iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135157

UUCD1 version

UUC-ZeM-00639

Ensembl Protein ID

Zm00001d006079_T001

UniProt Accession

A0A1D6ESQ1; A0A1D6ESQ1_MAIZE

Genbank Protein ID

ONM22737.1

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM007648

Gene Name

ZEAMMB73_Zm00001d006079

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d006079	Zm00001d006079_T001	Zm00001d006079_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	9.40e-69	234.2	219	671

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgye 88
           +Gl NlgNtC++N+vLQ+++++  lr+ +l           p+ p+g+l++sl+klf+e    ++  +  sp++l+++++++ ++f+gy+
   Q: 219  KGLPNLGNTCFFNAVLQSILAVDRLRRKMLG----------PDVPTGALAMSLKKLFAETSasNHAGGMLSPKNLFSSICSKYPQFRGYQ 298
           59*****************************..........345789*************97788888********************** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
            qD++E+l+++ld+l+ e                 +e+ + aee  +   +++++ +F+gql+s++   ec ++s+++++fldlslpvp+
   Q: 299  MQDSHELLRCFLDGLRMEE----------------TEARKLAEEASDAGVPTIVDSIFGGQLSSTVSSTECSHSSVKHDQFLDLSLPVPS 372
           ****************999................2344556778999*****************************************9 PP
   S: 179  keetkke................................................................................... 185
           ++   k+                                                                                   
   Q: 373  RRPPTKSvssppvkrtkqsirdrnknrrygkvparaspsvesnkeqvhsiaernsqipgseleqvvsekdaepsgcsescgsvpnqeqna 462
           9988777999******************************************************************************** PP
   S: 186  .......................................................................................... 185
                                                                                                     
   Q: 463  ttnvensicwldyvadadetkseildsadstetgqiwecrdaahgplhpqddalpkeqilgsehsgentvdddaslqtvillpykefgtt 552
           ****************************************************************************************** PP
   S: 186  .......................................................................................... 185
                                                                                                     
   Q: 553  akerdeaienpynsectvpplvvspvrenntqpeycgdveqddyvglgdmfnepevtsevkkeagkvedidvmawssnsaddevddsnap 642
           ****************************************************************************************** PP
   S: 186  .slqdcLesftkeeelegenkyycekckkkq 215
            s++ cL+ +t++e l   + + ce+c++  
   Q: 643  vSVEGCLAVYTEPELLS--EPWLCEHCTNAA 671
           ****************8..59******9655 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGKNEKAKRK NPRKAHERDL PASSSEVGPG DAASQDASHS AEEAAASANG REHCGHYGRD 60
NAHLDKVLLE ILSSKHVASC EHCREDAPRK KGGAGSREKG GKQKKKGGAS KGATAKAQAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTGACCGAG CGAGAATCGG AGAGCCCTTT CGGCTTTGGC TCTTTTAGTA GAAGTAGAGA 60
TACTCAGGTT CAGTTCAGCA CGCGTGCGCT GTCTCCCTCT CTCTTCGCGA CGACTGTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

zma:103647570

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000997	Aegilops tauschii	65.68	0.00e+00	1198.00
IUUC-Aml-001931	Ailuropoda melanoleuca	31.64	7.00e-33	135.00
IUUC-Atr-003015	Amborella trichopoda	32.12	3.00e-67	249.00
IUUC-Apl-004145	Anas platyrhynchos	28.57	1.00e-30	127.00
IUUC-Aca-004314	Anolis carolinensis	29.70	4.00e-26	112.00
IUUC-Aly-005494	Arabidopsis lyrata	30.08	4.00e-54	206.00
IUUC-Ath-007211	Arabidopsis thaliana	39.78	5.00e-51	196.00
IUUC-Ame-011659	Astyanax mexicanus	35.10	4.00e-26	113.00
IUUC-Bta-013362	Bos taurus	30.32	4.00e-32	132.00
IUUC-Bdi-014465	Brachypodium distachyon	64.14	0.00e+00	1181.00
IUUC-Bol-015191	Brassica oleracea	31.53	1.00e-61	231.00
IUUC-Bra-017226	Brassica rapa	31.59	9.00e-61	228.00
IUUC-Cja-019177	Callithrix jacchus	31.10	5.00e-34	139.00
IUUC-Cfa-020051	Canis familiaris	31.59	2.00e-32	133.00
IUUC-Cpo-021886	Cavia porcellus	31.40	1.00e-32	134.00
IUUC-Csa-024103	Chlorocebus sabaeus	31.10	1.00e-33	137.00
IUUC-Cho-024315	Choloepus hoffmanni	42.86	1.00e-19	91.30
IUUC-Cin-025775	Ciona intestinalis	32.62	2.00e-16	77.40
IUUC-Csv-026075	Ciona savignyi	32.41	6.00e-19	88.60
IUUC-Cme-027348	Cyanidioschyzon merolae	34.56	1.00e-17	84.30
IUUC-Dre-028388	Danio rerio	35.53	3.00e-28	120.00
IUUC-Dno-029409	Dasypus novemcinctus	31.16	3.00e-32	133.00
IUUC-Dor-030443	Dipodomys ordii	40.00	5.00e-25	109.00
IUUC-Ete-032807	Echinops telfairi	40.67	1.00e-25	110.00
IUUC-Eca-033479	Equus caballus	31.49	8.00e-34	138.00
IUUC-Eeu-034835	Erinaceus europaeus	38.71	7.00e-25	108.00
IUUC-Fca-036320	Felis catus	31.58	1.00e-34	141.00
IUUC-Fal-037029	Ficedula albicollis	29.81	5.00e-31	129.00
IUUC-Gmo-039480	Gadus morhua	27.16	5.00e-28	119.00
IUUC-Gga-040527	Gallus gallus	27.27	5.00e-28	119.00
IUUC-Gac-042343	Gasterosteus aculeatus	35.15	3.00e-27	116.00
IUUC-Gma-044402	Glycine max	30.76	1.00e-76	281.00
IUUC-Ggo-045598	Gorilla gorilla	30.81	2.00e-32	134.00
IUUC-Hsa-046598	Homo sapiens	30.57	1.00e-32	134.00
IUUC-Hvu-047146	Hordeum vulgare	65.31	0.00e+00	1201.00
IUUC-Itr-047951	Ictidomys tridecemlineatus	31.20	1.00e-34	141.00
IUUC-Lch-050536	Latimeria chalumnae	29.82	9.00e-30	125.00
IUUC-Lpe-050703	Leersia perrieri	63.86	0.00e+00	1219.00
IUUC-Loc-051814	Lepisosteus oculatus	28.86	2.00e-31	130.00
IUUC-Laf-053732	Loxodonta africana	30.55	4.00e-34	139.00
IUUC-Mcc-054661	Macaca mulatta	31.10	2.00e-33	137.00
IUUC-Meu-055967	Macropus eugenii	27.27	5.00e-22	99.40
IUUC-Mtr-057945	Medicago truncatula	40.00	9.00e-54	205.00
IUUC-Mga-059551	Meleagris gallopavo	27.59	9.00e-31	128.00
IUUC-Mvi-060391	Microbotryum violaceum	33.91	3.00e-18	87.00
IUUC-Mmr-061747	Microcebus murinus	31.49	6.00e-34	139.00
IUUC-Mdo-062220	Monodelphis domestica	30.15	2.00e-30	127.00
IUUC-Mmu-063582	Mus musculus	29.94	3.00e-30	126.00
IUUC-Mac-064941	Musa acuminata	38.03	2.00e-112	399.00
IUUC-Mpu-066339	Mustela putorius furo	31.34	6.00e-33	135.00
IUUC-Mlu-067511	Myotis lucifugus	31.20	4.00e-33	136.00
IUUC-Nle-069252	Nomascus leucogenys	31.10	2.00e-33	137.00
IUUC-Opr-070969	Ochotona princeps	37.67	8.00e-31	128.00
IUUC-Ont-071786	Oreochromis niloticus	35.03	8.00e-27	115.00
IUUC-Oan-073656	Ornithorhynchus anatinus	30.38	5.00e-29	122.00
IUUC-Ocu-074704	Oryctolagus cuniculus	31.10	3.00e-33	136.00
IUUC-Oba-075094	Oryza barthii	66.30	0.00e+00	1280.00
IUUC-Obr-076743	Oryza brachyantha	65.92	0.00e+00	1222.00
IUUC-Ogl-077739	Oryza glaberrima	64.12	0.00e+00	1019.00
IUUC-Ogu-078851	Oryza glumaepatula	66.30	0.00e+00	1280.00
IUUC-Oin-079402	Oryza indica	68.24	0.00e+00	1281.00
IUUC-Olo-080431	Oryza longistaminata	67.51	0.00e+00	1236.00
IUUC-Ome-081580	Oryza meridionalis	66.14	0.00e+00	1280.00
IUUC-Oni-082644	Oryza nivara	66.33	0.00e+00	1282.00
IUUC-Opu-083452	Oryza punctata	65.24	0.00e+00	1274.00
IUUC-Oru-084546	Oryza rufipogon	66.57	0.00e+00	1281.00
IUUC-Osa-085858	Oryza sativa	66.30	0.00e+00	1279.00
IUUC-Ola-086795	Oryzias latipes	26.63	5.00e-28	119.00
IUUC-Oga-088713	Otolemur garnettii	31.21	1.00e-33	137.00
IUUC-Oar-089971	Ovis aries	30.52	2.00e-32	134.00
IUUC-Ptr-091670	Pan troglodytes	30.81	8.00e-33	135.00
IUUC-Pan-092293	Papio anubis	31.10	2.00e-33	137.00
IUUC-Psi-093101	Pelodiscus sinensis	29.65	6.00e-29	122.00
IUUC-Ppa-095584	Physcomitrella patens	29.00	6.00e-39	156.00
IUUC-Pfo-097202	Poecilia formosa	28.57	8.00e-30	125.00
IUUC-Pab-098773	Pongo abelii	36.73	4.00e-31	129.00
IUUC-Pop-099588	Populus trichocarpa	30.33	1.00e-62	234.00
IUUC-Pca-101069	Procavia capensis	34.59	4.00e-25	109.00
IUUC-Ppe-101794	Prunus persica	32.29	2.00e-65	243.00
IUUC-Pva-103092	Pteropus vampyrus	39.35	5.00e-25	109.00
IUUC-Rno-105237	Rattus norvegicus	28.98	5.00e-30	125.00
IUUC-Sha-106889	Sarcophilus harrisii	30.89	5.00e-30	125.00
IUUC-Sja-107712	Schizosaccharomyces japonicus	33.55	1.00e-18	88.20
IUUC-Spo-108149	Schizosaccharomyces pombe	40.54	2.00e-24	107.00
IUUC-Sit-110283	Setaria italica	81.09	0.00e+00	1657.00
IUUC-Sly-111487	Solanum lycopersicum	30.28	3.00e-69	256.00
IUUC-Stu-112499	Solanum tuberosum	31.24	7.00e-76	278.00
IUUC-Sar-113530	Sorex araneus	31.34	9.00e-34	138.00
IUUC-Sbi-113785	Sorghum bicolor	89.40	0.00e+00	1725.00
IUUC-Sre-114910	Sporisorium reilianum	29.11	3.00e-11	63.20
IUUC-Ssc-116091	Sus scrofa	30.29	2.00e-32	134.00
IUUC-Tgu-117478	Taeniopygia guttata	30.34	4.00e-32	132.00
IUUC-Tru-118640	Takifugu rubripes	28.53	2.00e-28	120.00
IUUC-Tsy-118869	Tarsius syrichta	32.31	2.00e-24	107.00
IUUC-Tni-120015	Tetraodon nigroviridis	36.04	3.00e-28	119.00
IUUC-Tca-121701	Theobroma cacao	31.76	2.00e-68	253.00
IUUC-Tae-125785	Triticum aestivum	66.60	0.00e+00	1184.00
IUUC-Tur-126788	Triticum urartu	65.74	0.00e+00	1053.00
IUUC-Tbe-128041	Tupaia belangeri	34.95	6.00e-24	105.00
IUUC-Ttr-128271	Tursiops truncatus	31.03	1.00e-34	140.00
IUUC-Vpa-130674	Vicugna pacos	31.40	2.00e-34	140.00
IUUC-Xtr-131869	Xenopus tropicalis	30.79	8.00e-29	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence