iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091175

UUCD1 version

UUC-PaT-00967

Ensembl Protein ID

ENSPTRP00000059162.2

UniProt Accession

H2RDP3; H2RDP3_PANTR

Genbank Protein ID

JAA02068.1; JAA16468.1; JAA25504.1; JAA37689.1

Protein Name

Cyclin F

Genbank Nucleotide ID

AACZ03106239; GABF01005677; GABD01007596; GABE01007050

Gene Name

CCNF

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000007649.6	ENSPTRT00000067576.2	ENSPTRP00000059162.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	99.87	0.00e+00	1439.00	IUUC-Hsa-046867

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MGSGGVVHCR CAKCFCYPTK RRIRRRPRNL TILSLPEDVL FHILKWLSVE DILAVRAVHS 60
QLKDLVDNHA SVWACASFQE LWPSPGNLKL FERAAEKGNF EAAVKLGIAY LYNEGLSVSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGCG GCGGCGGTGA GTGCGGGGCG ATGTCCGCTG GTTTCTGCCC CACACCCCTT 60
CTGCCTGCCC TGCGGGGCGG ACGGCGGGTC CCGCGGGAGG GGAGGCCCTG GCGGCCTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0195--Cyclin
KW-1185--Reference proteome

Interpro

IPR028857--CCNF_metazoan
IPR013763--Cyclin-like
IPR004367--Cyclin_C-dom
IPR006671--Cyclin_N
IPR001810--F-box_dom
IPR013780--Glyco_hydro_b

PROSITE

PS00292--CYCLINS
PS50181--FBOX

Pfam

PF02984--Cyclin_C
PF00134--Cyclin_N
PF00646--F-box

SMART

SM00385--CYCLIN
SM01332--Cyclin_C
SM00256--FBOX

Gene Ontology

GO:0030054--C:cell junction
GO:0005814--C:centriole
GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0010826--P:negative regulation of centrosome duplication
GO:0001890--P:placenta development
GO:0016567--P:protein ubiquitination
GO:0000320--P:re-entry into mitotic cell cycle
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001520	Ailuropoda melanoleuca	86.12	0.00e+00	1236.00
IUUC-Apl-003215	Anas platyrhynchos	69.66	0.00e+00	1077.00
IUUC-Ame-011700	Astyanax mexicanus	60.12	0.00e+00	716.00
IUUC-Bta-013230	Bos taurus	86.69	0.00e+00	1249.00
IUUC-Cja-019256	Callithrix jacchus	94.13	0.00e+00	1402.00
IUUC-Cfa-020123	Canis familiaris	86.89	0.00e+00	1253.00
IUUC-Cpo-021599	Cavia porcellus	85.50	0.00e+00	1275.00
IUUC-Csa-023518	Chlorocebus sabaeus	92.11	0.00e+00	1325.00
IUUC-Dre-028186	Danio rerio	55.16	0.00e+00	691.00
IUUC-Dno-029401	Dasypus novemcinctus	80.83	0.00e+00	1140.00
IUUC-Dor-031087	Dipodomys ordii	80.03	0.00e+00	1138.00
IUUC-Ete-032869	Echinops telfairi	84.91	1.00e-74	273.00
IUUC-Eca-033473	Equus caballus	89.27	0.00e+00	1286.00
IUUC-Eeu-034533	Erinaceus europaeus	71.07	8.00e-178	617.00
IUUC-Fca-035961	Felis catus	85.83	0.00e+00	1218.00
IUUC-Fal-036659	Ficedula albicollis	66.41	0.00e+00	1003.00
IUUC-Gmo-039557	Gadus morhua	58.59	0.00e+00	637.00
IUUC-Gga-040389	Gallus gallus	66.04	0.00e+00	873.00
IUUC-Gac-042059	Gasterosteus aculeatus	60.69	0.00e+00	676.00
IUUC-Ggo-044497	Gorilla gorilla	99.36	0.00e+00	1442.00
IUUC-Hsa-046867	Homo sapiens	99.87	0.00e+00	1439.00
IUUC-Itr-047922	Ictidomys tridecemlineatus	87.84	0.00e+00	1298.00
IUUC-Lch-050143	Latimeria chalumnae	64.79	0.00e+00	858.00
IUUC-Loc-052538	Lepisosteus oculatus	65.91	4.00e-47	179.00
IUUC-Laf-054481	Loxodonta africana	81.68	0.00e+00	1101.00
IUUC-Mcc-055426	Macaca mulatta	97.58	0.00e+00	1419.00
IUUC-Meu-056150	Macropus eugenii	71.28	0.00e+00	932.00
IUUC-Mga-059822	Meleagris gallopavo	65.25	0.00e+00	783.00
IUUC-Mmr-061785	Microcebus murinus	90.84	0.00e+00	1303.00
IUUC-Mdo-062763	Monodelphis domestica	73.94	0.00e+00	1076.00
IUUC-Mmu-064391	Mus musculus	83.76	0.00e+00	1191.00
IUUC-Mpu-065756	Mustela putorius furo	85.94	0.00e+00	1221.00
IUUC-Mlu-067607	Myotis lucifugus	85.90	0.00e+00	1228.00
IUUC-Nle-069147	Nomascus leucogenys	97.46	0.00e+00	1380.00
IUUC-Opr-071129	Ochotona princeps	84.30	0.00e+00	1254.00
IUUC-Ont-072031	Oreochromis niloticus	60.39	0.00e+00	706.00
IUUC-Oan-073514	Ornithorhynchus anatinus	66.48	1.00e-172	598.00
IUUC-Ocu-074914	Oryctolagus cuniculus	86.06	0.00e+00	1201.00
IUUC-Ola-086606	Oryzias latipes	58.59	0.00e+00	662.00
IUUC-Oga-088632	Otolemur garnettii	89.99	0.00e+00	1293.00
IUUC-Oar-090320	Ovis aries	82.41	0.00e+00	1192.00
IUUC-Pan-092003	Papio anubis	97.20	0.00e+00	1402.00
IUUC-Psi-093719	Pelodiscus sinensis	68.65	0.00e+00	1018.00
IUUC-Pma-094390	Petromyzon marinus	56.48	4.00e-125	441.00
IUUC-Pfo-096911	Poecilia formosa	60.39	0.00e+00	723.00
IUUC-Pab-097562	Pongo abelii	98.35	0.00e+00	1435.00
IUUC-Pca-100748	Procavia capensis	68.32	4.00e-111	395.00
IUUC-Pva-102168	Pteropus vampyrus	84.12	0.00e+00	1219.00
IUUC-Rno-105157	Rattus norvegicus	84.99	0.00e+00	1214.00
IUUC-Sha-107184	Sarcophilus harrisii	72.73	0.00e+00	1083.00
IUUC-Stu-112748	Solanum tuberosum	35.00	1.30e-01	30.80
IUUC-Sar-113086	Sorex araneus	70.68	7.00e-88	318.00
IUUC-Ssc-116347	Sus scrofa	86.69	0.00e+00	1222.00
IUUC-Tgu-117463	Taeniopygia guttata	66.24	0.00e+00	993.00
IUUC-Tru-118348	Takifugu rubripes	59.94	0.00e+00	723.00
IUUC-Tsy-119459	Tarsius syrichta	85.84	3.00e-100	359.00
IUUC-Tni-120853	Tetraodon nigroviridis	62.00	0.00e+00	677.00
IUUC-Tbe-127361	Tupaia belangeri	75.51	0.00e+00	689.00
IUUC-Ttr-128214	Tursiops truncatus	77.31	0.00e+00	1030.00
IUUC-Xtr-132479	Xenopus tropicalis	67.58	0.00e+00	810.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence