iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107902

Ensembl Protein ID

EEB08086

UniProt Accession

B6K3M9; B6K3M9_SCHJY

Genbank Protein ID

EEB08086.1

Protein Name

SCF ubiquitin ligase complex subunit Skp1

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_03219

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_03219	EEB08086	EEB08086

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	6.40e-30	101.1	111	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLd++ckt+a+mi+gk+pe+iRktFni nDftpeEe+++R+En+WA
   Q: 111  KPLLDTGCKTIANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
           79*********************************************9 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MSKVKLLSSD NEEFTVDRIV AEKSILIKNM LEDMGEMNVP IPLPNVSSNV LRKIIEWCEH 60
HKNDLYTGNE DETEIRLKKS TDIDEWDQKF ISVDQEMLFE IILASNYLDI KPLLDTGCKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCACTCTCT AAATAATTTA TCTAATTATA CTAGTGAACA CACTTCGGCA ACTTGTGGTC 60
ACTCATCAAG TAAACACTAT TGACACTACG TGTCTCATCT ACCAATATCA ATTGCTACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0005829--C:cytosol
GO:0043224--C:nuclear SCF ubiquitin ligase complex
GO:0043291--C:RAVE complex
GO:0017117--C:single-stranded DNA-dependent ATP-dependent DNA helicase complex
GO:0016874--F:ligase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0000920--P:cell separation after cytokinesis
GO:0045841--P:negative regulation of mitotic metaphase/anaphase transition
GO:0006998--P:nuclear envelope organization
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0060542--P:regulation of strand invasion
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000465	Aegilops tauschii	50.32	7.00e-39	150.00
IUUC-Aml-002023	Ailuropoda melanoleuca	56.36	2.00e-43	166.00
IUUC-Atr-002858	Amborella trichopoda	55.13	2.00e-34	135.00
IUUC-Apl-003393	Anas platyrhynchos	56.36	2.00e-43	166.00
IUUC-Aca-004709	Anolis carolinensis	56.36	2.00e-43	166.00
IUUC-Aly-006236	Arabidopsis lyrata	47.44	4.00e-38	148.00
IUUC-Ath-007456	Arabidopsis thaliana	49.03	2.00e-38	149.00
IUUC-Ago-007847	Ashbya gossypii	53.14	2.00e-50	189.00
IUUC-Acl-008178	Aspergillus clavatus	70.00	1.00e-62	229.00
IUUC-Afl-008452	Aspergillus flavus	69.81	1.00e-61	226.00
IUUC-Afu-008785	Aspergillus fumigatus	70.81	3.00e-63	231.00
IUUC-Ani-009312	Aspergillus nidulans	69.23	2.00e-59	219.00
IUUC-Aor-010012	Aspergillus oryzae	69.81	1.00e-61	226.00
IUUC-Ate-010375	Aspergillus terreus	70.51	2.00e-61	225.00
IUUC-Ame-011025	Astyanax mexicanus	56.36	1.00e-43	166.00
IUUC-Bgr-012280	Blumeria graminis	65.07	3.00e-46	175.00
IUUC-Bta-013519	Bos taurus	56.36	2.00e-43	166.00
IUUC-Bci-013888	Botrytis cinerea	66.67	6.00e-41	157.00
IUUC-Bdi-014547	Brachypodium distachyon	49.03	2.00e-32	129.00
IUUC-Bol-016431	Brassica oleracea	51.28	1.00e-34	136.00
IUUC-Bra-017558	Brassica rapa	48.41	9.00e-38	147.00
IUUC-Cel-018653	Caenorhabditis elegans	54.60	2.00e-43	166.00
IUUC-Cja-019785	Callithrix jacchus	55.48	7.00e-39	150.00
IUUC-Cfa-020931	Canis familiaris	56.36	3.00e-43	165.00
IUUC-Cpo-022487	Cavia porcellus	55.76	3.00e-41	158.00
IUUC-Cre-022751	Chlamydomonas reinhardtii	52.83	1.00e-39	153.00
IUUC-Csa-023459	Chlorocebus sabaeus	55.76	6.00e-43	164.00
IUUC-Cho-024854	Choloepus hoffmanni	46.88	1.00e-11	60.10
IUUC-Cin-025538	Ciona intestinalis	52.44	8.00e-41	157.00
IUUC-Csv-025865	Ciona savignyi	53.66	1.00e-43	166.00
IUUC-Cgl-026548	Colletotrichum gloeosporioides	66.22	7.00e-54	200.00
IUUC-Cne-027058	Cryptococcus neoformans	67.50	3.00e-61	225.00
IUUC-Cme-027174	Cyanidioschyzon merolae	44.59	2.00e-33	132.00
IUUC-Dre-027756	Danio rerio	56.36	1.00e-43	166.00
IUUC-Dno-028924	Dasypus novemcinctus	56.36	2.00e-43	166.00
IUUC-Dor-030847	Dipodomys ordii	52.44	2.00e-38	149.00
IUUC-Dse-031209	Dothistroma septosporum	68.55	3.00e-59	218.00
IUUC-Dme-032028	Drosophila melanogaster	54.27	3.00e-46	175.00
IUUC-Ete-033117	Echinops telfairi	53.94	4.00e-42	161.00
IUUC-Eca-033320	Equus caballus	56.36	2.00e-43	166.00
IUUC-Eeu-034817	Erinaceus europaeus	61.36	2.00e-12	61.20
IUUC-Fca-035423	Felis catus	56.36	2.00e-43	166.00
IUUC-Fal-036956	Ficedula albicollis	56.36	2.00e-43	166.00
IUUC-Fox-037761	Fusarium oxysporum	68.03	4.00e-56	208.00
IUUC-Fso-038451	Fusarium solani	66.89	8.00e-56	207.00
IUUC-Gmo-039178	Gadus morhua	56.36	2.00e-43	166.00
IUUC-Ggr-039831	Gaeumannomyces graminis	66.89	1.00e-54	203.00
IUUC-Gga-040238	Gallus gallus	56.36	2.00e-43	166.00
IUUC-Gac-041965	Gasterosteus aculeatus	56.36	2.00e-43	166.00
IUUC-Gma-043062	Glycine max	52.56	5.00e-33	131.00
IUUC-Ggo-045025	Gorilla gorilla	56.36	2.00e-43	166.00
IUUC-Hsa-046875	Homo sapiens	56.36	2.00e-43	166.00
IUUC-Hvu-047497	Hordeum vulgare	50.00	1.00e-34	136.00
IUUC-Itr-047900	Ictidomys tridecemlineatus	55.15	8.00e-43	164.00
IUUC-Kpa-049138	Komagataella pastoris	56.99	1.00e-52	196.00
IUUC-Lch-050522	Latimeria chalumnae	55.21	5.00e-46	174.00
IUUC-Lpe-050697	Leersia perrieri	49.36	9.00e-39	150.00
IUUC-Loc-052596	Lepisosteus oculatus	56.36	2.00e-43	166.00
IUUC-Lma-053020	Leptosphaeria maculans	65.03	1.00e-45	173.00
IUUC-Laf-053847	Loxodonta africana	56.36	2.00e-43	166.00
IUUC-Mor-057176	Magnaporthe oryzae	66.22	1.00e-54	202.00
IUUC-Mpo-057471	Magnaporthe poae	66.89	9.00e-55	203.00
IUUC-Mtr-058458	Medicago truncatula	45.51	8.00e-38	147.00
IUUC-Mla-059153	Melampsora laricipopulina	70.89	2.00e-61	225.00
IUUC-Mga-059864	Meleagris gallopavo	56.36	2.00e-43	166.00
IUUC-Mvi-060342	Microbotryum violaceum	68.75	6.00e-63	230.00
IUUC-Mdo-062509	Monodelphis domestica	56.36	2.00e-43	166.00
IUUC-Mmu-063694	Mus musculus	56.36	2.00e-43	166.00
IUUC-Mac-064509	Musa acuminata	51.28	7.00e-37	144.00
IUUC-Mpu-065990	Mustela putorius furo	56.36	2.00e-43	166.00
IUUC-Mlu-068168	Myotis lucifugus	56.36	2.00e-43	166.00
IUUC-Nfi-068309	Neosartorya fischeri	70.81	3.00e-63	231.00
IUUC-Ncr-068658	Neurospora crassa	68.24	2.00e-56	209.00
IUUC-Nle-070101	Nomascus leucogenys	56.36	2.00e-43	166.00
IUUC-Opr-070881	Ochotona princeps	56.36	2.00e-43	166.00
IUUC-Ont-071529	Oreochromis niloticus	56.36	2.00e-43	166.00
IUUC-Oan-073000	Ornithorhynchus anatinus	72.41	4.00e-23	96.70
IUUC-Ocu-073780	Oryctolagus cuniculus	56.36	2.00e-43	166.00
IUUC-Oba-075110	Oryza barthii	45.81	2.00e-34	136.00
IUUC-Obr-076261	Oryza brachyantha	40.88	9.00e-34	133.00
IUUC-Ogl-077257	Oryza glaberrima	50.32	3.00e-38	148.00
IUUC-Ogu-078813	Oryza glumaepatula	48.08	6.00e-35	137.00
IUUC-Oin-080141	Oryza indica	50.32	3.00e-38	148.00
IUUC-Olo-080834	Oryza longistaminata	39.49	5.00e-32	127.00
IUUC-Ome-081330	Oryza meridionalis	43.64	1.00e-31	127.00
IUUC-Oni-082067	Oryza nivara	50.34	1.00e-35	140.00
IUUC-Opu-083927	Oryza punctata	48.39	1.00e-31	126.00
IUUC-Oru-084769	Oryza rufipogon	45.81	7.00e-35	137.00
IUUC-Osa-085479	Oryza sativa	45.81	7.00e-35	137.00
IUUC-Ola-087270	Oryzias latipes	56.36	2.00e-43	166.00
IUUC-Olu-087667	Ostreococcus lucimarinus	52.20	4.00e-42	161.00
IUUC-Oga-089073	Otolemur garnettii	56.36	2.00e-43	166.00
IUUC-Oar-089391	Ovis aries	52.80	4.00e-38	148.00
IUUC-Ptr-090872	Pan troglodytes	54.27	1.00e-41	159.00
IUUC-Pan-091780	Papio anubis	56.36	2.00e-43	166.00
IUUC-Psi-093135	Pelodiscus sinensis	56.36	2.00e-43	166.00
IUUC-Pno-094810	Phaeosphaeria nodorum	61.11	1.00e-44	169.00
IUUC-Ppa-095244	Physcomitrella patens	55.13	4.00e-41	158.00
IUUC-Pfo-097529	Poecilia formosa	56.36	2.00e-43	166.00
IUUC-Pab-098533	Pongo abelii	56.36	2.00e-43	166.00
IUUC-Pop-099815	Populus trichocarpa	49.36	1.00e-36	143.00
IUUC-Pca-100783	Procavia capensis	46.06	8.00e-33	130.00
IUUC-Ppe-101410	Prunus persica	49.37	1.00e-40	156.00
IUUC-Pva-102901	Pteropus vampyrus	56.36	2.00e-43	166.00
IUUC-Pgr-103499	Puccinia graminis	67.72	1.00e-59	219.00
IUUC-Ptt-103874	Puccinia triticina	70.77	4.00e-52	195.00
IUUC-Pte-104224	Pyrenophora teres	62.94	1.00e-40	156.00
IUUC-Pyt-104750	Pyrenophora triticirepentis	62.94	2.00e-40	156.00
IUUC-Rno-105499	Rattus norvegicus	56.36	2.00e-43	166.00
IUUC-Sce-106387	Saccharomyces cerevisiae	48.97	1.00e-48	183.00
IUUC-Spo-108033	Schizosaccharomyces pombe	86.34	6.00e-84	300.00
IUUC-Ssl-108591	Sclerotinia sclerotiorum	67.12	5.00e-55	204.00
IUUC-Smo-109307	Selaginella moellendorffii	52.87	3.00e-40	155.00
IUUC-Sit-110435	Setaria italica	49.06	3.00e-32	128.00
IUUC-Sly-111529	Solanum lycopersicum	51.27	2.00e-35	139.00
IUUC-Stu-112023	Solanum tuberosum	52.26	9.00e-36	140.00
IUUC-Sar-112973	Sorex araneus	51.52	2.00e-35	139.00
IUUC-Sbi-114666	Sorghum bicolor	50.31	2.00e-35	139.00
IUUC-Sre-115178	Sporisorium reilianum	69.62	5.00e-64	234.00
IUUC-Tgu-116474	Taeniopygia guttata	56.36	2.00e-43	166.00
IUUC-Tru-118429	Takifugu rubripes	56.36	2.00e-43	166.00
IUUC-Tsy-118896	Tarsius syrichta	56.36	2.00e-43	166.00
IUUC-Tni-119960	Tetraodon nigroviridis	56.36	2.00e-43	166.00
IUUC-Tca-121022	Theobroma cacao	53.85	1.00e-36	143.00
IUUC-Tre-122004	Trichoderma reesei	63.70	8.00e-50	187.00
IUUC-Tvi-122449	Trichoderma virens	63.70	2.00e-49	186.00
IUUC-Tae-125068	Triticum aestivum	49.10	3.00e-40	155.00
IUUC-Tur-126200	Triticum urartu	50.64	4.00e-39	151.00
IUUC-Tme-127078	Tuber melanosporum	71.43	1.00e-60	223.00
IUUC-Tbe-127720	Tupaia belangeri	56.36	2.00e-43	166.00
IUUC-Ttr-129035	Tursiops truncatus	56.36	2.00e-43	166.00
IUUC-Uma-129517	Ustilago maydis	69.62	1.00e-62	229.00
IUUC-Vda-129691	Verticillium dahliae	63.76	9.00e-51	190.00
IUUC-Vpa-130128	Vicugna pacos	55.76	2.00e-43	166.00
IUUC-Vvi-130876	Vitis vinifera	51.61	9.00e-42	160.00
IUUC-Xtr-132393	Xenopus tropicalis	56.36	2.00e-43	166.00
IUUC-Xma-133603	Xiphophorus maculatus	56.36	2.00e-43	166.00
IUUC-Yli-134499	Yarrowia lipolytica	67.08	9.00e-59	216.00
IUUC-Zma-134722	Zea mays	46.11	9.00e-34	134.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence