iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112910

Ensembl Protein ID

PGSC0003DMT400049479

UniProt Accession

A7X6G2; A7X6G2_SOLTU

Genbank Protein ID

ABB16357.1

Protein Name

Fertilization-independent endosperm protein

Genbank Nucleotide ID

DQ198169

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG401019226	PGSC0003DMT400049478	PGSC0003DMT400049478
PGSC0003DMG401019226	PGSC0003DMT400049479	PGSC0003DMT400049479

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-22	78.1	173	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH ++v +++f  +d  +++s++ D+t+k+W++
   Q: 173  GHRNEVLSVDFhpTDiYRIASCGMDNTVKIWSM 205
           8***********888999*************97 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAARVPLGCE PVVGSLTPSR KKEYRVTNRL QEGKRPLYGV VFNFIDSRYF NVFATVGGNR 60
VTVYQCLEGG VIAVLQSYID EDKDESFYTV SWACNIDGSP FLVAGGINGV IRVIDAGKEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATATTTTAG GGACACTGTA AATATGTAGA GTTTTTCGTT CCTCTCTAAG CTCTGGCAGA 60
GTGATAGCAA TGGCGGCGAG AGTACCTCTA GGATGTGAAC CTGTTGTTGG ATCATTAACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005677--C:chromatin silencing complex
GO:0043078--C:polar nucleus
GO:0016571--P:histone methylation
GO:2000014--P:regulation of endosperm development
GO:0006349--P:regulation of gene expression by genetic imprinting
GO:0009409--P:response to cold

KEGG

sot:102577673

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000689	Aegilops tauschii	75.69	1.00e-171	595.00
IUUC-Aml-001510	Ailuropoda melanoleuca	39.89	3.00e-71	261.00
IUUC-Atr-002496	Amborella trichopoda	80.77	9.00e-174	601.00
IUUC-Apl-003768	Anas platyrhynchos	40.39	2.00e-74	271.00
IUUC-Aca-004382	Anolis carolinensis	40.39	1.00e-74	272.00
IUUC-Aly-005980	Arabidopsis lyrata	74.66	2.00e-173	600.00
IUUC-Ath-006579	Arabidopsis thaliana	74.11	7.00e-174	601.00
IUUC-Ame-010987	Astyanax mexicanus	40.34	2.00e-73	268.00
IUUC-Bta-013432	Bos taurus	40.39	5.00e-75	273.00
IUUC-Bci-013970	Botrytis cinerea	28.89	7.00e-22	97.40
IUUC-Bdi-014553	Brachypodium distachyon	76.61	1.00e-175	607.00
IUUC-Bol-016522	Brassica oleracea	74.66	6.00e-173	598.00
IUUC-Bra-017137	Brassica rapa	74.66	2.00e-173	600.00
IUUC-Cel-018494	Caenorhabditis elegans	25.42	5.00e-23	100.00
IUUC-Cja-019066	Callithrix jacchus	40.39	7.00e-75	273.00
IUUC-Cfa-021261	Canis familiaris	40.39	5.00e-75	273.00
IUUC-Cpo-022375	Cavia porcellus	36.49	7.00e-62	229.00
IUUC-Csa-024005	Chlorocebus sabaeus	40.39	5.00e-75	273.00
IUUC-Cho-024881	Choloepus hoffmanni	42.50	3.00e-51	194.00
IUUC-Cin-025697	Ciona intestinalis	39.39	2.00e-75	275.00
IUUC-Csv-026221	Ciona savignyi	39.45	2.00e-76	278.00
IUUC-Cgl-026519	Colletotrichum gloeosporioides	24.84	3.00e-17	82.00
IUUC-Cne-026877	Cryptococcus neoformans	27.76	2.00e-19	89.70
IUUC-Cme-027353	Cyanidioschyzon merolae	39.46	2.00e-26	112.00
IUUC-Dre-028346	Danio rerio	40.11	1.00e-73	269.00
IUUC-Dno-029319	Dasypus novemcinctus	40.11	1.00e-74	272.00
IUUC-Dor-030746	Dipodomys ordii	30.53	2.00e-45	175.00
IUUC-Dse-031324	Dothistroma septosporum	28.85	7.00e-20	90.50
IUUC-Dme-032029	Drosophila melanogaster	40.54	5.00e-74	270.00
IUUC-Ete-032880	Echinops telfairi	38.49	3.00e-40	158.00
IUUC-Eca-034272	Equus caballus	40.39	8.00e-75	272.00
IUUC-Eeu-035303	Erinaceus europaeus	37.24	3.00e-68	251.00
IUUC-Fca-036008	Felis catus	40.39	6.00e-75	273.00
IUUC-Fal-037577	Ficedula albicollis	40.39	3.00e-74	270.00
IUUC-Fso-038294	Fusarium solani	31.86	8.00e-25	107.00
IUUC-Gmo-039008	Gadus morhua	39.53	3.00e-67	248.00
IUUC-Ggr-039894	Gaeumannomyces graminis	27.20	1.00e-17	83.60
IUUC-Gga-040859	Gallus gallus	40.39	3.00e-74	271.00
IUUC-Gac-041667	Gasterosteus aculeatus	40.23	2.00e-66	245.00
IUUC-Gma-042718	Glycine max	87.16	0.00e+00	681.00
IUUC-Ggo-045624	Gorilla gorilla	37.76	8.00e-71	259.00
IUUC-Hsa-046505	Homo sapiens	40.39	5.00e-75	273.00
IUUC-Hvu-047228	Hordeum vulgare	78.53	2.00e-82	296.00
IUUC-Itr-048381	Ictidomys tridecemlineatus	40.39	5.00e-75	273.00
IUUC-Lch-050492	Latimeria chalumnae	40.67	6.00e-75	273.00
IUUC-Lpe-050870	Leersia perrieri	71.82	6.00e-161	558.00
IUUC-Loc-052361	Lepisosteus oculatus	41.00	4.00e-75	274.00
IUUC-Lma-053058	Leptosphaeria maculans	22.88	2.00e-11	62.80
IUUC-Laf-053941	Loxodonta africana	39.89	1.00e-74	272.00
IUUC-Mcc-055518	Macaca mulatta	37.76	8.00e-71	259.00
IUUC-Mor-056944	Magnaporthe oryzae	25.85	7.00e-18	84.30
IUUC-Mtr-058716	Medicago truncatula	79.51	1.00e-177	614.00
IUUC-Mga-059469	Meleagris gallopavo	40.39	2.00e-74	271.00
IUUC-Mmr-061026	Microcebus murinus	37.76	8.00e-71	259.00
IUUC-Mdo-062346	Monodelphis domestica	40.67	4.00e-75	273.00
IUUC-Mmu-063785	Mus musculus	40.39	5.00e-75	273.00
IUUC-Mac-064681	Musa acuminata	82.02	0.00e+00	665.00
IUUC-Mpu-066862	Mustela putorius furo	40.39	5.00e-75	273.00
IUUC-Mlu-067103	Myotis lucifugus	37.64	1.00e-69	255.00
IUUC-Ncr-068782	Neurospora crassa	31.05	7.00e-22	97.80
IUUC-Nle-069472	Nomascus leucogenys	40.39	5.00e-75	273.00
IUUC-Opr-070376	Ochotona princeps	35.96	4.00e-40	157.00
IUUC-Ont-071513	Oreochromis niloticus	40.22	1.00e-74	272.00
IUUC-Oan-073202	Ornithorhynchus anatinus	40.39	8.00e-75	272.00
IUUC-Ocu-074012	Oryctolagus cuniculus	40.39	5.00e-75	273.00
IUUC-Oba-075030	Oryza barthii	77.07	3.00e-176	609.00
IUUC-Obr-076895	Oryza brachyantha	75.27	5.00e-174	602.00
IUUC-Ogl-077522	Oryza glaberrima	78.01	1.00e-167	581.00
IUUC-Ogu-078120	Oryza glumaepatula	72.10	1.00e-160	558.00
IUUC-Oin-079886	Oryza indica	77.35	2.00e-176	610.00
IUUC-Olo-080238	Oryza longistaminata	77.49	3.00e-172	596.00
IUUC-Ome-081823	Oryza meridionalis	72.10	3.00e-161	560.00
IUUC-Oni-082388	Oryza nivara	66.30	7.00e-146	509.00
IUUC-Opu-083537	Oryza punctata	75.82	5.00e-175	605.00
IUUC-Oru-084863	Oryza rufipogon	67.39	6.00e-151	526.00
IUUC-Osa-085622	Oryza sativa	77.07	8.00e-176	608.00
IUUC-Ola-087426	Oryzias latipes	38.40	6.00e-66	245.00
IUUC-Olu-087788	Ostreococcus lucimarinus	32.90	9.00e-54	202.00
IUUC-Oga-088228	Otolemur garnettii	40.39	5.00e-75	273.00
IUUC-Oar-090139	Ovis aries	40.39	1.00e-74	272.00
IUUC-Pan-092874	Papio anubis	38.85	9.00e-54	202.00
IUUC-Psi-093927	Pelodiscus sinensis	40.39	7.00e-75	273.00
IUUC-Pma-094740	Petromyzon marinus	42.40	2.00e-46	178.00
IUUC-Ppa-095871	Physcomitrella patens	70.38	3.00e-161	560.00
IUUC-Pfo-097208	Poecilia formosa	40.50	3.00e-74	271.00
IUUC-Pab-097658	Pongo abelii	40.39	5.00e-75	273.00
IUUC-Pop-098930	Populus trichocarpa	86.22	0.00e+00	691.00
IUUC-Ppe-101807	Prunus persica	87.06	0.00e+00	691.00
IUUC-Pva-103191	Pteropus vampyrus	33.85	1.00e-56	212.00
IUUC-Pgr-103619	Puccinia graminis	28.12	1.00e-18	86.30
IUUC-Pte-104406	Pyrenophora teres	23.78	3.00e-20	92.00
IUUC-Pyt-104821	Pyrenophora triticirepentis	21.34	4.00e-13	68.20
IUUC-Rno-105854	Rattus norvegicus	40.39	5.00e-75	273.00
IUUC-Sha-107426	Sarcophilus harrisii	40.67	4.00e-75	273.00
IUUC-Smo-109638	Selaginella moellendorffii	69.74	1.00e-159	554.00
IUUC-Sit-110481	Setaria italica	76.86	3.00e-172	596.00
IUUC-Sly-111464	Solanum lycopersicum	99.46	0.00e+00	768.00
IUUC-Sar-113754	Sorex araneus	36.49	3.00e-64	237.00
IUUC-Sbi-114023	Sorghum bicolor	76.86	1.00e-172	597.00
IUUC-Ssc-115386	Sus scrofa	40.39	5.00e-75	273.00
IUUC-Tgu-117123	Taeniopygia guttata	40.39	2.00e-74	271.00
IUUC-Tru-117720	Takifugu rubripes	38.34	8.00e-71	259.00
IUUC-Tsy-119584	Tarsius syrichta	37.76	8.00e-71	259.00
IUUC-Tni-119695	Tetraodon nigroviridis	40.22	5.00e-75	273.00
IUUC-Tca-121787	Theobroma cacao	87.77	0.00e+00	699.00
IUUC-Tvi-122409	Trichoderma virens	23.96	1.00e-17	83.60
IUUC-Tae-124454	Triticum aestivum	75.69	1.00e-171	595.00
IUUC-Tme-126906	Tuber melanosporum	29.36	1.00e-30	126.00
IUUC-Tbe-127557	Tupaia belangeri	37.54	3.00e-67	248.00
IUUC-Vda-129774	Verticillium dahliae	23.33	3.00e-17	82.00
IUUC-Vpa-130256	Vicugna pacos	34.64	5.00e-58	217.00
IUUC-Vvi-131201	Vitis vinifera	87.77	0.00e+00	697.00
IUUC-Xtr-132206	Xenopus tropicalis	40.67	5.00e-75	273.00
IUUC-Xma-134102	Xiphophorus maculatus	40.50	2.00e-74	271.00
IUUC-Zma-135593	Zea mays	76.86	7.00e-173	598.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence