iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s08270	POPTR_0011s08270.2	POPTR_0011s08270.2
POPTR_0011s08270	POPTR_0011s08270.1	POPTR_0011s08270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/Cullin	9.30e-66	224.0	1	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/Cullin

   S: 418  viekLkeecgaeftskLerMfqdlkvSedlnrqFkeeken.teesesvelsvlvLsagaWptasetekvsLPaelektiekfeefYlekhs 507
           +i+kLk+ecg +ft+kLe+Mf+d+++S+++n+ F++  ++ t+   ++e+sv vL++g+Wpt++ +  v LP+el+ ++++f+efYl+k s
   Q: 1    MISKLKTECGSQFTNKLEGMFKDIELSKEINESFRQSSQArTKLPSGIEMSVHVLTTGYWPTYPPMD-VRLPHELNVYQDIFKEFYLSKYS 90
           8**********************************887761555699*****************988.*********************** PP
   S: 508  gRkLqWqhtlgraelkaelkkgkyelqVstfQmavLLafnnsekvsveelkkatelpeeeLrrtlqsLvsskkqvlkkepeskeieeedlf 598
           gR+L Wq +lg++ lkae+ kgk+el+Vs fQ++vL++fn+ +k+s++++k++t+++++eLrrtlqsL+++k +vl+k p+++++ee+d+f
   Q: 91   GRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEEDDSF 181
           ******************************************************************************************* PP
   S: 599  svNqef 604
           ++N+ f
   Q: 182  VFNEGF 187
           ***987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MISKLKTECG SQFTNKLEGM FKDIELSKEI NESFRQSSQA RTKLPSGIEM SVHVLTTGYW 60
PTYPPMDVRL PHELNVYQDI FKEFYLSKYS GRRLMWQNSL GHCVLKAEFP KGKKELAVSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCGTCCTG CTGAGCTGAT TGCAAAGTTT TTGGACGAGA AGCTTCGTGC TGGGAATAAG 60
GGTACATCCG AGGAAGAGTT GGAGGGTACA CTTGATAAAG TTTTGGTTTT ATTCAGGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS50069--CULLIN_2

Pfam

PF00888--Cullin

SMART

SM00182--CULLIN

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000285	Aegilops tauschii	92.31	7.00e-161	560.00
IUUC-Bdi-014223	Brachypodium distachyon	92.31	2.00e-160	559.00
IUUC-Cho-024838	Choloepus hoffmanni	67.13	1.00e-116	413.00
IUUC-Dno-029483	Dasypus novemcinctus	67.13	7.00e-116	411.00
IUUC-Gma-043746	Glycine max	98.60	1.00e-169	587.00
IUUC-Lpe-051446	Leersia perrieri	93.36	1.00e-161	563.00
IUUC-Mpo-057342	Magnaporthe poae	45.92	5.00e-70	258.00
IUUC-Oba-075198	Oryza barthii	94.06	1.00e-162	566.00
IUUC-Obr-076095	Oryza brachyantha	93.36	2.00e-162	565.00
IUUC-Ogl-077032	Oryza glaberrima	94.06	7.00e-163	567.00
IUUC-Ogu-078051	Oryza glumaepatula	94.06	8.00e-163	566.00
IUUC-Oin-079399	Oryza indica	94.06	1.00e-162	566.00
IUUC-Olo-080988	Oryza longistaminata	94.06	6.00e-163	567.00
IUUC-Ome-081600	Oryza meridionalis	94.06	1.00e-162	566.00
IUUC-Oni-082623	Oryza nivara	94.06	2.00e-162	565.00
IUUC-Opu-083762	Oryza punctata	93.71	7.00e-162	564.00
IUUC-Oru-084499	Oryza rufipogon	94.06	1.00e-162	566.00
IUUC-Ppa-095688	Physcomitrella patens	91.61	3.00e-158	551.00
IUUC-Pca-100391	Procavia capensis	64.31	3.00e-97	348.00
IUUC-Smo-109313	Selaginella moellendorffii	91.61	9.00e-161	560.00
IUUC-Sit-110626	Setaria italica	93.36	3.00e-162	565.00
IUUC-Sar-112956	Sorex araneus	65.38	4.00e-112	398.00
IUUC-Sbi-113931	Sorghum bicolor	94.06	1.00e-163	569.00
IUUC-Ssc-115852	Sus scrofa	67.13	1.00e-116	411.00
IUUC-Tsy-119517	Tarsius syrichta	67.13	2.00e-116	412.00
IUUC-Tae-125265	Triticum aestivum	92.31	1.00e-160	559.00
IUUC-Tur-126032	Triticum urartu	91.96	1.00e-160	559.00
IUUC-Ttr-129112	Tursiops truncatus	67.13	2.00e-116	412.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence