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Tag Content
UUCD2 ID IUUC-Sbi-114702
UUCD1 version UUC-SoB-01396
Ensembl Protein ID Sb09g025880.1
UniProt Accession C5Z1B2; C5Z1B2_SORBI
Genbank Protein ID EES19826.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000768
Gene Name SORBI_009G201200
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb09g025880 Sb09g025880.1 Sb09g025880.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.30e-30 105.0 374 404
UBD/Beta-Prp 7.70e-55 187.0 332 584
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           +v+c+a+ +d  ll++G+dD+++kvW +++g
   Q: 374  DVNCIAYsPDsQLLATGADDNKVKVWTVSSG 404
           79******999***************98877 PP
   

   UBD/Beta-Prp
   S: 13   itcvkfspdksllatgsrd.gtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgd 107
           it   f   +++l+ g++  g + vw++++++++ + +gh   v+++ +spd+++l+tg++D+ +kvw +s+g c++t+++h++ v++++f+++++
   Q: 332  ITTAIFNSLGNWLVFGCAKlGQLLVWEWRSESYILKQQGHYFDVNCIAYSPDSQLLATGADDNKVKVWTVSSGFCFITFSEHTNAVTAVHFMANNH 427
           56667777899999999866899************************************************************************* PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrt.vrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldg 202
           +l+s+s d tir wdl  +  ++++ ++  +   +++ +++g ++ +G+lD++ + +W++ktg+ll+ l+g h+++v+ l f++    l+s s d+
   Q: 428  SLLSASLDGTIRAWDLFRYRNFRTFTTPSPRQFVSLTADQSGEVICAGTLDSFeIFVWSMKTGRLLDVLSG-HEGPVHGLMFSPINAILASSSWDK 522
           ***********************99999999999*****************965****************9.************************ PP
   S: 203  tvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           tv+lwd+ +++  ++   h+  v+ ++  p++  +++ + Dg i++Wd   g l+ t+++++
   Q: 523  TVRLWDVFESKGAVETFQHSHDVLTLAYRPDGRQIACSTLDGLINFWDPSDGLLMYTIEGRR 584
           ********9999999999******************************99988888888766 PP
   
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MNYRFQNLLG APYRGGDAVF AGDSPVLLSA VGNRVASTDL GASSSLTLPF ESSSSVTRLA 60
TSPSGDFLLA ADDNGRALYA NLRRRAVLHR VSFKGAPSAI RFSPDGQLIA VAVGKVVQIW 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sbi-114702|E3,WD_repeat;UBD,Beta-Prp|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCCCCCAAA ACCCTAGGCG GCCGCCCACC CGACCGCCTT CCCCCTCCCT CGTCTCCCGC 60
CATGAATTAC CGCTTCCAGA ACCTCCTCGG CGCGCCGTAC CGCGGCGGCG ACGCCGTCTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-114702|E3,WD_repeat;UBD,Beta-Prp|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04003--Utp12
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0009553--P:embryo sac development
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000028--P:ribosomal small subunit assembly
KEGG sbi:SORBI_09g025880
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001932 Ailuropoda melanoleuca 41.00 0.00e+00 707.00
IUUC-Atr-003033 Amborella trichopoda 63.28 0.00e+00 1140.00
IUUC-Apl-003219 Anas platyrhynchos 40.97 0.00e+00 715.00
IUUC-Aca-004950 Anolis carolinensis 41.29 0.00e+00 723.00
IUUC-Aly-006213 Arabidopsis lyrata 65.44 0.00e+00 1179.00
IUUC-Ath-006593 Arabidopsis thaliana 64.88 0.00e+00 1172.00
IUUC-Ago-007916 Ashbya gossypii 42.22 0.00e+00 720.00
IUUC-Acl-008225 Aspergillus clavatus 43.30 0.00e+00 750.00
IUUC-Afl-008390 Aspergillus flavus 44.36 0.00e+00 774.00
IUUC-Afu-009039 Aspergillus fumigatus 44.22 0.00e+00 757.00
IUUC-Ani-009228 Aspergillus nidulans 41.37 0.00e+00 654.00
IUUC-Ang-009663 Aspergillus niger 42.83 0.00e+00 724.00
IUUC-Aor-009923 Aspergillus oryzae 44.36 0.00e+00 774.00
IUUC-Ate-010264 Aspergillus terreus 44.63 0.00e+00 769.00
IUUC-Ame-010790 Astyanax mexicanus 35.34 2.00e-69 255.00
IUUC-Bgr-012066 Blumeria graminis 42.12 0.00e+00 731.00
IUUC-Bta-012399 Bos taurus 41.68 0.00e+00 702.00
IUUC-Bci-013757 Botrytis cinerea 43.55 0.00e+00 729.00
IUUC-Bdi-015028 Brachypodium distachyon 90.95 0.00e+00 1535.00
IUUC-Bol-016521 Brassica oleracea 66.21 0.00e+00 1159.00
IUUC-Bra-017096 Brassica rapa 66.48 0.00e+00 1162.00
IUUC-Cel-018690 Caenorhabditis elegans 32.67 5.00e-140 491.00
IUUC-Cja-019229 Callithrix jacchus 42.47 0.00e+00 722.00
IUUC-Cfa-020504 Canis familiaris 41.36 0.00e+00 701.00
IUUC-Cpo-021574 Cavia porcellus 42.87 0.00e+00 730.00
IUUC-Cre-022756 Chlamydomonas reinhardtii 51.78 0.00e+00 652.00
IUUC-Csa-023436 Chlorocebus sabaeus 42.47 0.00e+00 703.00
IUUC-Cin-025397 Ciona intestinalis 41.24 7.00e-160 556.00
IUUC-Csv-026194 Ciona savignyi 46.13 7.00e-143 500.00
IUUC-Cgl-026684 Colletotrichum gloeosporioides 41.92 0.00e+00 700.00
IUUC-Cne-027031 Cryptococcus neoformans 44.04 0.00e+00 792.00
IUUC-Cme-027276 Cyanidioschyzon merolae 31.58 2.00e-106 379.00
IUUC-Dre-027514 Danio rerio 41.36 0.00e+00 711.00
IUUC-Dno-029191 Dasypus novemcinctus 44.04 0.00e+00 654.00
IUUC-Dor-030149 Dipodomys ordii 42.08 0.00e+00 718.00
IUUC-Dse-031260 Dothistroma septosporum 45.20 8.00e-145 506.00
IUUC-Dme-032043 Drosophila melanogaster 38.59 5.00e-178 617.00
IUUC-Ete-033102 Echinops telfairi 46.66 2.00e-155 541.00
IUUC-Eca-033223 Equus caballus 41.44 0.00e+00 715.00
IUUC-Fca-035795 Felis catus 39.02 0.00e+00 647.00
IUUC-Fal-036830 Ficedula albicollis 41.74 0.00e+00 715.00
IUUC-Fox-037835 Fusarium oxysporum 40.97 0.00e+00 687.00
IUUC-Fso-038324 Fusarium solani 41.18 0.00e+00 701.00
IUUC-Gmo-039355 Gadus morhua 41.61 0.00e+00 713.00
IUUC-Ggr-039840 Gaeumannomyces graminis 41.32 0.00e+00 656.00
IUUC-Gga-040907 Gallus gallus 49.06 5.00e-160 556.00
IUUC-Gac-042624 Gasterosteus aculeatus 41.52 0.00e+00 699.00
IUUC-Gma-043034 Glycine max 70.23 0.00e+00 1324.00
IUUC-Hsa-046145 Homo sapiens 42.36 0.00e+00 723.00
IUUC-Hvu-047416 Hordeum vulgare 89.27 0.00e+00 1526.00
IUUC-Itr-049083 Ictidomys tridecemlineatus 42.13 0.00e+00 724.00
IUUC-Kpa-049150 Komagataella pastoris 40.74 0.00e+00 656.00
IUUC-Lch-049460 Latimeria chalumnae 41.13 1.00e-180 625.00
IUUC-Lpe-050840 Leersia perrieri 88.95 0.00e+00 1523.00
IUUC-Loc-052733 Lepisosteus oculatus 41.56 0.00e+00 721.00
IUUC-Lma-053277 Leptosphaeria maculans 43.84 0.00e+00 746.00
IUUC-Laf-054294 Loxodonta africana 42.48 0.00e+00 693.00
IUUC-Mcc-054624 Macaca mulatta 42.36 0.00e+00 723.00
IUUC-Meu-056665 Macropus eugenii 44.14 8.00e-97 347.00
IUUC-Mor-057288 Magnaporthe oryzae 41.88 0.00e+00 694.00
IUUC-Mpo-057594 Magnaporthe poae 41.68 0.00e+00 670.00
IUUC-Mtr-058700 Medicago truncatula 73.13 0.00e+00 1337.00
IUUC-Mla-058846 Melampsora laricipopulina 42.84 0.00e+00 723.00
IUUC-Mga-059207 Meleagris gallopavo 38.57 3.00e-177 615.00
IUUC-Mvi-060327 Microbotryum violaceum 45.54 0.00e+00 799.00
IUUC-Mmr-061264 Microcebus murinus 42.49 0.00e+00 699.00
IUUC-Mdo-062327 Monodelphis domestica 40.92 0.00e+00 699.00
IUUC-Mmu-063542 Mus musculus 41.14 0.00e+00 696.00
IUUC-Mac-065142 Musa acuminata 72.90 0.00e+00 1310.00
IUUC-Mpu-066098 Mustela putorius furo 42.32 0.00e+00 630.00
IUUC-Mlu-067056 Myotis lucifugus 38.80 5.00e-173 600.00
IUUC-Nfi-068323 Neosartorya fischeri 43.96 0.00e+00 761.00
IUUC-Ncr-068925 Neurospora crassa 41.80 0.00e+00 721.00
IUUC-Nle-068970 Nomascus leucogenys 42.66 0.00e+00 723.00
IUUC-Opr-070966 Ochotona princeps 54.43 1.00e-108 386.00
IUUC-Ont-071252 Oreochromis niloticus 41.35 0.00e+00 709.00
IUUC-Oan-072737 Ornithorhynchus anatinus 41.08 0.00e+00 686.00
IUUC-Oba-075794 Oryza barthii 88.37 0.00e+00 1519.00
IUUC-Obr-076617 Oryza brachyantha 90.12 0.00e+00 1566.00
IUUC-Ogl-077022 Oryza glaberrima 90.12 0.00e+00 1574.00
IUUC-Ogu-078757 Oryza glumaepatula 74.47 0.00e+00 1226.00
IUUC-Oin-079813 Oryza indica 89.79 0.00e+00 1566.00
IUUC-Olo-080265 Oryza longistaminata 90.12 0.00e+00 1565.00
IUUC-Ome-081494 Oryza meridionalis 90.12 0.00e+00 1571.00
IUUC-Oni-082639 Oryza nivara 74.58 0.00e+00 1226.00
IUUC-Opu-084005 Oryza punctata 88.39 0.00e+00 1570.00
IUUC-Oru-084883 Oryza rufipogon 74.13 0.00e+00 1219.00
IUUC-Osa-086158 Oryza sativa 89.79 0.00e+00 1568.00
IUUC-Ola-086822 Oryzias latipes 41.50 0.00e+00 712.00
IUUC-Olu-087741 Ostreococcus lucimarinus 32.80 2.00e-21 93.60
IUUC-Oga-088887 Otolemur garnettii 42.21 0.00e+00 701.00
IUUC-Oar-090110 Ovis aries 40.52 0.00e+00 661.00
IUUC-Pan-092808 Papio anubis 42.73 0.00e+00 731.00
IUUC-Psi-093954 Pelodiscus sinensis 41.69 0.00e+00 726.00
IUUC-Pno-094922 Phaeosphaeria nodorum 44.39 0.00e+00 760.00
IUUC-Ppa-095678 Physcomitrella patens 57.22 0.00e+00 952.00
IUUC-Pfo-097175 Poecilia formosa 42.16 0.00e+00 728.00
IUUC-Pab-098155 Pongo abelii 42.70 0.00e+00 727.00
IUUC-Pop-099635 Populus trichocarpa 72.45 0.00e+00 1276.00
IUUC-Pca-100947 Procavia capensis 39.48 0.00e+00 659.00
IUUC-Ppe-101552 Prunus persica 72.76 0.00e+00 1330.00
IUUC-Pva-102744 Pteropus vampyrus 38.44 6.00e-173 600.00
IUUC-Pgr-103389 Puccinia graminis 42.01 0.00e+00 709.00
IUUC-Ptt-103953 Puccinia triticina 35.67 8.00e-160 556.00
IUUC-Pte-104079 Pyrenophora teres 44.21 0.00e+00 750.00
IUUC-Pyt-104656 Pyrenophora triticirepentis 44.21 0.00e+00 750.00
IUUC-Rno-105502 Rattus norvegicus 41.18 0.00e+00 717.00
IUUC-Sce-106390 Saccharomyces cerevisiae 42.70 0.00e+00 740.00
IUUC-Sha-107264 Sarcophilus harrisii 41.15 3.00e-91 328.00
IUUC-Sja-107674 Schizosaccharomyces japonicus 41.65 0.00e+00 738.00
IUUC-Spo-108348 Schizosaccharomyces pombe 42.60 0.00e+00 741.00
IUUC-Smo-109327 Selaginella moellendorffii 60.67 0.00e+00 1076.00
IUUC-Sit-110304 Setaria italica 95.02 0.00e+00 1671.00
IUUC-Sly-111620 Solanum lycopersicum 78.82 0.00e+00 956.00
IUUC-Stu-112877 Solanum tuberosum 71.99 0.00e+00 1325.00
IUUC-Sre-115129 Sporisorium reilianum 43.94 0.00e+00 751.00
IUUC-Ssc-115931 Sus scrofa 43.30 5.00e-95 340.00
IUUC-Tgu-116787 Taeniopygia guttata 41.87 0.00e+00 716.00
IUUC-Tru-118218 Takifugu rubripes 41.74 0.00e+00 719.00
IUUC-Tsy-119401 Tarsius syrichta 46.64 7.00e-126 444.00
IUUC-Tni-120046 Tetraodon nigroviridis 41.48 0.00e+00 685.00
IUUC-Tca-121685 Theobroma cacao 70.83 0.00e+00 1297.00
IUUC-Tre-122154 Trichoderma reesei 42.03 0.00e+00 726.00
IUUC-Tvi-122451 Trichoderma virens 41.87 0.00e+00 721.00
IUUC-Tae-125397 Triticum aestivum 92.39 0.00e+00 876.00
IUUC-Tur-126650 Triticum urartu 90.45 0.00e+00 1427.00
IUUC-Tme-127005 Tuber melanosporum 43.95 0.00e+00 741.00
IUUC-Tbe-128102 Tupaia belangeri 42.88 1.00e-126 446.00
IUUC-Ttr-128259 Tursiops truncatus 42.55 0.00e+00 702.00
IUUC-Uma-129511 Ustilago maydis 44.61 0.00e+00 751.00
IUUC-Vda-129833 Verticillium dahliae 38.68 0.00e+00 628.00
IUUC-Vvi-131572 Vitis vinifera 71.32 0.00e+00 1265.00
IUUC-Xtr-131776 Xenopus tropicalis 37.34 4.00e-66 245.00
IUUC-Xma-133887 Xiphophorus maculatus 42.05 0.00e+00 710.00
IUUC-Yli-134427 Yarrowia lipolytica 41.42 0.00e+00 724.00
IUUC-Zma-135980 Zea mays 96.61 0.00e+00 1632.00
Created Date 25-Jun-2017

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