART

SM00722--CASH
SM00256--FBOX
SM00710--PbH1
SM00396--ZnF_UBR1

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ate-010540	Aspergillus terreus	24.81	4.00e-06	46.20
IUUC-Ame-010687	Astyanax mexicanus	99.05	0.00e+00	1732.00
IUUC-Bci-013908	Botrytis cinerea	46.15	2.00e-04	41.20
IUUC-Cpo-022148	Cavia porcellus	97.88	0.00e+00	1741.00
IUUC-Cho-024925	Choloepus hoffmanni	90.34	0.00e+00	1554.00
IUUC-Cin-025649	Ciona intestinalis	68.65	0.00e+00	1236.00
IUUC-Csv-026010	Ciona savignyi	73.97	0.00e+00	1199.00
IUUC-Cgl-026674	Colletotrichum gloeosporioides	35.37	1.00e-06	48.50
IUUC-Cne-027052	Cryptococcus neoformans	35.59	4.00e-06	47.00
IUUC-Dor-030610	Dipodomys ordii	85.66	0.00e+00	1489.00
IUUC-Dme-031852	Drosophila melanogaster	69.21	0.00e+00	1120.00
IUUC-Ete-032999	Echinops telfairi	93.48	0.00e+00	1622.00
IUUC-Gmo-039082	Gadus morhua	96.24	0.00e+00	1720.00
IUUC-Ggr-039812	Gaeumannomyces graminis	27.17	1.00e-06	48.50
IUUC-Gac-042106	Gasterosteus aculeatus	97.53	0.00e+00	1730.00
IUUC-Meu-056886	Macropus eugenii	98.27	0.00e+00	1073.00
IUUC-Ola-087393	Oryzias latipes	97.06	0.00e+00	1723.00
IUUC-Pan-092606	Papio anubis	99.08	0.00e+00	1341.00
IUUC-Pma-094248	Petromyzon marinus	86.23	0.00e+00	1515.00
IUUC-Pfo-097361	Poecilia formosa	96.84	0.00e+00	1728.00
IUUC-Ssl-108666	Sclerotinia sclerotiorum	43.59	3.00e-04	40.80
IUUC-Sre-115181	Sporisorium reilianum	45.45	1.00e-07	52.40
IUUC-Tbe-127560	Tupaia belangeri	98.87	2.00e-157	549.00
IUUC-Uma-129621	Ustilago maydis	44.23	4.00e-07	50.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence