iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d029561	Zm00001d029561_T012	Zm00001d029561_T012
Zm00001d029561	Zm00001d029561_T001	Zm00001d029561_T001
Zm00001d029561	Zm00001d029561_T003	Zm00001d029561_T003
Zm00001d029561	Zm00001d029561_T004	Zm00001d029561_T004
Zm00001d029561	Zm00001d029561_T002	Zm00001d029561_T002
Zm00001d029561	Zm00001d029561_T013	Zm00001d029561_T013
Zm00001d029561	Zm00001d029561_T007	Zm00001d029561_T007
Zm00001d029561	Zm00001d029561_T010	Zm00001d029561_T010
Zm00001d029561	Zm00001d029561_T008	Zm00001d029561_T008
Zm00001d029561	Zm00001d029561_T009	Zm00001d029561_T009
Zm00001d029561	Zm00001d029561_T006	Zm00001d029561_T006

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.40e-20	73.5	955	1028

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p+efl+pI+++lM+dPv+lp s +t+dr  I ++l s+ + +P++r++lt+++l+Pn++l+  i++++ +++s
   Q: 955  DIPDEFLDPIQYTLMKDPVTLPsSKVTVDRPVIIRHLLSDST-DPFNRSHLTQDMLIPNTELKLQIEEFVRSQQS 1028
           69********************9*****************98.**************************998876 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MASPSPASAR PQRSPDEVED IILRKILLVS LTPPANPSPA VAYLELTAAE LLSESRPLLA 60
LRDAAERLLI DRLSLPDPPA GSPTPFAYLV SAFRRAADEA RKISTIRDAA LRARLAASIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGTCTGCTC GAATCTTGAT CCACCACAAC ACGCGGTTCC CCGAGTCGAA GGCTCGAAGC 60
AGCAGAGCCA GCAGCGAGCC GCCGCCCGCC GCCGATGGCG TCCCCATCGC CGGCTTCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019474--Ub_conjug_fac_E4_core
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box
PF10408--Ufd2P_core

SMART

SM00504--Ubox

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002396	Ailuropoda melanoleuca	31.36	2.00e-92	333.00
IUUC-Apl-003747	Anas platyrhynchos	30.98	9.00e-98	351.00
IUUC-Aca-004866	Anolis carolinensis	31.16	3.00e-98	353.00
IUUC-Ago-007880	Ashbya gossypii	31.54	1.00e-83	304.00
IUUC-Afu-008766	Aspergillus fumigatus	30.00	9.00e-107	381.00
IUUC-Ang-009837	Aspergillus niger	29.88	1.00e-103	370.00
IUUC-Ate-010300	Aspergillus terreus	31.49	9.00e-101	361.00
IUUC-Ame-011355	Astyanax mexicanus	30.73	9.00e-100	358.00
IUUC-Bta-013056	Bos taurus	31.49	2.00e-92	333.00
IUUC-Cel-018606	Caenorhabditis elegans	26.35	3.00e-56	213.00
IUUC-Cja-018872	Callithrix jacchus	31.28	3.00e-93	336.00
IUUC-Cfa-020045	Canis familiaris	31.36	1.00e-92	334.00
IUUC-Cpo-022309	Cavia porcellus	31.15	6.00e-93	335.00
IUUC-Cre-022726	Chlamydomonas reinhardtii	35.78	3.00e-54	205.00
IUUC-Cho-024614	Choloepus hoffmanni	40.05	2.00e-77	283.00
IUUC-Csv-026081	Ciona savignyi	42.86	5.00e-35	139.00
IUUC-Dre-027979	Danio rerio	30.49	7.00e-95	342.00
IUUC-Dno-029282	Dasypus novemcinctus	31.19	4.00e-92	333.00
IUUC-Ete-032519	Echinops telfairi	38.48	3.00e-59	223.00
IUUC-Eeu-035315	Erinaceus europaeus	41.97	9.00e-35	142.00
IUUC-Fca-035658	Felis catus	31.32	7.00e-91	328.00
IUUC-Hsa-046880	Homo sapiens	31.27	3.00e-94	340.00
IUUC-Kpa-049211	Komagataella pastoris	29.51	4.00e-77	282.00
IUUC-Laf-053646	Loxodonta africana	31.23	3.00e-92	333.00
IUUC-Mcc-055588	Macaca mulatta	31.28	1.00e-92	334.00
IUUC-Mvi-060343	Microbotryum violaceum	31.93	1.00e-111	397.00
IUUC-Mmr-061173	Microcebus murinus	36.20	2.00e-77	284.00
IUUC-Mdo-062102	Monodelphis domestica	30.90	2.00e-93	337.00
IUUC-Mmu-063223	Mus musculus	31.99	1.00e-94	341.00
IUUC-Mlu-068018	Myotis lucifugus	31.45	1.00e-91	331.00
IUUC-Nle-069605	Nomascus leucogenys	31.16	3.00e-92	333.00
IUUC-Opr-071011	Ochotona princeps	36.78	7.00e-54	206.00
IUUC-Ocu-074910	Oryctolagus cuniculus	31.74	3.00e-95	343.00
IUUC-Ola-086323	Oryzias latipes	30.52	2.00e-93	337.00
IUUC-Oga-087969	Otolemur garnettii	31.45	6.00e-88	319.00
IUUC-Oar-090020	Ovis aries	31.49	2.00e-92	333.00
IUUC-Ptr-091589	Pan troglodytes	31.27	4.00e-94	339.00
IUUC-Psi-093013	Pelodiscus sinensis	30.63	2.00e-96	347.00
IUUC-Pma-094627	Petromyzon marinus	38.35	8.00e-80	290.00
IUUC-Pva-102459	Pteropus vampyrus	31.36	1.00e-91	331.00
IUUC-Ptt-104001	Puccinia triticina	36.18	1.00e-32	135.00
IUUC-Rno-105719	Rattus norvegicus	31.74	4.00e-96	346.00
IUUC-Sce-106135	Saccharomyces cerevisiae	29.46	2.00e-70	260.00
IUUC-Sha-106760	Sarcophilus harrisii	31.51	1.00e-93	337.00
IUUC-Sre-114967	Sporisorium reilianum	33.54	4.00e-111	395.00
IUUC-Tsy-118926	Tarsius syrichta	31.61	4.00e-93	336.00
IUUC-Tbe-127533	Tupaia belangeri	31.36	5.00e-93	335.00
IUUC-Ttr-128757	Tursiops truncatus	30.73	7.00e-89	322.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence