iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074226

Ensembl Protein ID

ENSOCUP00000008203.2

UniProt Accession

G1SXC8; G1SXC8_RABIT

Protein Name

Uncharacterized protein

Gene Name

NXF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000009503.2	ENSOCUT00000009509.2	ENSOCUP00000008203.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	26.06	9.00e-16	80.10	IUUC-Sce-106429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MADEGKSYNV EYDDRVSFPQ RRKKGRGPFR WKYGESNRRS GRGGSGIRSS RLEEDDGDVA 60
MSDAQDGPRV RYTPYAARPN RRGDTWHGRE RIHVTVRRDR APLERGGAGT SQDGTSKNWF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGATG AGGGGAAGTC GTACAACGGT CAGTGCTGGA TCTCGTGTGT GGAGCGGACG 60
ATCTGGGGCC CGGGTGGGCG GCGCCGGCCT AGGCCGCAGC TCGGGGCGAG AGGCCGCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR002075--NTF2
IPR032710--NTF2-like_dom
IPR018222--Nuclear_transport_factor_2_euk
IPR012677--Nucleotide-bd_a/b_plait
IPR030217--NXF_fam
IPR000504--RRM_dom
IPR005637--TAP_C_dom
IPR015245--Tap_RNA-bd
IPR009060--UBA-like

PROSITE

PS51450--LRR
PS50177--NTF2_DOMAIN
PS51281--TAP_C

Pfam

PF02136--NTF2
PF09162--Tap-RNA_bind
PF03943--TAP_C

SMART

SM00804--TAP_C

Gene Ontology

GO:0005737--C:cytoplasm
GO:0042405--C:nuclear inclusion body
GO:0005643--C:nuclear pore
GO:0016607--C:nuclear speck
GO:0000346--C:transcription export complex
GO:0003729--F:mRNA binding
GO:0005487--F:nucleocytoplasmic transporter activity
GO:0000166--F:nucleotide binding
GO:0003727--F:single-stranded RNA binding
GO:0016973--P:poly(A)+ mRNA export from nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001516	Ailuropoda melanoleuca	90.62	0.00e+00	1063.00
IUUC-Apl-003526	Anas platyrhynchos	35.35	7.00e-04	37.40
IUUC-Aca-005187	Anolis carolinensis	67.01	0.00e+00	748.00
IUUC-Ago-007780	Ashbya gossypii	23.47	1.00e-18	88.20
IUUC-Acl-008191	Aspergillus clavatus	26.18	2.00e-25	110.00
IUUC-Afl-008512	Aspergillus flavus	27.19	1.00e-28	121.00
IUUC-Afu-009048	Aspergillus fumigatus	26.24	4.00e-27	116.00
IUUC-Ani-009320	Aspergillus nidulans	22.92	6.00e-19	89.40
IUUC-Ang-009834	Aspergillus niger	25.21	6.00e-22	99.00
IUUC-Aor-010039	Aspergillus oryzae	26.75	3.00e-25	110.00
IUUC-Ate-010321	Aspergillus terreus	25.64	4.00e-22	99.80
IUUC-Ame-011034	Astyanax mexicanus	58.54	0.00e+00	650.00
IUUC-Bgr-012142	Blumeria graminis	25.81	1.00e-18	88.20
IUUC-Bta-013268	Bos taurus	91.63	0.00e+00	1055.00
IUUC-Bci-013951	Botrytis cinerea	27.39	3.00e-22	100.00
IUUC-Cel-018213	Caenorhabditis elegans	34.83	4.00e-03	35.00
IUUC-Cja-019064	Callithrix jacchus	93.38	0.00e+00	1084.00
IUUC-Cfa-020712	Canis familiaris	91.19	0.00e+00	1031.00
IUUC-Cpo-021814	Cavia porcellus	92.73	0.00e+00	1078.00
IUUC-Csa-023652	Chlorocebus sabaeus	93.86	0.00e+00	1094.00
IUUC-Cho-024546	Choloepus hoffmanni	63.64	2.00e-03	36.20
IUUC-Cin-025669	Ciona intestinalis	35.10	1.00e-95	343.00
IUUC-Csv-025957	Ciona savignyi	35.79	6.00e-88	317.00
IUUC-Cgl-026395	Colletotrichum gloeosporioides	27.00	3.00e-27	116.00
IUUC-Cne-026967	Cryptococcus neoformans	21.29	2.00e-04	40.40
IUUC-Dre-028476	Danio rerio	54.09	2.00e-153	535.00
IUUC-Dno-029301	Dasypus novemcinctus	90.79	0.00e+00	1043.00
IUUC-Dor-030764	Dipodomys ordii	91.77	0.00e+00	1077.00
IUUC-Dse-031489	Dothistroma septosporum	24.66	1.00e-17	84.70
IUUC-Dme-031623	Drosophila melanogaster	33.00	7.00e-81	295.00
IUUC-Ete-032992	Echinops telfairi	77.71	0.00e+00	802.00
IUUC-Eca-033208	Equus caballus	92.13	0.00e+00	1013.00
IUUC-Eeu-034759	Erinaceus europaeus	89.50	0.00e+00	1045.00
IUUC-Fca-035671	Felis catus	93.05	0.00e+00	1078.00
IUUC-Fox-037892	Fusarium oxysporum	28.23	8.00e-22	98.60
IUUC-Fso-038402	Fusarium solani	27.70	8.00e-21	95.50
IUUC-Gmo-039325	Gadus morhua	55.56	2.00e-151	529.00
IUUC-Ggr-039736	Gaeumannomyces graminis	24.08	2.00e-12	67.80
IUUC-Gga-040508	Gallus gallus	70.91	0.00e+00	794.00
IUUC-Gac-041798	Gasterosteus aculeatus	57.35	0.00e+00	694.00
IUUC-Ggo-044655	Gorilla gorilla	93.60	0.00e+00	1061.00
IUUC-Hsa-047028	Homo sapiens	94.02	0.00e+00	1095.00
IUUC-Itr-048415	Ictidomys tridecemlineatus	89.52	0.00e+00	1056.00
IUUC-Kpa-049280	Komagataella pastoris	23.82	1.00e-21	98.20
IUUC-Lch-049501	Latimeria chalumnae	70.65	0.00e+00	843.00
IUUC-Loc-052299	Lepisosteus oculatus	64.14	2.00e-173	601.00
IUUC-Laf-053523	Loxodonta africana	90.79	0.00e+00	1061.00
IUUC-Mcc-055389	Macaca mulatta	94.81	0.00e+00	1021.00
IUUC-Meu-056620	Macropus eugenii	57.21	9.00e-142	496.00
IUUC-Mor-057232	Magnaporthe oryzae	27.98	6.00e-29	122.00
IUUC-Mpo-057539	Magnaporthe poae	23.96	1.00e-10	61.60
IUUC-Mla-059053	Melampsora laricipopulina	26.12	4.00e-27	116.00
IUUC-Mga-059220	Meleagris gallopavo	35.35	8.00e-04	37.40
IUUC-Mvi-060283	Microbotryum violaceum	25.25	3.00e-21	96.70
IUUC-Mmr-061583	Microcebus murinus	94.67	0.00e+00	1103.00
IUUC-Mdo-062158	Monodelphis domestica	80.58	0.00e+00	958.00
IUUC-Mmu-064202	Mus musculus	88.85	0.00e+00	1011.00
IUUC-Mpu-065730	Mustela putorius furo	92.25	0.00e+00	1070.00
IUUC-Mlu-066975	Myotis lucifugus	90.48	0.00e+00	1013.00
IUUC-Nfi-068368	Neosartorya fischeri	24.53	9.00e-27	115.00
IUUC-Ncr-068724	Neurospora crassa	26.44	5.00e-17	82.80
IUUC-Nle-069816	Nomascus leucogenys	93.70	0.00e+00	1087.00
IUUC-Opr-070244	Ochotona princeps	42.01	3.00e-125	442.00
IUUC-Ont-072608	Oreochromis niloticus	58.95	0.00e+00	717.00
IUUC-Oan-073580	Ornithorhynchus anatinus	35.40	4.00e-04	38.50
IUUC-Ola-087008	Oryzias latipes	65.01	0.00e+00	684.00
IUUC-Oga-088317	Otolemur garnettii	89.87	0.00e+00	1006.00
IUUC-Oar-089720	Ovis aries	91.30	0.00e+00	1026.00
IUUC-Ptr-091148	Pan troglodytes	94.02	0.00e+00	1095.00
IUUC-Pan-091764	Papio anubis	93.86	0.00e+00	1093.00
IUUC-Psi-094071	Pelodiscus sinensis	65.71	0.00e+00	796.00
IUUC-Pno-095045	Phaeosphaeria nodorum	25.61	8.00e-05	41.20
IUUC-Pfo-096500	Poecilia formosa	60.57	0.00e+00	732.00
IUUC-Pab-098014	Pongo abelii	92.08	0.00e+00	1083.00
IUUC-Pca-100121	Procavia capensis	89.82	0.00e+00	1014.00
IUUC-Pva-102865	Pteropus vampyrus	92.57	0.00e+00	1026.00
IUUC-Pgr-103333	Puccinia graminis	24.90	7.00e-18	85.50
IUUC-Ptt-103702	Puccinia triticina	24.45	3.00e-21	97.10
IUUC-Pte-104388	Pyrenophora teres	24.54	6.00e-04	38.10
IUUC-Rno-106100	Rattus norvegicus	90.47	0.00e+00	1038.00
IUUC-Sce-106429	Saccharomyces cerevisiae	23.03	4.00e-16	79.30
IUUC-Sha-106834	Sarcophilus harrisii	81.26	0.00e+00	975.00
IUUC-Sja-107818	Schizosaccharomyces japonicus	27.78	5.00e-22	99.40
IUUC-Spo-108301	Schizosaccharomyces pombe	28.07	1.00e-35	144.00
IUUC-Ssl-108512	Sclerotinia sclerotiorum	25.88	1.00e-21	98.20
IUUC-Sar-112963	Sorex araneus	43.71	8.00e-126	443.00
IUUC-Sre-114950	Sporisorium reilianum	23.25	3.00e-21	96.70
IUUC-Ssc-116010	Sus scrofa	91.63	0.00e+00	1011.00
IUUC-Tgu-116603	Taeniopygia guttata	35.35	1.00e-03	37.00
IUUC-Tru-118148	Takifugu rubripes	58.97	0.00e+00	694.00
IUUC-Tsy-119506	Tarsius syrichta	38.14	7.00e-06	43.90
IUUC-Tni-120552	Tetraodon nigroviridis	33.33	2.00e-03	36.20
IUUC-Tre-121894	Trichoderma reesei	26.21	1.00e-26	114.00
IUUC-Tvi-122501	Trichoderma virens	27.47	2.00e-30	127.00
IUUC-Tme-127084	Tuber melanosporum	25.54	7.00e-27	115.00
IUUC-Tbe-127980	Tupaia belangeri	64.20	3.00e-91	328.00
IUUC-Ttr-128656	Tursiops truncatus	57.00	0.00e+00	675.00
IUUC-Uma-129530	Ustilago maydis	24.05	8.00e-27	115.00
IUUC-Vda-129709	Verticillium dahliae	25.34	5.00e-21	95.90
IUUC-Vpa-130739	Vicugna pacos	46.57	1.00e-105	376.00
IUUC-Xtr-132404	Xenopus tropicalis	60.90	0.00e+00	748.00
IUUC-Xma-133051	Xiphophorus maculatus	59.21	0.00e+00	707.00
IUUC-Yli-134681	Yarrowia lipolytica	25.81	2.00e-32	133.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence