iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107378

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01080497

Gene Name

TBL3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000015266.1	ENSSHAT00000018130.1	ENSSHAP00000017981.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-57	188.6	527	566
UBD/Beta-Prp	2.80e-100	335.5	423	647

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  +v+c++f +    l++ s Dg++k+W+l ++ +lk+
   Q: 527  GHRRGVWCVQFsPMdQVLATTSADGSLKLWSLQDFSCLKT 566
           8**********977789********************986 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgk.ilvtgseDrtikvwdls.................tgkcvhtlkghedsvlslsfspsgdklvsGshdrti 118
            sgh+ ++ ++++s+ ++ +lvtgs+D t+k+w+l                    +   t ++h++++ s+++sp+++ l+sGs+drt+
   Q: 423  GSGHTHGIGTISCSRLKEaFLVTGSQDCTVKLWPLPeavtskkmtrdpscdpiPLQAQATQRAHDKDINSVAVSPNDKLLASGSQDRTA 511
           57899998888888877679999999999999954445555555555545444555556666999999999999999999999999999 PP
   S: 119  rvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvkl 206
           ++w l+  + l  ++sgh++ v+cv+++p +++l++ s+D+ ++lW+l+  ++l+t++g h+ sv  ++f s g + l s + dg +kl
   Q: 512  KLWSLPDFSLLG-VFSGHRRGVWCVQFSPMDQVLATTSADGSLKLWSLQDFSCLKTFEG-HDASVLRVTFVSRGtQLLSSSGSDGLLKL 598
           999999999999.9999999999999999999999999999999999999999999999.99999999988877456666779999999 PP
   S: 207  wdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsg 254
           w ++t+ecvrtl gh+d v+ ++  ++de +v+g+sD  i +W d++  
   Q: 599  WTIKTNECVRTLDGHEDKVWGLHCNRQDEEVVTGASDARILLWkDVTET 647
           9999999999999999999999999999999999999999999755443 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MAETAGTRAR GLSFKSNYVV QRRIEPFYKG GKVQASGDGQ LLFCVCGSGV NVVDATSGSL 60
VRTLQQEDQE NITTFDLSPN NEILVTGSRA LLLTQWAWRE GNVTRVWKAI HTAPVASMAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGAGA CTGCCGGCAC ACGCGCCCGC GGGTTGAGCT TCAAGAGCAA GTGAGGGGCC 60
TATTGGGAAC AAGCCAGGAA GGGTCTCTGG CGGAGCTCGG GGCTGAGGAG CGGGGAGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	37.50	9.00e-155	540.00
IUUC-Aml-002376	Ailuropoda melanoleuca	74.07	0.00e+00	1192.00
IUUC-Atr-002486	Amborella trichopoda	38.01	6.00e-163	568.00
IUUC-Apl-003519	Anas platyrhynchos	62.47	0.00e+00	925.00
IUUC-Aca-004363	Anolis carolinensis	57.60	2.00e-153	535.00
IUUC-Aly-006152	Arabidopsis lyrata	36.87	5.00e-156	545.00
IUUC-Ath-006966	Arabidopsis thaliana	36.77	1.00e-155	543.00
IUUC-Ago-007746	Ashbya gossypii	29.41	1.00e-103	370.00
IUUC-Acl-008009	Aspergillus clavatus	28.33	5.00e-106	379.00
IUUC-Afl-008681	Aspergillus flavus	28.03	3.00e-95	343.00
IUUC-Afu-008798	Aspergillus fumigatus	28.50	3.00e-98	353.00
IUUC-Ani-009278	Aspergillus nidulans	28.36	1.00e-99	357.00
IUUC-Ang-009640	Aspergillus niger	29.53	3.00e-104	372.00
IUUC-Aor-010160	Aspergillus oryzae	28.14	1.00e-94	341.00
IUUC-Ate-010320	Aspergillus terreus	28.56	2.00e-106	380.00
IUUC-Ame-010930	Astyanax mexicanus	58.21	8.00e-74	269.00
IUUC-Bgr-012054	Blumeria graminis	29.28	1.00e-99	357.00
IUUC-Bta-012611	Bos taurus	74.06	0.00e+00	1180.00
IUUC-Bci-013797	Botrytis cinerea	29.02	2.00e-106	379.00
IUUC-Bdi-014384	Brachypodium distachyon	39.15	2.00e-168	585.00
IUUC-Bol-015097	Brassica oleracea	37.55	3.00e-155	542.00
IUUC-Bra-017798	Brassica rapa	37.79	5.00e-157	548.00
IUUC-Cel-018664	Caenorhabditis elegans	31.84	2.00e-125	443.00
IUUC-Cja-019092	Callithrix jacchus	73.85	0.00e+00	1212.00
IUUC-Cfa-021040	Canis familiaris	72.13	0.00e+00	1180.00
IUUC-Cpo-022529	Cavia porcellus	74.57	0.00e+00	1199.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	59.26	4.00e-46	176.00
IUUC-Csa-024205	Chlorocebus sabaeus	73.82	0.00e+00	1211.00
IUUC-Cin-025560	Ciona intestinalis	46.37	0.00e+00	738.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	30.88	6.00e-114	405.00
IUUC-Cne-027082	Cryptococcus neoformans	30.15	3.00e-114	406.00
IUUC-Cme-027159	Cyanidioschyzon merolae	25.09	5.00e-34	140.00
IUUC-Dre-028138	Danio rerio	53.56	0.00e+00	893.00
IUUC-Dno-029914	Dasypus novemcinctus	64.16	0.00e+00	829.00
IUUC-Dor-030685	Dipodomys ordii	65.48	0.00e+00	799.00
IUUC-Dse-031429	Dothistroma septosporum	28.71	8.00e-97	348.00
IUUC-Dme-031995	Drosophila melanogaster	32.97	1.00e-118	420.00
IUUC-Ete-033086	Echinops telfairi	76.60	0.00e+00	680.00
IUUC-Eca-034354	Equus caballus	75.41	0.00e+00	1185.00
IUUC-Eeu-034832	Erinaceus europaeus	76.67	0.00e+00	706.00
IUUC-Fca-036136	Felis catus	69.76	0.00e+00	1123.00
IUUC-Fal-036859	Ficedula albicollis	64.64	0.00e+00	1058.00
IUUC-Fox-037863	Fusarium oxysporum	30.65	4.00e-101	362.00
IUUC-Fso-038389	Fusarium solani	30.79	2.00e-111	396.00
IUUC-Gmo-038711	Gadus morhua	57.09	0.00e+00	900.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.69	8.00e-105	375.00
IUUC-Gga-040263	Gallus gallus	65.22	0.00e+00	1094.00
IUUC-Gac-041291	Gasterosteus aculeatus	61.23	0.00e+00	1036.00
IUUC-Gma-044026	Glycine max	38.70	7.00e-170	590.00
IUUC-Ggo-044693	Gorilla gorilla	73.95	0.00e+00	1184.00
IUUC-Hsa-046048	Homo sapiens	74.07	0.00e+00	1186.00
IUUC-Hvu-047608	Hordeum vulgare	39.12	1.00e-169	590.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	74.06	0.00e+00	1216.00
IUUC-Kpa-049209	Komagataella pastoris	31.70	4.00e-115	408.00
IUUC-Lch-050085	Latimeria chalumnae	63.74	0.00e+00	1022.00
IUUC-Lpe-050945	Leersia perrieri	39.04	2.00e-164	573.00
IUUC-Loc-052679	Lepisosteus oculatus	64.54	0.00e+00	1084.00
IUUC-Laf-053685	Loxodonta africana	72.17	0.00e+00	1127.00
IUUC-Mcc-055861	Macaca mulatta	74.10	0.00e+00	1188.00
IUUC-Meu-056820	Macropus eugenii	85.02	0.00e+00	1164.00
IUUC-Mor-057234	Magnaporthe oryzae	27.68	1.00e-99	357.00
IUUC-Mpo-057456	Magnaporthe poae	30.58	5.00e-85	308.00
IUUC-Mtr-058122	Medicago truncatula	39.47	2.00e-171	596.00
IUUC-Mla-058980	Melampsora laricipopulina	28.16	5.00e-95	342.00
IUUC-Mga-060080	Meleagris gallopavo	65.76	0.00e+00	1095.00
IUUC-Mvi-060338	Microbotryum violaceum	35.88	2.00e-144	506.00
IUUC-Mmr-060762	Microcebus murinus	74.81	0.00e+00	1184.00
IUUC-Mdo-061975	Monodelphis domestica	89.60	0.00e+00	1405.00
IUUC-Mmu-064038	Mus musculus	73.47	0.00e+00	1173.00
IUUC-Mac-065189	Musa acuminata	36.52	3.00e-163	569.00
IUUC-Mpu-066526	Mustela putorius furo	72.68	0.00e+00	1156.00
IUUC-Mlu-067716	Myotis lucifugus	74.66	0.00e+00	1267.00
IUUC-Nfi-068474	Neosartorya fischeri	28.78	2.00e-99	357.00
IUUC-Ncr-068826	Neurospora crassa	26.73	3.00e-91	330.00
IUUC-Nle-069832	Nomascus leucogenys	73.85	0.00e+00	1213.00
IUUC-Opr-071183	Ochotona princeps	72.91	0.00e+00	1124.00
IUUC-Ont-072371	Oreochromis niloticus	62.62	0.00e+00	1025.00
IUUC-Oan-073491	Ornithorhynchus anatinus	65.71	0.00e+00	960.00
IUUC-Oba-075963	Oryza barthii	38.55	3.00e-165	575.00
IUUC-Obr-076173	Oryza brachyantha	40.00	5.00e-165	574.00
IUUC-Ogl-077692	Oryza glaberrima	38.67	2.00e-165	575.00
IUUC-Ogu-078965	Oryza glumaepatula	38.55	4.00e-165	575.00
IUUC-Oin-079708	Oryza indica	38.55	8.00e-166	577.00
IUUC-Olo-080679	Oryza longistaminata	38.42	1.00e-164	573.00
IUUC-Oni-082960	Oryza nivara	38.55	6.00e-166	578.00
IUUC-Opu-083282	Oryza punctata	38.29	4.00e-160	558.00
IUUC-Oru-085224	Oryza rufipogon	38.55	3.00e-165	575.00
IUUC-Osa-085320	Oryza sativa	38.55	3.00e-165	575.00
IUUC-Ola-086370	Oryzias latipes	46.15	7.00e-135	474.00
IUUC-Olu-087814	Ostreococcus lucimarinus	31.37	1.00e-99	357.00
IUUC-Oga-088458	Otolemur garnettii	73.70	0.00e+00	1256.00
IUUC-Oar-090032	Ovis aries	67.60	0.00e+00	844.00
IUUC-Ptr-090749	Pan troglodytes	73.57	0.00e+00	1172.00
IUUC-Pan-091691	Papio anubis	71.71	0.00e+00	1130.00
IUUC-Psi-093200	Pelodiscus sinensis	65.57	0.00e+00	1073.00
IUUC-Pma-094165	Petromyzon marinus	52.19	0.00e+00	655.00
IUUC-Pno-095048	Phaeosphaeria nodorum	30.23	2.00e-87	316.00
IUUC-Ppa-095336	Physcomitrella patens	40.76	2.00e-167	583.00
IUUC-Pfo-096132	Poecilia formosa	61.01	0.00e+00	979.00
IUUC-Pab-097855	Pongo abelii	73.85	0.00e+00	1207.00
IUUC-Pop-099434	Populus trichocarpa	36.44	1.00e-158	553.00
IUUC-Pca-100232	Procavia capensis	66.87	3.00e-137	482.00
IUUC-Ppe-101665	Prunus persica	38.90	3.00e-166	578.00
IUUC-Pva-102178	Pteropus vampyrus	74.81	0.00e+00	1204.00
IUUC-Pgr-103288	Puccinia graminis	26.48	4.00e-85	309.00
IUUC-Ptt-103808	Puccinia triticina	30.87	9.00e-82	298.00
IUUC-Pte-104205	Pyrenophora teres	30.13	4.00e-103	369.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	29.03	2.00e-94	340.00
IUUC-Rno-105617	Rattus norvegicus	73.81	0.00e+00	1181.00
IUUC-Sce-106281	Saccharomyces cerevisiae	31.50	2.00e-111	396.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.00	7.00e-124	437.00
IUUC-Spo-108361	Schizosaccharomyces pombe	31.34	2.00e-115	410.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	29.39	5.00e-111	395.00
IUUC-Smo-109632	Selaginella moellendorffii	38.81	8.00e-165	573.00
IUUC-Sit-110258	Setaria italica	38.75	5.00e-171	594.00
IUUC-Sly-111521	Solanum lycopersicum	36.95	7.00e-157	547.00
IUUC-Stu-112718	Solanum tuberosum	46.81	2.00e-33	134.00
IUUC-Sar-113586	Sorex araneus	62.22	2.00e-52	199.00
IUUC-Sbi-114768	Sorghum bicolor	38.57	8.00e-172	597.00
IUUC-Sre-115159	Sporisorium reilianum	33.46	8.00e-92	332.00
IUUC-Ssc-116342	Sus scrofa	55.85	0.00e+00	763.00
IUUC-Tgu-117320	Taeniopygia guttata	63.71	0.00e+00	1004.00
IUUC-Tru-118024	Takifugu rubripes	60.31	0.00e+00	986.00
IUUC-Tni-119971	Tetraodon nigroviridis	61.15	0.00e+00	986.00
IUUC-Tca-121248	Theobroma cacao	38.14	3.00e-164	572.00
IUUC-Tre-122079	Trichoderma reesei	29.99	7.00e-105	375.00
IUUC-Tvi-122554	Trichoderma virens	30.14	9.00e-103	367.00
IUUC-Tae-125845	Triticum aestivum	39.85	4.00e-173	602.00
IUUC-Tur-126436	Triticum urartu	37.96	7.00e-139	487.00
IUUC-Tme-126942	Tuber melanosporum	31.66	4.00e-107	382.00
IUUC-Tbe-128000	Tupaia belangeri	74.39	1.00e-71	264.00
IUUC-Ttr-128964	Tursiops truncatus	71.38	0.00e+00	1161.00
IUUC-Uma-129473	Ustilago maydis	32.20	4.00e-105	376.00
IUUC-Vda-129749	Verticillium dahliae	29.22	1.00e-97	350.00
IUUC-Vvi-131511	Vitis vinifera	38.15	4.00e-161	561.00
IUUC-Xtr-132816	Xenopus tropicalis	56.70	0.00e+00	912.00
IUUC-Xma-133672	Xiphophorus maculatus	60.89	0.00e+00	1014.00
IUUC-Yli-134602	Yarrowia lipolytica	35.89	1.00e-141	496.00
IUUC-Zma-135559	Zea mays	37.49	2.00e-163	569.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence