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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108283
UUCD1 version UUC-ScP-00204
Ensembl Protein ID SPBP19A11.06.1:pep
UniProt Accession Q9HDV4; Q9P7E6; LID2_SCHPO
Genbank Protein ID CAC19756.1
Protein Name Lid2 complex component lid2
Genbank Nucleotide ID CU329671
Gene Name lid2; SPBP19A11.06; SPBP4H10.01
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPBP19A11.06 SPBP19A11.06.1 SPBP19A11.06.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexHINTMentha
Post-translational Modifications (PTMs)
dbPAFdbPTMUniProt
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 8.40e-22 75.2 1098 1143
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C +C+ ++++   ++eCe+C+ew+H++Clk+s +++l+++ek++Cp C+
   Q: 1098 FC-FCRLPESG--VMIECEICHEWYHAKCLKMS-KKKLRQDEKFTCPICD 1143
           46.66666665..5*******************.***************7 PP
   
Organism Schizosaccharomyces pombe
Protein Sequence
(Fasta)
MICQLLWHEH NSMGSGREKK IRKLGDNFSL PYLKFDCDHN DKNYRASNRP FGLSTGLSVQ 60
LNASNMTDPF KFLLDNWHTI FKNGAIKLLP PEGWQIPVVL DQGAFEFQSK RQCLNKGCLN 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108283|E3,PHD|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGTATATTGA TTATGCACTT TTCCGTTTTC CATGATATGC CAGCTTTTGT GGCACGAACA 60
TAATTCTATG GGATCAGGAA GAGAGAAGAA AATAAGAAAG CTAGGAGATA ACTTTTCATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108283|E3,PHD|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF01388--ARID
PF02373--JmjC
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2
SMART

SM00558--JmjC
SM00249--PHD
Gene Ontology

GO:0048189--C:Lid2 complex
GO:0031934--C:mating-type region heterochromatin
GO:0031618--C:nuclear pericentric heterochromatin
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0034647--F:histone demethylase activity (H3-trimethyl-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding
GO:0030702--P:chromatin silencing at centromere
GO:0030466--P:chromatin silencing at silent mating-type cassette
GO:0031507--P:heterochromatin assembly
GO:0051567--P:histone H3-K9 methylation
GO:0000070--P:mitotic sister chromatid segregation
GO:0051572--P:negative regulation of histone H3-K4 methylation
GO:0034630--P:RITS complex localization
GO:0006351--P:transcription, DNA-templated
KEGG spo:SPBP19A11.06
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000552 Aegilops tauschii 21.65 1.00e-30 127.00
IUUC-Aml-002061 Ailuropoda melanoleuca 23.92 8.00e-44 171.00
IUUC-Atr-002595 Amborella trichopoda 25.56 2.00e-35 143.00
IUUC-Apl-004141 Anas platyrhynchos 22.99 1.00e-55 210.00
IUUC-Aca-004952 Anolis carolinensis 22.63 1.00e-54 207.00
IUUC-Aly-006097 Arabidopsis lyrata 62.50 8.00e-09 55.50
IUUC-Ath-007218 Arabidopsis thaliana 62.50 1.00e-08 54.70
IUUC-Acl-008162 Aspergillus clavatus 31.38 9.00e-163 566.00
IUUC-Afl-008625 Aspergillus flavus 31.74 3.00e-157 548.00
IUUC-Afu-008796 Aspergillus fumigatus 32.61 2.00e-160 558.00
IUUC-Ani-009139 Aspergillus nidulans 31.73 1.00e-153 536.00
IUUC-Aor-010155 Aspergillus oryzae 31.74 3.00e-157 548.00
IUUC-Ate-010453 Aspergillus terreus 31.22 2.00e-157 548.00
IUUC-Ame-011323 Astyanax mexicanus 24.04 2.00e-58 219.00
IUUC-Bgr-012241 Blumeria graminis 30.92 5.00e-149 520.00
IUUC-Bta-012902 Bos taurus 23.34 3.00e-53 202.00
IUUC-Bci-013992 Botrytis cinerea 30.21 8.00e-142 496.00
IUUC-Bdi-014050 Brachypodium distachyon 23.48 4.00e-38 152.00
IUUC-Bol-015336 Brassica oleracea 55.56 1.00e-13 71.20
IUUC-Bra-017998 Brassica rapa 28.41 1.00e-13 71.20
IUUC-Cja-018988 Callithrix jacchus 24.04 5.00e-44 172.00
IUUC-Cfa-020954 Canis familiaris 23.85 1.00e-30 127.00
IUUC-Cpo-022340 Cavia porcellus 20.88 1.00e-36 147.00
IUUC-Cre-022637 Chlamydomonas reinhardtii 55.56 8.00e-08 45.80
IUUC-Csa-023575 Chlorocebus sabaeus 24.05 8.00e-44 171.00
IUUC-Cho-024280 Choloepus hoffmanni 25.95 8.00e-40 157.00
IUUC-Cin-025321 Ciona intestinalis 23.22 8.00e-55 207.00
IUUC-Csv-026185 Ciona savignyi 21.30 5.00e-42 165.00
IUUC-Cgl-026613 Colletotrichum gloeosporioides 31.15 2.00e-147 515.00
IUUC-Cne-026851 Cryptococcus neoformans 24.68 3.00e-81 295.00
IUUC-Dre-027909 Danio rerio 22.08 3.00e-50 191.00
IUUC-Dno-029473 Dasypus novemcinctus 25.81 2.00e-40 160.00
IUUC-Dor-030226 Dipodomys ordii 20.15 2.00e-25 109.00
IUUC-Dse-031479 Dothistroma septosporum 31.62 2.00e-160 558.00
IUUC-Dme-032021 Drosophila melanogaster 24.00 1.00e-39 157.00
IUUC-Ete-033144 Echinops telfairi 53.33 9.00e-12 64.70
IUUC-Eca-034265 Equus caballus 24.05 2.00e-44 173.00
IUUC-Eeu-034692 Erinaceus europaeus 21.01 4.00e-38 152.00
IUUC-Fca-035476 Felis catus 23.92 7.00e-44 171.00
IUUC-Fal-037078 Ficedula albicollis 22.86 7.00e-54 204.00
IUUC-Fso-038127 Fusarium solani 29.59 3.00e-143 501.00
IUUC-Gmo-039140 Gadus morhua 21.28 1.00e-36 147.00
IUUC-Ggr-039929 Gaeumannomyces graminis 31.71 2.00e-144 505.00
IUUC-Gga-040466 Gallus gallus 23.08 3.00e-55 209.00
IUUC-Gac-042566 Gasterosteus aculeatus 24.16 4.00e-44 172.00
IUUC-Gma-042675 Glycine max 23.46 4.00e-32 132.00
IUUC-Ggo-044524 Gorilla gorilla 24.05 2.00e-42 166.00
IUUC-Hsa-045821 Homo sapiens 24.04 7.00e-44 171.00
IUUC-Hvu-047583 Hordeum vulgare 41.89 5.00e-14 71.60
IUUC-Itr-048348 Ictidomys tridecemlineatus 23.85 2.00e-30 126.00
IUUC-Kpa-049245 Komagataella pastoris 21.31 2.00e-37 149.00
IUUC-Lch-050517 Latimeria chalumnae 22.34 8.00e-42 164.00
IUUC-Lpe-051537 Leersia perrieri 21.39 2.00e-30 126.00
IUUC-Loc-051963 Lepisosteus oculatus 25.39 9.00e-41 160.00
IUUC-Laf-053761 Loxodonta africana 21.26 6.00e-38 151.00
IUUC-Mcc-055672 Macaca mulatta 24.05 1.00e-43 171.00
IUUC-Meu-056643 Macropus eugenii 21.30 2.00e-38 153.00
IUUC-Mor-057198 Magnaporthe oryzae 32.19 3.00e-149 521.00
IUUC-Mpo-057317 Magnaporthe poae 31.20 4.00e-145 507.00
IUUC-Mtr-058113 Medicago truncatula 23.02 3.00e-28 119.00
IUUC-Mga-059358 Meleagris gallopavo 21.07 1.00e-39 157.00
IUUC-Mvi-060436 Microbotryum violaceum 42.55 3.00e-09 55.10
IUUC-Mmr-060968 Microcebus murinus 22.88 5.00e-53 201.00
IUUC-Mdo-062945 Monodelphis domestica 22.73 9.00e-54 204.00
IUUC-Mmu-063614 Mus musculus 22.91 1.00e-54 206.00
IUUC-Mac-065069 Musa acuminata 53.33 1.00e-05 44.70
IUUC-Mpu-066349 Mustela putorius furo 23.92 6.00e-44 171.00
IUUC-Mlu-067363 Myotis lucifugus 23.75 5.00e-55 208.00
IUUC-Nfi-068430 Neosartorya fischeri 31.62 4.00e-158 551.00
IUUC-Ncr-068763 Neurospora crassa 30.87 3.00e-142 498.00
IUUC-Nle-070142 Nomascus leucogenys 24.04 9.00e-44 171.00
IUUC-Opr-071002 Ochotona princeps 23.02 3.00e-20 93.20
IUUC-Ont-072471 Oreochromis niloticus 23.79 2.00e-55 209.00
IUUC-Oan-073160 Ornithorhynchus anatinus 21.87 2.00e-41 162.00
IUUC-Ocu-074164 Oryctolagus cuniculus 23.38 9.00e-44 171.00
IUUC-Oba-075388 Oryza barthii 24.64 6.00e-29 122.00
IUUC-Obr-076296 Oryza brachyantha 23.37 3.00e-24 106.00
IUUC-Ogl-077886 Oryza glaberrima 51.11 2.00e-13 69.70
IUUC-Ogu-079040 Oryza glumaepatula 24.64 6.00e-29 121.00
IUUC-Oin-079273 Oryza indica 48.89 1.00e-11 60.80
IUUC-Olo-080668 Oryza longistaminata 51.11 3.00e-13 69.70
IUUC-Ome-081764 Oryza meridionalis 24.85 8.00e-34 138.00
IUUC-Oni-083012 Oryza nivara 24.64 6.00e-29 121.00
IUUC-Opu-083164 Oryza punctata 23.08 3.00e-29 122.00
IUUC-Oru-084630 Oryza rufipogon 24.84 2.00e-29 123.00
IUUC-Osa-085487 Oryza sativa 51.11 2.00e-13 69.30
IUUC-Ola-087076 Oryzias latipes 22.59 1.00e-45 177.00
IUUC-Oga-088350 Otolemur garnettii 23.70 1.00e-43 171.00
IUUC-Oar-090045 Ovis aries 23.02 7.00e-53 201.00
IUUC-Ptr-091199 Pan troglodytes 24.04 1.00e-43 171.00
IUUC-Pan-092094 Papio anubis 23.90 3.00e-55 209.00
IUUC-Psi-093550 Pelodiscus sinensis 23.83 5.00e-41 161.00
IUUC-Pma-094137 Petromyzon marinus 23.95 2.00e-37 149.00
IUUC-Pno-094879 Phaeosphaeria nodorum 32.20 3.00e-158 551.00
IUUC-Ppa-095646 Physcomitrella patens 46.43 3.00e-13 69.70
IUUC-Pfo-097266 Poecilia formosa 23.82 5.00e-52 198.00
IUUC-Pab-098576 Pongo abelii 24.04 1.00e-43 170.00
IUUC-Pop-099061 Populus trichocarpa 44.83 5.00e-05 39.70
IUUC-Pca-100446 Procavia capensis 23.85 8.00e-31 127.00
IUUC-Ppe-101504 Prunus persica 25.56 1.00e-33 137.00
IUUC-Pva-103109 Pteropus vampyrus 23.11 2.00e-42 166.00
IUUC-Pgr-103434 Puccinia graminis 54.17 2.00e-14 71.60
IUUC-Pte-104195 Pyrenophora teres 33.27 1.00e-164 572.00
IUUC-Pyt-104566 Pyrenophora triticirepentis 33.45 6.00e-166 577.00
IUUC-Rno-105664 Rattus norvegicus 23.46 1.00e-44 174.00
IUUC-Sce-106207 Saccharomyces cerevisiae 23.80 4.00e-29 120.00
IUUC-Sha-107506 Sarcophilus harrisii 22.83 3.00e-54 205.00
IUUC-Sja-107970 Schizosaccharomyces japonicus 44.03 0.00e+00 1226.00
IUUC-Ssl-108489 Sclerotinia sclerotiorum 31.24 7.00e-149 520.00
IUUC-Smo-108843 Selaginella moellendorffii 51.06 2.00e-10 59.30
IUUC-Sit-110534 Setaria italica 21.70 2.00e-35 143.00
IUUC-Sly-111298 Solanum lycopersicum 25.21 3.00e-36 145.00
IUUC-Stu-112523 Solanum tuberosum 39.13 1.00e-09 54.70
IUUC-Sar-113052 Sorex araneus 22.74 6.00e-43 168.00
IUUC-Sbi-113816 Sorghum bicolor 51.11 2.00e-10 59.70
IUUC-Sre-115161 Sporisorium reilianum 24.42 4.00e-69 255.00
IUUC-Ssc-116354 Sus scrofa 23.96 3.00e-30 126.00
IUUC-Tgu-116613 Taeniopygia guttata 21.64 6.00e-45 174.00
IUUC-Tru-118604 Takifugu rubripes 24.66 8.00e-58 217.00
IUUC-Tsy-119237 Tarsius syrichta 27.57 1.00e-30 127.00
IUUC-Tni-120779 Tetraodon nigroviridis 24.00 2.00e-55 209.00
IUUC-Tca-121478 Theobroma cacao 22.27 8.00e-38 151.00
IUUC-Tre-122213 Trichoderma reesei 30.96 1.00e-143 502.00
IUUC-Tvi-122263 Trichoderma virens 30.50 1.00e-137 483.00
IUUC-Tae-125894 Triticum aestivum 21.78 1.00e-34 140.00
IUUC-Tur-126632 Triticum urartu 21.93 2.00e-30 127.00
IUUC-Tme-127087 Tuber melanosporum 34.10 2.00e-173 602.00
IUUC-Tbe-128040 Tupaia belangeri 23.85 1.00e-30 127.00
IUUC-Ttr-129242 Tursiops truncatus 23.90 3.00e-43 169.00
IUUC-Uma-129590 Ustilago maydis 25.00 7.00e-75 275.00
IUUC-Vda-129733 Verticillium dahliae 30.85 2.00e-138 485.00
IUUC-Vpa-130433 Vicugna pacos 23.85 6.00e-31 127.00
IUUC-Vvi-131071 Vitis vinifera 27.48 2.00e-24 106.00
IUUC-Xtr-131762 Xenopus tropicalis 24.93 4.00e-46 179.00
IUUC-Xma-133693 Xiphophorus maculatus 24.17 1.00e-51 197.00
IUUC-Zma-135829 Zea mays 25.00 3.00e-29 122.00
Created Date 25-Jun-2017

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