iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028253

UUCD1 version

UUC-DaR-00476

Ensembl Protein ID

ENSDARP00000130383.1

UniProt Accession

A0A0R4IBT4; A0A0R4IBT4_DANRE

Genbank Protein ID

ENSDARP00000130383

Protein Name

Tripartite motif-containing 24

Genbank Nucleotide ID

CABZ01016325

Gene Name

trim24

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000103350.1	ENSDART00000166994.1	ENSDARP00000130383.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.70e-08	34.8	698	742

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C+vC++gge    l++C+kC ++fH  C+ ++  +  p+ e w+C+ Cr
   Q: 698  DWCAVCQNGGE----LLCCDKCPKVFHLSCHVPT-LTASPSGE-WYCTFCR 742
           79*********....*******************.99999998.******8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MDVGEKMESD DVVIIVENEA ESKRDGNEDE GGGGQGGVRM MMMMAALMDV CPVCKLSFSS 60
REPKLLPCLH SFCKRCLPAH SSPAGTTSTA KQLSMIRCPV CQQECMDVEV LDNFFVKDSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGTCTGG TAACAACACA GTTGTGTTTA ACATGTCTAC ACCTAATTAC TGATAACTGC 60
TATCGAGCGA ATGAGCCGCG GAGCGCGTGT GCTGCTGATA TCTCCTGCGC CGAGCAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003649--Bbox_C
IPR001487--Bromodomain
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50014--BROMODOMAIN_2
PS50119--ZF_BBOX
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00439--Bromodomain
PF00628--PHD
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR00503--BROMODOMAIN

SMART

SM00502--BBC
SM00336--BBOX
SM00297--BROMO
SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006656	Arabidopsis thaliana	50.98	2.00e-12	68.90
IUUC-Ame-011506	Astyanax mexicanus	77.72	0.00e+00	666.00
IUUC-Cel-018225	Caenorhabditis elegans	24.01	6.00e-16	80.10
IUUC-Gac-041865	Gasterosteus aculeatus	55.15	0.00e+00	840.00
IUUC-Loc-052707	Lepisosteus oculatus	46.83	0.00e+00	757.00
IUUC-Ont-071917	Oreochromis niloticus	55.07	0.00e+00	983.00
IUUC-Ola-087300	Oryzias latipes	74.72	1.00e-161	564.00
IUUC-Pfo-096658	Poecilia formosa	55.29	0.00e+00	967.00
IUUC-Tru-118426	Takifugu rubripes	52.35	0.00e+00	852.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence