iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022705

Ensembl Protein ID

EDP05376

UniProt Accession

A8ILK1; CFA52_CHLRE

Genbank Protein ID

EDP05376.1

Protein Name

Cilia- and flagella-associated protein 52

Genbank Nucleotide ID

DS496118

Gene Name

CFAP52; FAP52; CHLREDRAFT_128114

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_128114	EDP05376	EDP05376

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-35	118.4	450	483
UBD/Beta-Prp	1.40e-62	211.1	317	482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           H+++v+c++   s++  vs+s Dg++ +WDl+t+
   Q: 450  HKGPVNCIRIkgSGDECVSASSDGSCILWDLHTF 483
           9**********87799***************997 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk.ghedsvlslsfsp 104
           ++++h + i+ ++f +++s +++++ +g i++w +tt   l ++   + e  ++ f  dg+ +++g +D+ i+ + +++gk++ t++ +h++ v+++++ +
   Q: 317  VQTAHNDKINGMAFPNEYSEVFATCGTGFIRLWHLTTCRELLRIAVPNLECFCIAFTTDGSAILSGWSDGKIRAFGPQSGKIIFTINdAHQKAVTAIASTA 417
           68899********************************9999***99999************************************9989************ PP
   S: 105  sgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlkt 168
           ++++++sG++  ++rvw + +t q le+  + h+g vnc++++++g+ +vs+s D+ + lWdl t
   Q: 418  DSSRILSGGEEGMVRVWRIgRTSQTLEASMKDHKGPVNCIRIKGSGDECVSASSDGSCILWDLHT 482
           ******************956777888899********************************954 PP

Organism

Chlamydomonas reinhardtii

Functional Description
(View)

May play a role in cell growth and/or survival.

Protein Sequence
(Fasta)

MAEPLVLNSV IGFGGAIENG LIAHPDGRTI IYPLGSTIVL RDRADPRSQE FLQGHSDKVS 60
CLALSRSGRY LASGQITYMG FTADIIIWDL ESKQLIHRMA LHKVKVQALD FSCDERFLAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATACACTCT GCATAAATCT CTTCATTAAC GCGAGCATCT TATCTTTTCT ACATTAAACT 60
AGGAGTTTCT TGCCGCTTGC CAAGTCAGGG GCAGGATGGC CGAGCCGCTG GTCCTCAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0966--Cell projection
KW-0969--Cilium
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0282--Flagellum
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR033015--CFAP52
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0031514--C:motile cilium

KEGG

cre:CHLREDRAFT_128114

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002048	Ailuropoda melanoleuca	44.68	1.00e-158	551.00
IUUC-Apl-004011	Anas platyrhynchos	44.76	2.00e-157	546.00
IUUC-Aca-004805	Anolis carolinensis	45.98	4.00e-160	556.00
IUUC-Ame-010655	Astyanax mexicanus	45.80	3.00e-160	556.00
IUUC-Bta-013493	Bos taurus	45.53	9.00e-159	551.00
IUUC-Cja-019923	Callithrix jacchus	45.07	7.00e-158	548.00
IUUC-Cfa-020609	Canis familiaris	44.02	1.00e-154	538.00
IUUC-Cpo-022158	Cavia porcellus	45.18	1.00e-156	544.00
IUUC-Csa-023338	Chlorocebus sabaeus	45.14	2.00e-158	550.00
IUUC-Cho-024884	Choloepus hoffmanni	42.33	1.00e-98	352.00
IUUC-Cin-025634	Ciona intestinalis	47.83	8.00e-172	595.00
IUUC-Csv-026211	Ciona savignyi	47.54	5.00e-69	252.00
IUUC-Dre-028268	Danio rerio	46.24	1.00e-167	581.00
IUUC-Dno-029202	Dasypus novemcinctus	40.93	6.00e-132	462.00
IUUC-Dor-030197	Dipodomys ordii	37.68	2.00e-93	335.00
IUUC-Dme-032037	Drosophila melanogaster	33.90	1.00e-105	375.00
IUUC-Ete-033049	Echinops telfairi	40.60	8.00e-136	475.00
IUUC-Eca-033884	Equus caballus	45.42	1.00e-156	544.00
IUUC-Eeu-034477	Erinaceus europaeus	37.57	6.00e-72	263.00
IUUC-Fca-035453	Felis catus	44.02	5.00e-154	535.00
IUUC-Gmo-039448	Gadus morhua	47.29	4.00e-75	274.00
IUUC-Gga-040295	Gallus gallus	45.47	1.00e-167	581.00
IUUC-Gac-042074	Gasterosteus aculeatus	40.81	5.00e-135	473.00
IUUC-Ggo-044438	Gorilla gorilla	43.69	8.00e-117	412.00
IUUC-Hsa-046794	Homo sapiens	45.63	2.00e-159	553.00
IUUC-Itr-048315	Ictidomys tridecemlineatus	46.69	3.00e-95	339.00
IUUC-Lch-050554	Latimeria chalumnae	46.35	3.00e-155	540.00
IUUC-Loc-052080	Lepisosteus oculatus	46.39	1.00e-165	574.00
IUUC-Laf-054288	Loxodonta africana	44.02	6.00e-153	532.00
IUUC-Mcc-055746	Macaca mulatta	41.02	9.00e-134	468.00
IUUC-Meu-056507	Macropus eugenii	42.25	5.00e-80	290.00
IUUC-Mga-059858	Meleagris gallopavo	45.76	2.00e-154	537.00
IUUC-Mmr-061757	Microcebus murinus	44.49	6.00e-133	465.00
IUUC-Mdo-062670	Monodelphis domestica	43.88	3.00e-159	553.00
IUUC-Mmu-064084	Mus musculus	44.57	1.00e-156	544.00
IUUC-Mpu-066253	Mustela putorius furo	45.24	1.00e-155	541.00
IUUC-Mlu-067944	Myotis lucifugus	39.90	4.00e-125	440.00
IUUC-Nle-069098	Nomascus leucogenys	45.28	2.00e-158	550.00
IUUC-Opr-070525	Ochotona princeps	40.15	2.00e-118	417.00
IUUC-Ont-071609	Oreochromis niloticus	43.46	2.00e-150	523.00
IUUC-Oan-073543	Ornithorhynchus anatinus	45.25	2.00e-158	550.00
IUUC-Ocu-074209	Oryctolagus cuniculus	44.41	4.00e-157	546.00
IUUC-Ola-086464	Oryzias latipes	41.18	6.00e-145	505.00
IUUC-Olu-087600	Ostreococcus lucimarinus	36.15	2.00e-104	371.00
IUUC-Oga-088977	Otolemur garnettii	45.14	2.00e-156	544.00
IUUC-Oar-089192	Ovis aries	45.03	1.00e-156	545.00
IUUC-Ptr-090882	Pan troglodytes	43.87	3.00e-154	536.00
IUUC-Pan-092865	Papio anubis	43.51	5.00e-151	526.00
IUUC-Psi-093270	Pelodiscus sinensis	43.71	9.00e-138	481.00
IUUC-Pma-094291	Petromyzon marinus	46.73	1.00e-170	591.00
IUUC-Ppa-095984	Physcomitrella patens	48.11	2.00e-174	603.00
IUUC-Pfo-097344	Poecilia formosa	40.49	6.00e-143	499.00
IUUC-Pab-098278	Pongo abelii	44.98	5.00e-158	549.00
IUUC-Pca-101037	Procavia capensis	43.96	7.00e-154	535.00
IUUC-Pva-102351	Pteropus vampyrus	42.39	2.00e-123	434.00
IUUC-Pte-104373	Pyrenophora teres	21.77	1.00e-13	70.50
IUUC-Rno-105262	Rattus norvegicus	44.90	2.00e-157	547.00
IUUC-Smo-109009	Selaginella moellendorffii	55.41	0.00e+00	720.00
IUUC-Sar-113156	Sorex araneus	36.45	5.00e-50	190.00
IUUC-Ssc-116319	Sus scrofa	47.11	1.00e-31	126.00
IUUC-Tru-117963	Takifugu rubripes	43.07	1.00e-151	528.00
IUUC-Tsy-119115	Tarsius syrichta	33.05	7.00e-90	322.00
IUUC-Tni-120388	Tetraodon nigroviridis	43.81	2.00e-145	507.00
IUUC-Tbe-127930	Tupaia belangeri	39.68	4.00e-73	267.00
IUUC-Ttr-128981	Tursiops truncatus	44.65	8.00e-149	518.00
IUUC-Vpa-130492	Vicugna pacos	40.47	2.00e-135	474.00
IUUC-Xtr-132142	Xenopus tropicalis	47.94	2.00e-174	603.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence