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Tag Content
iUUCD ID IUUC-Sbi-114200
Ensembl Protein ID Sb02g025740.1
UniProt Accession A0A1B6QCQ9; A0A1B6QCQ9_SORBI
Genbank Protein ID KXG35707.1
Protein Name Chlorophyll a-b binding protein, chloroplastic
Genbank Nucleotide ID CM000761
Gene Name SORBI_002G215000
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g025740 Sb02g025740.1 Sb02g025740.1
Sb02g025740 Sb02g025740.2 Sb02g025740.2
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 28.57 2.70e+00 30.40 IUUC-Hsa-045838
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Sorghum bicolor
Functional Description
(View)

Functional Description


     The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
Protein Sequence
(Fasta)
MALPSAGSFA ACSLQPSRVS IRACHAPRPP PHLQPGAAAA VSSARTRQQR RANATKGGVS 60
TVCEPLGPDR PVWFPGKPAP PWLDGSLPGD FGFDPLGLGS DPESLRWFAQ AELMHGRWAM 120
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Protein Fasta Sequence


>IUUC-Sbi-114200|E3,RING|Sorghum bicolor
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Nucleotide Sequence
(Fasta)
CTCATCGGCT GGCTTTTCCG CTTACACATG CCACGCCCTC TCCCTCCCTA TCCTCAAAGA 60
CCAATCCGAT ATCCGATAAA AAGCGCGCAC CGGCGTGGCG CGCTTCCTCC CGAGCCCCGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-114200|E3,RING|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0148--Chlorophyll
KW-0150--Chloroplast
KW-0157--Chromophore
KW-0181--Complete proteome
KW-0472--Membrane
KW-0602--Photosynthesis
KW-0603--Photosystem I
KW-0604--Photosystem II
KW-0934--Plastid
KW-1185--Reference proteome
KW-0793--Thylakoid
KW-0812--Transmembrane
KW-1133--Transmembrane helix
Interpro

IPR001344--Chloro_AB-bd_pln
IPR022796--Chloroa_b-bind
IPR023329--Chlorophyll_a/b-bd_dom
Pfam

PF00504--Chloroa_b-bind
Gene Ontology

GO:0009535--C:chloroplast thylakoid membrane
GO:0016021--C:integral component of membrane
GO:0009522--C:photosystem I
GO:0009523--C:photosystem II
GO:0016168--F:chlorophyll binding
GO:0009765--P:photosynthesis, light harvesting
GO:0018298--P:protein-chromophore linkage
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001453 Ailuropoda melanoleuca 29.87 5.40e-02 31.20
IUUC-Aca-004232 Anolis carolinensis 31.75 7.10e-02 30.80
IUUC-Ani-009409 Aspergillus nidulans 45.00 4.20e-01 28.50
IUUC-Ame-011632 Astyanax mexicanus 30.77 2.50e-02 32.30
IUUC-Bta-012385 Bos taurus 29.87 3.80e-02 32.00
IUUC-Cja-019254 Callithrix jacchus 28.57 8.40e-02 30.80
IUUC-Cpo-021812 Cavia porcellus 29.87 4.70e-02 31.60
IUUC-Csa-024149 Chlorocebus sabaeus 28.57 8.30e-02 30.80
IUUC-Cho-025068 Choloepus hoffmanni 27.27 1.30e-01 29.60
IUUC-Dre-027746 Danio rerio 32.05 1.10e-02 33.90
IUUC-Dno-029620 Dasypus novemcinctus 28.57 7.60e-02 30.80
IUUC-Ete-032925 Echinops telfairi 27.27 2.10e-01 29.30
IUUC-Eeu-034920 Erinaceus europaeus 28.57 7.60e-02 30.80
IUUC-Fal-037288 Ficedula albicollis 31.75 2.00e-01 29.30
IUUC-Gga-040983 Gallus gallus 31.75 1.80e-01 29.60
IUUC-Gac-041781 Gasterosteus aculeatus 30.16 2.00e-01 29.60
IUUC-Ggo-045497 Gorilla gorilla 28.57 7.90e-02 30.80
IUUC-Hsa-045838 Homo sapiens 28.57 8.30e-02 30.80
IUUC-Itr-048810 Ictidomys tridecemlineatus 28.57 8.20e-02 30.80
IUUC-Loc-052256 Lepisosteus oculatus 30.16 2.40e-01 29.30
IUUC-Laf-054201 Loxodonta africana 27.27 2.10e-01 29.30
IUUC-Mcc-054979 Macaca mulatta 28.57 7.50e-02 30.80
IUUC-Mga-059681 Meleagris gallopavo 31.75 1.60e-01 29.60
IUUC-Mmr-060621 Microcebus murinus 28.57 6.50e-02 30.80
IUUC-Mdo-063039 Monodelphis domestica 27.27 1.60e-01 29.60
IUUC-Mmu-063345 Mus musculus 28.57 9.50e-02 30.40
IUUC-Mpu-065710 Mustela putorius furo 28.57 9.20e-02 30.80
IUUC-Nle-069775 Nomascus leucogenys 28.57 7.90e-02 30.80
IUUC-Ont-071567 Oreochromis niloticus 26.37 2.00e-02 32.70
IUUC-Oan-073059 Ornithorhynchus anatinus 27.27 2.30e-01 29.30
IUUC-Ola-087060 Oryzias latipes 28.00 2.30e-01 29.30
IUUC-Oga-087942 Otolemur garnettii 28.57 1.00e-01 30.40
IUUC-Oar-090103 Ovis aries 32.00 6.10e-02 31.20
IUUC-Ptr-091160 Pan troglodytes 28.57 8.50e-02 30.80
IUUC-Pan-091744 Papio anubis 28.57 8.50e-02 30.80
IUUC-Psi-093246 Pelodiscus sinensis 31.75 7.60e-02 31.20
IUUC-Ppa-095577 Physcomitrella patens 64.71 1.00e-72 265.00
IUUC-Pab-097719 Pongo abelii 28.57 8.20e-02 30.80
IUUC-Pca-100285 Procavia capensis 27.27 1.60e-01 29.60
IUUC-Pva-102764 Pteropus vampyrus 28.57 9.60e-02 30.40
IUUC-Rno-104901 Rattus norvegicus 28.57 1.10e-01 30.40
IUUC-Sha-107581 Sarcophilus harrisii 27.27 1.20e-01 30.00
IUUC-Smo-108823 Selaginella moellendorffii 37.91 1.00e-28 119.00
IUUC-Ssc-116145 Sus scrofa 29.87 3.90e-02 32.00
IUUC-Tru-118750 Takifugu rubripes 25.97 2.80e-01 28.90
IUUC-Tbe-127954 Tupaia belangeri 28.57 7.60e-02 30.80
IUUC-Ttr-129271 Tursiops truncatus 29.87 4.20e-02 31.60
IUUC-Vpa-130078 Vicugna pacos 27.27 1.90e-01 29.60
IUUC-Vvi-130966 Vitis vinifera 36.36 1.00e-28 119.00
Created Date 25-Jun-2017

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