iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017110

Ensembl Protein ID

Bra004082.1-P

UniProt Accession

M4CIP8; M4CIP8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra004082	Bra004082.1	Bra004082.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-09	39.0	141	180
E3 activity/RING/U-box	2.20e-10	41.5	138	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C + +++ p+++pCgH f+++C++kw       +++ +C  Cr
   Q: 141  CSFCIQLPER-PVTTPCGHNFCLKCFEKW-----IGQGKRTCAKCR 180
           9*********.9*****************.....688888898887 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteed 54
            ++C+   +l++ Pv++p+G+ +  ++ ekw+ +g++tc ++r+p+ +++
   Q: 138  NLNCSFCIQLPERPVTTPCGHNFCLKCFEKWIGQGKRTCAKCRSPIPPKM 187
           689999**************************************997765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAQLPCDNDG ACLRCKAKPP QEETLTCGTC GTPWHAACLS SPPETLASTL QWHCPDCSGE 60
IDPLLPVSGV ESGGGSDLVA AIRAIEADES LTDADKAKKR QELLSGKSAD DEDDEEEEDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCAGC TTCCTTGCGA CAACGACGGG GCGTGCCTAC GATGCAAGGC CAAGCCTCCC 60
CAGGAAGAAA CCCTCACGTG CGGCACGTGC GGCACTCCCT GGCACGCGGC GTGCCTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF00097--zf-C3HC4
PF13445--zf-RING_UBOX

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000242	Aegilops tauschii	72.30	1.00e-167	582.00
IUUC-Aml-001401	Ailuropoda melanoleuca	31.95	5.00e-46	179.00
IUUC-Atr-002603	Amborella trichopoda	65.20	0.00e+00	805.00
IUUC-Apl-003819	Anas platyrhynchos	36.36	7.00e-51	195.00
IUUC-Aly-006276	Arabidopsis lyrata	80.58	0.00e+00	1056.00
IUUC-Ath-006667	Arabidopsis thaliana	78.30	0.00e+00	1017.00
IUUC-Bta-012600	Bos taurus	36.03	2.00e-49	190.00
IUUC-Bdi-014586	Brachypodium distachyon	65.01	0.00e+00	770.00
IUUC-Bol-015519	Brassica oleracea	97.44	0.00e+00	1193.00
IUUC-Cfa-020558	Canis familiaris	47.69	1.00e-43	171.00
IUUC-Cpo-022125	Cavia porcellus	37.47	1.00e-52	201.00
IUUC-Cin-025454	Ciona intestinalis	35.12	2.00e-45	176.00
IUUC-Csv-026112	Ciona savignyi	37.29	7.00e-05	42.70
IUUC-Cgl-026498	Colletotrichum gloeosporioides	35.20	1.00e-11	64.70
IUUC-Cne-026942	Cryptococcus neoformans	46.11	4.00e-31	126.00
IUUC-Dre-028200	Danio rerio	34.96	9.00e-49	188.00
IUUC-Dno-029523	Dasypus novemcinctus	47.83	8.00e-44	172.00
IUUC-Dor-031084	Dipodomys ordii	35.11	8.00e-50	191.00
IUUC-Dse-031392	Dothistroma septosporum	36.00	5.00e-10	57.40
IUUC-Ete-032923	Echinops telfairi	43.48	1.00e-09	57.80
IUUC-Eca-033266	Equus caballus	36.07	6.00e-49	188.00
IUUC-Eeu-035077	Erinaceus europaeus	49.13	1.00e-37	150.00
IUUC-Fal-037550	Ficedula albicollis	38.72	8.00e-50	191.00
IUUC-Gmo-039452	Gadus morhua	35.79	1.00e-48	187.00
IUUC-Gga-040484	Gallus gallus	36.63	4.00e-51	196.00
IUUC-Gac-041859	Gasterosteus aculeatus	34.41	6.00e-52	199.00
IUUC-Gma-044194	Glycine max	66.22	0.00e+00	805.00
IUUC-Hvu-047471	Hordeum vulgare	72.01	0.00e+00	680.00
IUUC-Itr-047867	Ictidomys tridecemlineatus	36.65	2.00e-50	193.00
IUUC-Lch-050162	Latimeria chalumnae	36.27	8.00e-47	182.00
IUUC-Lpe-050756	Leersia perrieri	64.84	0.00e+00	803.00
IUUC-Loc-051806	Lepisosteus oculatus	36.41	8.00e-49	188.00
IUUC-Lma-052953	Leptosphaeria maculans	28.47	9.00e-11	61.60
IUUC-Meu-056189	Macropus eugenii	51.64	2.00e-27	117.00
IUUC-Mtr-058805	Medicago truncatula	66.22	0.00e+00	790.00
IUUC-Mla-058836	Melampsora laricipopulina	50.64	1.00e-39	157.00
IUUC-Mga-059759	Meleagris gallopavo	35.94	1.00e-49	191.00
IUUC-Mvi-060378	Microbotryum violaceum	52.53	3.00e-31	129.00
IUUC-Mac-064697	Musa acuminata	65.91	0.00e+00	822.00
IUUC-Mpu-065830	Mustela putorius furo	32.11	3.00e-47	182.00
IUUC-Mlu-067538	Myotis lucifugus	48.78	7.00e-44	172.00
IUUC-Ncr-068942	Neurospora crassa	31.43	2.00e-07	50.80
IUUC-Ont-072292	Oreochromis niloticus	49.28	4.00e-43	169.00
IUUC-Oan-073109	Ornithorhynchus anatinus	36.41	5.00e-48	184.00
IUUC-Ocu-074748	Oryctolagus cuniculus	33.25	2.00e-45	177.00
IUUC-Oba-075108	Oryza barthii	65.20	0.00e+00	803.00
IUUC-Obr-076572	Oryza brachyantha	65.63	0.00e+00	790.00
IUUC-Ogl-077177	Oryza glaberrima	65.20	0.00e+00	803.00
IUUC-Ogu-078298	Oryza glumaepatula	65.09	0.00e+00	803.00
IUUC-Oin-079911	Oryza indica	65.09	0.00e+00	803.00
IUUC-Olo-080527	Oryza longistaminata	57.93	0.00e+00	705.00
IUUC-Ome-081137	Oryza meridionalis	62.58	0.00e+00	757.00
IUUC-Oni-082620	Oryza nivara	65.09	0.00e+00	803.00
IUUC-Opu-083974	Oryza punctata	64.75	0.00e+00	793.00
IUUC-Oru-084976	Oryza rufipogon	65.09	0.00e+00	803.00
IUUC-Osa-085339	Oryza sativa	65.09	0.00e+00	803.00
IUUC-Ola-086706	Oryzias latipes	41.90	6.00e-44	172.00
IUUC-Psi-093033	Pelodiscus sinensis	46.98	8.00e-45	175.00
IUUC-Pma-094339	Petromyzon marinus	48.84	5.00e-44	172.00
IUUC-Ppa-095940	Physcomitrella patens	60.03	0.00e+00	754.00
IUUC-Pop-099561	Populus trichocarpa	70.32	0.00e+00	841.00
IUUC-Ppe-101961	Prunus persica	73.16	0.00e+00	885.00
IUUC-Pgr-103644	Puccinia graminis	52.05	3.00e-37	149.00
IUUC-Ptt-103867	Puccinia triticina	51.28	5.00e-40	158.00
IUUC-Pyt-104740	Pyrenophora triticirepentis	29.10	2.00e-14	74.30
IUUC-Rno-105345	Rattus norvegicus	35.48	2.00e-50	194.00
IUUC-Sce-106362	Saccharomyces cerevisiae	28.00	2.00e-08	53.10
IUUC-Sha-106687	Sarcophilus harrisii	34.43	1.00e-48	187.00
IUUC-Smo-109319	Selaginella moellendorffii	55.57	0.00e+00	645.00
IUUC-Sit-110588	Setaria italica	63.06	0.00e+00	780.00
IUUC-Sly-111415	Solanum lycopersicum	65.75	0.00e+00	818.00
IUUC-Stu-112842	Solanum tuberosum	65.65	0.00e+00	818.00
IUUC-Sbi-114726	Sorghum bicolor	65.52	0.00e+00	781.00
IUUC-Sre-115182	Sporisorium reilianum	42.49	9.00e-32	130.00
IUUC-Ssc-116081	Sus scrofa	47.22	5.00e-43	169.00
IUUC-Tgu-116945	Taeniopygia guttata	46.98	9.00e-45	174.00
IUUC-Tru-117599	Takifugu rubripes	49.76	4.00e-44	172.00
IUUC-Tca-121614	Theobroma cacao	75.83	0.00e+00	912.00
IUUC-Tae-125473	Triticum aestivum	66.12	0.00e+00	731.00
IUUC-Tme-127149	Tuber melanosporum	44.92	1.00e-23	104.00
IUUC-Tbe-127823	Tupaia belangeri	31.02	5.00e-39	155.00
IUUC-Vda-129727	Verticillium dahliae	33.83	1.00e-12	67.40
IUUC-Vvi-131413	Vitis vinifera	67.15	0.00e+00	835.00
IUUC-Xtr-132432	Xenopus tropicalis	35.38	2.00e-49	190.00
IUUC-Xma-133516	Xiphophorus maculatus	35.61	1.00e-47	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence