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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Mmu-063819
Ensembl Protein ID ENSMUSP00000031625.8
UniProt Accession Q9R0Q6; Q3UL75; ARC1A_MOUSE
Genbank Protein ID BAA84685.1; BAC36187.1; BAE26575.1; AAH01988.1
Protein Name Actin-related protein 2/3 complex subunit 1A; SOP2-like protein; Sid 329
Genbank Nucleotide ID AB024984; AK076107; AK145663; BC001988
Gene Name Arpc1a; Sid329
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000029621.14 ENSMUST00000031625.14 ENSMUSP00000031625.8
ENSMUSG00000029621.14 ENSMUST00000127694.7 ENSMUSP00000143026.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemicroRNATRANSFACRepTar
miRNAMapRAID2
Protein-protein Interaction
IIDiRefIndexMentha
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlusdbPTM
PHOSIDAmUbiSiDa
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.80e-14 54.4 51 82
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H++ +t++++ +  +++v+++ D + +vW+ +
   Q: 51   HNGHITGIDWaPKsDRIVTCGADRNAYVWSQK 82
           9999*******6669**************955 PP
   
Organism Mus musculus
Functional Description
(View)

Functional Description


     Belongs to the WD repeat ARPC1 family.
 Belongs to the WD repeat ARPC1 family.
Protein Sequence
(Fasta)
MSLHQFLLEP ITCHAWNRDR TQIALSPNNH EVHIYKKNGS QWTKAHELKE HNGHITGIDW 60
APKSDRIVTC GADRNAYVWS QKDGIWKPTL VILRINRAAT FVKWSPLENK FAVGSGARLI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-063819|E3,WD_repeat|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGGCGCTCCG GTCACTTCCG GGATCTGTCA GCCTCTCCCT CTAGGCCTCC CTCCTCCGTC 60
CGCGCCCGCC GGAGCCAGTT CGCGTCGACT GACCAGAGTC CGCGAATCGT CCGCTCCGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-063819|E3,WD_repeat|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0009--Actin-binding
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0903--Direct protein sequencing
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0005737--C:cytoplasm
GO:0070062--C:extracellular exosome
GO:0036195--C:muscle cell projection membrane
GO:0051015--F:actin filament binding
GO:0034314--P:Arp2/3 complex-mediated actin nucleation
KEGG mmu:56443
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002044 Ailuropoda melanoleuca 98.65 0.00e+00 735.00
IUUC-Atr-002844 Amborella trichopoda 51.61 7.00e-56 210.00
IUUC-Apl-003325 Anas platyrhynchos 94.32 0.00e+00 741.00
IUUC-Aca-004736 Anolis carolinensis 94.32 0.00e+00 739.00
IUUC-Ago-007966 Ashbya gossypii 38.99 6.00e-66 244.00
IUUC-Acl-008334 Aspergillus clavatus 46.94 8.00e-93 333.00
IUUC-Afl-008485 Aspergillus flavus 47.22 1.00e-89 324.00
IUUC-Afu-008780 Aspergillus fumigatus 46.67 5.00e-94 337.00
IUUC-Ani-009417 Aspergillus nidulans 47.91 3.00e-94 338.00
IUUC-Ang-009543 Aspergillus niger 48.75 2.00e-95 342.00
IUUC-Aor-010234 Aspergillus oryzae 47.08 1.00e-91 329.00
IUUC-Ate-010386 Aspergillus terreus 47.63 1.00e-95 343.00
IUUC-Ame-011852 Astyanax mexicanus 90.27 0.00e+00 713.00
IUUC-Bgr-012192 Blumeria graminis 43.33 5.00e-84 304.00
IUUC-Bta-012530 Bos taurus 98.38 0.00e+00 734.00
IUUC-Bci-013616 Botrytis cinerea 44.72 3.00e-88 318.00
IUUC-Bdi-014632 Brachypodium distachyon 43.36 1.00e-78 286.00
IUUC-Cel-018122 Caenorhabditis elegans 56.71 5.00e-113 400.00
IUUC-Cja-019362 Callithrix jacchus 98.92 0.00e+00 737.00
IUUC-Cfa-020167 Canis familiaris 98.65 0.00e+00 736.00
IUUC-Cpo-021933 Cavia porcellus 98.65 0.00e+00 738.00
IUUC-Cho-024449 Choloepus hoffmanni 75.42 3.00e-98 351.00
IUUC-Cin-025186 Ciona intestinalis 56.76 9.00e-119 419.00
IUUC-Csv-026275 Ciona savignyi 56.58 2.00e-114 405.00
IUUC-Cgl-026732 Colletotrichum gloeosporioides 44.85 5.00e-89 321.00
IUUC-Cne-026926 Cryptococcus neoformans 46.40 2.00e-98 352.00
IUUC-Dre-028057 Danio rerio 89.73 0.00e+00 708.00
IUUC-Dno-029092 Dasypus novemcinctus 98.32 0.00e+00 706.00
IUUC-Dor-030391 Dipodomys ordii 98.04 0.00e+00 707.00
IUUC-Dse-031574 Dothistroma septosporum 44.66 2.00e-83 302.00
IUUC-Dme-031907 Drosophila melanogaster 59.04 1.00e-125 442.00
IUUC-Eca-034074 Equus caballus 98.65 0.00e+00 736.00
IUUC-Eeu-035041 Erinaceus europaeus 83.26 1.00e-93 336.00
IUUC-Fca-036154 Felis catus 98.65 0.00e+00 735.00
IUUC-Fal-037279 Ficedula albicollis 94.32 0.00e+00 740.00
IUUC-Fox-037842 Fusarium oxysporum 45.96 9.00e-89 320.00
IUUC-Fso-038276 Fusarium solani 45.68 1.00e-88 319.00
IUUC-Gmo-039673 Gadus morhua 87.03 0.00e+00 644.00
IUUC-Ggr-039762 Gaeumannomyces graminis 44.44 1.00e-87 316.00
IUUC-Gga-040189 Gallus gallus 95.14 0.00e+00 744.00
IUUC-Gac-042531 Gasterosteus aculeatus 87.84 0.00e+00 650.00
IUUC-Hsa-046309 Homo sapiens 98.65 0.00e+00 735.00
IUUC-Hvu-047456 Hordeum vulgare 29.78 5.00e-16 77.40
IUUC-Itr-047864 Ictidomys tridecemlineatus 98.65 0.00e+00 735.00
IUUC-Kpa-049288 Komagataella pastoris 40.65 6.00e-76 277.00
IUUC-Lch-050427 Latimeria chalumnae 89.49 0.00e+00 703.00
IUUC-Loc-052532 Lepisosteus oculatus 91.13 0.00e+00 689.00
IUUC-Lma-053109 Leptosphaeria maculans 45.58 1.00e-88 320.00
IUUC-Laf-054271 Loxodonta africana 98.38 0.00e+00 734.00
IUUC-Mcc-054857 Macaca mulatta 97.28 0.00e+00 711.00
IUUC-Meu-056540 Macropus eugenii 92.82 0.00e+00 626.00
IUUC-Mor-057167 Magnaporthe oryzae 43.21 2.00e-84 305.00
IUUC-Mla-058886 Melampsora laricipopulina 43.91 8.00e-91 327.00
IUUC-Mga-059327 Meleagris gallopavo 95.14 0.00e+00 744.00
IUUC-Mvi-060302 Microbotryum violaceum 46.41 2.00e-94 338.00
IUUC-Mmr-060765 Microcebus murinus 97.01 0.00e+00 714.00
IUUC-Mdo-062326 Monodelphis domestica 96.22 0.00e+00 722.00
IUUC-Mac-064632 Musa acuminata 42.12 3.00e-81 295.00
IUUC-Mlu-067184 Myotis lucifugus 98.38 0.00e+00 732.00
IUUC-Nfi-068383 Neosartorya fischeri 46.94 7.00e-94 337.00
IUUC-Ncr-068777 Neurospora crassa 43.41 2.00e-87 315.00
IUUC-Nle-069900 Nomascus leucogenys 98.65 0.00e+00 736.00
IUUC-Opr-070386 Ochotona princeps 89.19 0.00e+00 647.00
IUUC-Ont-071283 Oreochromis niloticus 88.38 0.00e+00 653.00
IUUC-Oan-073139 Ornithorhynchus anatinus 95.14 0.00e+00 714.00
IUUC-Ocu-074340 Oryctolagus cuniculus 98.65 0.00e+00 735.00
IUUC-Opu-083392 Oryza punctata 33.52 5.00e-54 205.00
IUUC-Ola-087274 Oryzias latipes 86.79 0.00e+00 633.00
IUUC-Oga-088016 Otolemur garnettii 98.38 0.00e+00 733.00
IUUC-Oar-089613 Ovis aries 98.11 0.00e+00 733.00
IUUC-Ptr-091548 Pan troglodytes 98.65 0.00e+00 735.00
IUUC-Psi-093767 Pelodiscus sinensis 94.32 0.00e+00 739.00
IUUC-Pma-094124 Petromyzon marinus 78.05 1.00e-180 625.00
IUUC-Pno-095031 Phaeosphaeria nodorum 45.60 2.00e-88 319.00
IUUC-Ppa-095858 Physcomitrella patens 45.80 1.00e-86 313.00
IUUC-Pfo-097107 Poecilia formosa 88.11 0.00e+00 649.00
IUUC-Pop-098954 Populus trichocarpa 37.88 2.00e-43 169.00
IUUC-Pva-102908 Pteropus vampyrus 96.55 0.00e+00 647.00
IUUC-Pgr-103309 Puccinia graminis 44.76 2.00e-92 332.00
IUUC-Ptt-103959 Puccinia triticina 44.84 3.00e-94 338.00
IUUC-Pte-104384 Pyrenophora teres 46.52 1.00e-87 316.00
IUUC-Pyt-104686 Pyrenophora triticirepentis 46.52 1.00e-87 316.00
IUUC-Rno-105008 Rattus norvegicus 99.69 0.00e+00 650.00
IUUC-Sce-106411 Saccharomyces cerevisiae 36.94 9.00e-65 240.00
IUUC-Sha-106691 Sarcophilus harrisii 96.46 0.00e+00 719.00
IUUC-Sja-107792 Schizosaccharomyces japonicus 45.68 4.00e-88 318.00
IUUC-Spo-108053 Schizosaccharomyces pombe 44.77 3.00e-89 322.00
IUUC-Ssl-108606 Sclerotinia sclerotiorum 45.00 1.00e-88 320.00
IUUC-Smo-108836 Selaginella moellendorffii 46.01 4.00e-84 305.00
IUUC-Sit-110150 Setaria italica 42.70 1.00e-79 289.00
IUUC-Sar-113599 Sorex araneus 84.36 1.00e-170 592.00
IUUC-Sre-115090 Sporisorium reilianum 46.10 4.00e-98 351.00
IUUC-Ssc-115851 Sus scrofa 98.38 0.00e+00 733.00
IUUC-Tgu-116701 Taeniopygia guttata 94.32 0.00e+00 740.00
IUUC-Tru-117603 Takifugu rubripes 86.97 0.00e+00 656.00
IUUC-Tsy-119515 Tarsius syrichta 88.89 2.00e-74 272.00
IUUC-Tni-119844 Tetraodon nigroviridis 89.46 0.00e+00 652.00
IUUC-Tre-122045 Trichoderma reesei 45.13 4.00e-87 315.00
IUUC-Tvi-122523 Trichoderma virens 45.28 8.00e-88 317.00
IUUC-Tme-127018 Tuber melanosporum 45.21 3.00e-85 308.00
IUUC-Tbe-127321 Tupaia belangeri 98.78 0.00e+00 647.00
IUUC-Ttr-128178 Tursiops truncatus 97.70 0.00e+00 679.00
IUUC-Uma-129423 Ustilago maydis 46.06 2.00e-99 356.00
IUUC-Vda-129706 Verticillium dahliae 45.30 1.00e-88 319.00
IUUC-Xtr-132735 Xenopus tropicalis 83.83 0.00e+00 629.00
IUUC-Xma-133435 Xiphophorus maculatus 88.11 0.00e+00 649.00
IUUC-Yli-134471 Yarrowia lipolytica 46.34 2.00e-82 299.00
IUUC-Zma-135615 Zea mays 42.04 3.00e-80 292.00
Created Date 25-Jun-2017

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