iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000003456.1	ENSORLT00000004296.1	ENSORLP00000004295.1
ENSORLG00000003456.1	ENSORLT00000004297.1	ENSORLP00000004296.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-21	74.3	733	768
UBD/Beta-Prp	4.80e-43	147.7	521	766

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++ +t l++ +d +++ s s+D  i  WD+  g 
   Q: 733  GHSSYITHLDWsPDnNFIMSNSGDYEILYWDVPNGC 768
           8***********998****************98776 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl.........................................lrslsgheaev 55
           +h++ + c++  +++sll+ g++d++i++wd +                                               +++gh++e 
   Q: 521  AHEGSVFCMCEMRSGSLLTGGGKDRKIILWDHELRAErdievpdqygtiraiaegkgeeflvgtsrnfllrgtfndgfQVEVQGHTDEL 609
           455555557778********************99777999*************************************88889******* PP
   S: 56   tavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvv 144
           + +  +p++++++t+++Dr++++wd  + k   + +   +   + +f+psg ++++G+h     v d et   +  + +  ++  ++++
   Q: 610  WGLASHPSKELFLTCAQDRLVCLWDSTNHKLQWSRS-LPEHGHCADFHPSGAVVAIGTHSGRWFVLDAETTDLVG-IHTDGNEQLSVMR 696
           *************************99999888888.889999*******************************9.99999999***** PP
   S: 145  vhpdgnllvsGslDrtvrlWdl..ktgkllrtl..tgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
           ++ dg +l+ Gs D+++ l+++  +  k  r l  +g h +++++l+++++ ++++s s d  + +wd+ +
   Q: 697  YSVDGTMLAVGSHDNFIYLYNVleRGHKYSRYLkcSG-HSSYITHLDWSPDNNFIMSNSGDYEILYWDVPN 766
           ***99****************9854445555558676.******************************865 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MDGFTGSLDD SMSAASVSDV NDRLSALELR VQQQEDELMV MKAALADVLR RLAASEDSAT 60
AATMKQQRGK GGGPLREAYS LSCITNGGTP GRKRDSASVT RKDTVSSAAK SGSDRKKELS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGAGCGGC GTTCTCTTCA GCTCGCTGCG TTGCGGCGGA TTTGAGGTTT AACACGGGCG 60
ACTACGGCGG CAGGAACAGA CCAAACTCTG CTCGGTTCAG TTGGTTTCTT CCCTCTGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001465	Ailuropoda melanoleuca	72.04	0.00e+00	1357.00
IUUC-Apl-003728	Anas platyrhynchos	78.95	0.00e+00	1184.00
IUUC-Aca-004921	Anolis carolinensis	66.15	0.00e+00	1176.00
IUUC-Ame-011846	Astyanax mexicanus	73.37	0.00e+00	1412.00
IUUC-Bta-013457	Bos taurus	67.60	0.00e+00	1322.00
IUUC-Cja-019963	Callithrix jacchus	70.91	0.00e+00	1338.00
IUUC-Cfa-020344	Canis familiaris	72.66	0.00e+00	1363.00
IUUC-Cpo-022426	Cavia porcellus	74.77	0.00e+00	1342.00
IUUC-Csa-023822	Chlorocebus sabaeus	71.38	0.00e+00	1338.00
IUUC-Cho-024398	Choloepus hoffmanni	69.27	3.00e-166	578.00
IUUC-Dno-029822	Dasypus novemcinctus	72.41	0.00e+00	1322.00
IUUC-Ete-032548	Echinops telfairi	72.29	0.00e+00	1031.00
IUUC-Eca-033255	Equus caballus	69.47	0.00e+00	1370.00
IUUC-Fca-035637	Felis catus	68.36	0.00e+00	1363.00
IUUC-Fal-037030	Ficedula albicollis	72.16	0.00e+00	1345.00
IUUC-Gmo-038662	Gadus morhua	84.94	0.00e+00	1301.00
IUUC-Gga-041202	Gallus gallus	72.19	0.00e+00	1360.00
IUUC-Gac-041394	Gasterosteus aculeatus	85.47	0.00e+00	1526.00
IUUC-Ggo-044734	Gorilla gorilla	71.13	0.00e+00	1320.00
IUUC-Hsa-046616	Homo sapiens	72.37	0.00e+00	1357.00
IUUC-Lch-050585	Latimeria chalumnae	70.90	0.00e+00	1311.00
IUUC-Loc-052753	Lepisosteus oculatus	76.16	0.00e+00	1370.00
IUUC-Laf-054189	Loxodonta africana	66.63	0.00e+00	1301.00
IUUC-Mcc-055697	Macaca mulatta	72.48	0.00e+00	1358.00
IUUC-Mmr-060888	Microcebus murinus	72.64	0.00e+00	1313.00
IUUC-Mdo-062025	Monodelphis domestica	77.96	0.00e+00	1221.00
IUUC-Mmu-063591	Mus musculus	69.30	0.00e+00	1371.00
IUUC-Mpu-065718	Mustela putorius furo	73.23	0.00e+00	1370.00
IUUC-Mlu-068068	Myotis lucifugus	67.96	0.00e+00	1332.00
IUUC-Nle-069281	Nomascus leucogenys	70.93	0.00e+00	1277.00
IUUC-Opr-070938	Ochotona princeps	59.78	0.00e+00	850.00
IUUC-Ont-071488	Oreochromis niloticus	82.35	0.00e+00	1565.00
IUUC-Oan-073561	Ornithorhynchus anatinus	66.62	0.00e+00	921.00
IUUC-Ocu-074399	Oryctolagus cuniculus	72.97	0.00e+00	1385.00
IUUC-Oga-088783	Otolemur garnettii	75.25	0.00e+00	1387.00
IUUC-Oar-089716	Ovis aries	71.65	0.00e+00	1320.00
IUUC-Ptr-090942	Pan troglodytes	70.36	0.00e+00	1318.00
IUUC-Pan-091831	Papio anubis	72.59	0.00e+00	1360.00
IUUC-Psi-093094	Pelodiscus sinensis	73.40	0.00e+00	1370.00
IUUC-Pfo-097066	Poecilia formosa	75.38	0.00e+00	1439.00
IUUC-Pab-098351	Pongo abelii	71.24	0.00e+00	1322.00
IUUC-Pva-102783	Pteropus vampyrus	73.08	0.00e+00	976.00
IUUC-Rno-105412	Rattus norvegicus	75.00	0.00e+00	1283.00
IUUC-Sha-106597	Sarcophilus harrisii	73.08	0.00e+00	1341.00
IUUC-Sar-113748	Sorex araneus	60.82	0.00e+00	1056.00
IUUC-Ssc-115740	Sus scrofa	71.99	0.00e+00	1313.00
IUUC-Tgu-116696	Taeniopygia guttata	74.42	0.00e+00	1217.00
IUUC-Tru-118506	Takifugu rubripes	83.41	0.00e+00	1495.00
IUUC-Tsy-119375	Tarsius syrichta	71.53	0.00e+00	1091.00
IUUC-Tni-120392	Tetraodon nigroviridis	78.42	0.00e+00	1363.00
IUUC-Tbe-127468	Tupaia belangeri	66.93	0.00e+00	1175.00
IUUC-Ttr-128746	Tursiops truncatus	66.80	0.00e+00	1339.00
IUUC-Vpa-130697	Vicugna pacos	66.43	0.00e+00	1310.00
IUUC-Xtr-132731	Xenopus tropicalis	71.77	0.00e+00	1362.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence