iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074405

Ensembl Protein ID

ENSOCUP00000012265.3

UniProt Accession

G1T721; G1T721_RABIT

Genbank Protein ID

ENSOCUP00000012265

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02020063

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000014261.3	ENSOCUT00000014268.3	ENSOCUP00000012265.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.30e-08	32.8	288	325

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 288  DEKALKHITEMGFSKEASRQALMDNSNNLEAALNVLLN 325
           78999*******************************97 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MAEVPGAALS QAGWYLSDEG IAACTSSPDK VNVNDIILIA LNTDLRTIGK KFLPSDINGG 60
KIEKLEGPCV LQIQKIRNVA APKDNEESQA APRMLRLQMT DGHISCTAVE FSYMSKISLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGAGG TCCCCGGCGC GGCGTTGTCC CAGGCGGGAT GGTAAGTGGT GAGTCCCGCC 60
GGCCGCCGGG CCGCGGGCGC GGGCCGGGGC CCCAAGGAGG GTTGGGGTTC GGGCGCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

KEGG

ocu:100358354

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	32.31	8.00e-16	77.80
IUUC-Aml-001751	Ailuropoda melanoleuca	91.94	0.00e+00	1308.00
IUUC-Atr-002788	Amborella trichopoda	30.16	3.00e-21	96.30
IUUC-Apl-004055	Anas platyrhynchos	76.10	0.00e+00	947.00
IUUC-Aca-004367	Anolis carolinensis	71.68	0.00e+00	1023.00
IUUC-Aly-006072	Arabidopsis lyrata	36.31	1.00e-22	100.00
IUUC-Ath-007491	Arabidopsis thaliana	35.67	4.00e-22	99.40
IUUC-Ame-011439	Astyanax mexicanus	49.24	1.00e-162	566.00
IUUC-Bta-012894	Bos taurus	88.44	0.00e+00	1290.00
IUUC-Bdi-014462	Brachypodium distachyon	30.43	5.00e-21	95.10
IUUC-Bol-015343	Brassica oleracea	37.50	5.00e-23	102.00
IUUC-Bra-016787	Brassica rapa	37.11	1.00e-22	100.00
IUUC-Cel-018154	Caenorhabditis elegans	33.06	9.00e-28	118.00
IUUC-Cja-019364	Callithrix jacchus	92.32	0.00e+00	1162.00
IUUC-Cfa-021166	Canis familiaris	90.72	0.00e+00	1269.00
IUUC-Cpo-021678	Cavia porcellus	82.06	0.00e+00	958.00
IUUC-Csa-023299	Chlorocebus sabaeus	92.34	0.00e+00	1380.00
IUUC-Cho-024694	Choloepus hoffmanni	93.73	5.00e-138	484.00
IUUC-Cin-025191	Ciona intestinalis	41.38	1.00e-43	169.00
IUUC-Csv-026348	Ciona savignyi	52.94	1.00e-12	64.30
IUUC-Dre-028715	Danio rerio	48.88	1.00e-170	593.00
IUUC-Dno-030091	Dasypus novemcinctus	88.17	0.00e+00	1300.00
IUUC-Dor-030807	Dipodomys ordii	79.88	0.00e+00	979.00
IUUC-Dme-031770	Drosophila melanogaster	32.72	3.00e-43	170.00
IUUC-Ete-032507	Echinops telfairi	68.48	0.00e+00	697.00
IUUC-Eca-033406	Equus caballus	90.41	0.00e+00	1031.00
IUUC-Eeu-034600	Erinaceus europaeus	80.95	0.00e+00	962.00
IUUC-Fca-035916	Felis catus	92.05	0.00e+00	1308.00
IUUC-Fal-036658	Ficedula albicollis	74.63	0.00e+00	1003.00
IUUC-Gmo-038974	Gadus morhua	56.10	4.00e-104	372.00
IUUC-Gga-040195	Gallus gallus	75.74	0.00e+00	1077.00
IUUC-Gac-042537	Gasterosteus aculeatus	47.32	4.00e-166	578.00
IUUC-Gma-044234	Glycine max	35.05	7.00e-24	104.00
IUUC-Ggo-044715	Gorilla gorilla	91.42	0.00e+00	1192.00
IUUC-Hsa-045814	Homo sapiens	93.01	0.00e+00	1385.00
IUUC-Hvu-047365	Hordeum vulgare	30.00	2.00e-16	80.10
IUUC-Itr-047866	Ictidomys tridecemlineatus	91.37	0.00e+00	1311.00
IUUC-Kpa-049313	Komagataella pastoris	33.33	1.30e-01	31.60
IUUC-Lch-050393	Latimeria chalumnae	62.28	0.00e+00	817.00
IUUC-Lpe-050691	Leersia perrieri	34.18	9.00e-21	94.70
IUUC-Loc-052859	Lepisosteus oculatus	57.96	0.00e+00	719.00
IUUC-Laf-053953	Loxodonta africana	87.75	0.00e+00	850.00
IUUC-Mcc-055846	Macaca mulatta	92.19	0.00e+00	1352.00
IUUC-Meu-056790	Macropus eugenii	69.17	0.00e+00	851.00
IUUC-Mtr-058749	Medicago truncatula	36.98	2.00e-21	96.30
IUUC-Mla-058959	Melampsora laricipopulina	39.71	3.00e-06	46.20
IUUC-Mga-059656	Meleagris gallopavo	74.46	0.00e+00	998.00
IUUC-Mmr-061089	Microcebus murinus	91.14	0.00e+00	1278.00
IUUC-Mdo-063043	Monodelphis domestica	68.29	0.00e+00	731.00
IUUC-Mmu-063654	Mus musculus	84.81	0.00e+00	1192.00
IUUC-Mac-064947	Musa acuminata	35.26	2.00e-19	89.70
IUUC-Mpu-066115	Mustela putorius furo	91.52	0.00e+00	1048.00
IUUC-Mlu-066974	Myotis lucifugus	86.02	0.00e+00	1152.00
IUUC-Nle-069184	Nomascus leucogenys	92.47	0.00e+00	1374.00
IUUC-Opr-070770	Ochotona princeps	84.00	0.00e+00	1064.00
IUUC-Ont-072040	Oreochromis niloticus	48.86	0.00e+00	633.00
IUUC-Oan-073448	Ornithorhynchus anatinus	85.19	2.00e-69	254.00
IUUC-Oba-075977	Oryza barthii	30.05	4.00e-14	72.40
IUUC-Obr-076298	Oryza brachyantha	30.84	2.00e-19	90.10
IUUC-Ogl-077706	Oryza glaberrima	30.52	3.00e-14	72.80
IUUC-Ogu-078381	Oryza glumaepatula	30.41	4.00e-15	75.90
IUUC-Oin-080150	Oryza indica	30.88	9.00e-15	74.70
IUUC-Ome-081153	Oryza meridionalis	28.94	2.00e-14	73.20
IUUC-Oni-083115	Oryza nivara	30.88	3.00e-14	72.80
IUUC-Opu-083860	Oryza punctata	31.66	1.00e-19	90.90
IUUC-Oru-084859	Oryza rufipogon	30.88	2.00e-14	73.60
IUUC-Osa-085567	Oryza sativa	30.88	3.00e-13	69.70
IUUC-Ola-087049	Oryzias latipes	48.23	4.00e-175	608.00
IUUC-Oga-088455	Otolemur garnettii	91.80	0.00e+00	1347.00
IUUC-Oar-090096	Ovis aries	90.96	0.00e+00	1319.00
IUUC-Ptr-090974	Pan troglodytes	92.47	0.00e+00	1211.00
IUUC-Pan-092657	Papio anubis	91.94	0.00e+00	1377.00
IUUC-Psi-093113	Pelodiscus sinensis	75.50	0.00e+00	941.00
IUUC-Ppa-095466	Physcomitrella patens	38.62	6.00e-24	105.00
IUUC-Pfo-096631	Poecilia formosa	48.06	3.00e-169	588.00
IUUC-Pab-098070	Pongo abelii	92.34	0.00e+00	1376.00
IUUC-Pop-099235	Populus trichocarpa	36.00	1.00e-21	97.40
IUUC-Pca-101032	Procavia capensis	82.03	0.00e+00	1047.00
IUUC-Ppe-101793	Prunus persica	32.35	2.00e-22	100.00
IUUC-Pva-102290	Pteropus vampyrus	89.25	0.00e+00	1150.00
IUUC-Rno-105080	Rattus norvegicus	83.56	0.00e+00	988.00
IUUC-Sha-107598	Sarcophilus harrisii	79.16	0.00e+00	1122.00
IUUC-Sit-110735	Setaria italica	30.50	5.00e-19	88.60
IUUC-Sly-111126	Solanum lycopersicum	40.79	1.00e-20	94.00
IUUC-Stu-112780	Solanum tuberosum	35.48	2.00e-24	107.00
IUUC-Sar-113418	Sorex araneus	88.04	0.00e+00	1087.00
IUUC-Sbi-113925	Sorghum bicolor	30.77	7.00e-20	91.70
IUUC-Sre-114917	Sporisorium reilianum	38.55	3.00e-07	49.70
IUUC-Ssc-115712	Sus scrofa	91.81	0.00e+00	1354.00
IUUC-Tgu-117148	Taeniopygia guttata	76.01	0.00e+00	1058.00
IUUC-Tru-117831	Takifugu rubripes	47.56	2.00e-162	565.00
IUUC-Tsy-118917	Tarsius syrichta	89.40	0.00e+00	1096.00
IUUC-Tni-120783	Tetraodon nigroviridis	47.67	5.00e-162	564.00
IUUC-Tca-121430	Theobroma cacao	36.53	6.00e-09	55.50
IUUC-Tae-123752	Triticum aestivum	33.33	7.00e-16	78.20
IUUC-Tur-126238	Triticum urartu	33.33	3.00e-15	75.90
IUUC-Ttr-128615	Tursiops truncatus	85.69	0.00e+00	1073.00
IUUC-Vpa-130531	Vicugna pacos	92.17	0.00e+00	1184.00
IUUC-Vvi-131607	Vitis vinifera	39.07	5.00e-17	82.00
IUUC-Xtr-132787	Xenopus tropicalis	59.20	0.00e+00	759.00
IUUC-Xma-133815	Xiphophorus maculatus	48.30	1.00e-170	593.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence