iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022796

Ensembl Protein ID

EDP01047

UniProt Accession

A8J4D9; A8J4D9_CHLRE

Genbank Protein ID

EDP01047.1

Protein Name

Intraflagellar transport particle protein IFT140

Genbank Nucleotide ID

DS496136

Gene Name

IFT140; CHLREDRAFT_192205

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_192205	EDP01047	EDP01047

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-08	32.9	77	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           H + ++++ +  s+++l++G  +g i +W +
   Q: 77   HRNTISSMTWtaSGDRLITGDENGRISMWKT 107
           8999*******8779**************85 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MQPGAVGTQY LCCWLQGRPL DPNNEANIKN VRGTECAKIA WHPLLPLLAI GWKDGELGAI 60
SFWNAEERKL EEDSKIHRNT ISSMTWTASG DRLITGDENG RISMWKTDRL MRPIHVVAYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGTGCGGC TGTCTGGTTT GAATGCAGCC GGGGGCAGTT GGTACTCAGT ACTTGTGTTG 60
CTGGCTGCAG GGCCGCCCGC TGGACCCTAA TAACGAGGCA AACATAAAAA ACGTTCGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0966--Cell projection
KW-0969--Cilium
KW-0181--Complete proteome
KW-0282--Flagellum
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0036064--C:ciliary basal body
GO:0030991--C:intraciliary transport particle A
GO:0031514--C:motile cilium
GO:0060271--P:cilium assembly
GO:0035721--P:intraciliary retrograde transport

KEGG

cre:CHLREDRAFT_192205

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001534	Ailuropoda melanoleuca	33.78	0.00e+00	716.00
IUUC-Apl-004045	Anas platyrhynchos	24.57	3.00e-51	194.00
IUUC-Aca-004856	Anolis carolinensis	33.85	0.00e+00	759.00
IUUC-Bta-013342	Bos taurus	34.19	0.00e+00	708.00
IUUC-Cel-018591	Caenorhabditis elegans	22.27	9.00e-09	54.70
IUUC-Cja-019368	Callithrix jacchus	22.94	4.00e-23	100.00
IUUC-Cfa-020359	Canis familiaris	23.98	2.00e-08	54.30
IUUC-Cpo-021608	Cavia porcellus	22.76	2.00e-13	70.10
IUUC-Csa-023417	Chlorocebus sabaeus	34.52	0.00e+00	716.00
IUUC-Cin-025150	Ciona intestinalis	33.26	0.00e+00	750.00
IUUC-Csv-025810	Ciona savignyi	21.41	5.00e-17	80.90
IUUC-Dre-027680	Danio rerio	33.69	0.00e+00	763.00
IUUC-Dno-029782	Dasypus novemcinctus	24.76	2.00e-09	57.00
IUUC-Eca-033444	Equus caballus	34.83	0.00e+00	776.00
IUUC-Fca-036025	Felis catus	33.78	0.00e+00	709.00
IUUC-Gmo-038491	Gadus morhua	35.43	0.00e+00	736.00
IUUC-Gac-041476	Gasterosteus aculeatus	22.74	5.00e-14	72.40
IUUC-Loc-052740	Lepisosteus oculatus	35.15	0.00e+00	803.00
IUUC-Laf-054242	Loxodonta africana	25.00	3.00e-10	60.10
IUUC-Mcc-055460	Macaca mulatta	25.00	7.00e-11	62.00
IUUC-Meu-056864	Macropus eugenii	21.21	4.00e-07	49.70
IUUC-Mga-060030	Meleagris gallopavo	23.43	3.00e-15	76.60
IUUC-Mmr-060951	Microcebus murinus	21.46	8.00e-10	58.50
IUUC-Mdo-062290	Monodelphis domestica	23.98	1.00e-07	51.60
IUUC-Mpu-065874	Mustela putorius furo	34.24	0.00e+00	721.00
IUUC-Mlu-067077	Myotis lucifugus	34.85	0.00e+00	769.00
IUUC-Opr-070642	Ochotona princeps	25.00	2.00e-09	57.00
IUUC-Ont-072303	Oreochromis niloticus	32.69	0.00e+00	736.00
IUUC-Ocu-073906	Oryctolagus cuniculus	22.32	3.00e-15	75.90
IUUC-Ola-086338	Oryzias latipes	33.04	0.00e+00	703.00
IUUC-Ptr-090583	Pan troglodytes	34.19	0.00e+00	734.00
IUUC-Pan-092689	Papio anubis	34.73	0.00e+00	717.00
IUUC-Psi-093824	Pelodiscus sinensis	34.78	0.00e+00	786.00
IUUC-Pma-094497	Petromyzon marinus	34.71	0.00e+00	815.00
IUUC-Pfo-096612	Poecilia formosa	33.43	0.00e+00	692.00
IUUC-Pva-102236	Pteropus vampyrus	46.65	2.00e-179	622.00
IUUC-Rno-105208	Rattus norvegicus	22.18	3.00e-14	72.80
IUUC-Sha-106814	Sarcophilus harrisii	34.35	0.00e+00	768.00
IUUC-Tru-118007	Takifugu rubripes	34.04	0.00e+00	766.00
IUUC-Ttr-128400	Tursiops truncatus	44.48	4.00e-150	524.00
IUUC-Vpa-130651	Vicugna pacos	23.08	7.00e-09	55.10
IUUC-Xtr-131918	Xenopus tropicalis	31.56	0.00e+00	659.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence