iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tgu-116750

Ensembl Protein ID

ENSTGUP00000000671.1

UniProt Accession

H0YQW4; H0YQW4_TAEGU

Genbank Protein ID

ENSTGUP00000000671

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01047310

Gene Name

MED16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000000660.1	ENSTGUT00000000682.1	ENSTGUP00000000671.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-06	28.1	70	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           gHt+ +tcl++  s+ +l+s+  Dg ik+W ++++
   Q: 70   GHTEVITCLEWdqSGSRLLSADADGHIKCWGMTDH 104
           8**********965599*************99875 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

GGMELAYVCE WEKKPKSNHC PSIPLVCAWS CRNSSPFTTD LRNEEEKDLT HMVHIIDTEH 60
PWDVYSVNSG HTEVITCLEW DQSGSRLLSA DADGHIKCWG MTDHLANSWE NTVGSVVEGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGGGATGG AACTGGCCTA CGTGTGCGAG TGGGAGAAGA AACCCAAGAG CAACCACTGC 60
CCCTCCATCC CGCTGGTGTG CGCCTGGTCC TGCCGCAACT CATCGCCTTT CACCACGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021665--Mediator_Med16
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11635--Med16

SMART

SM00320--WD40

Gene Ontology

GO:0016592--C:mediator complex
GO:0016020--C:membrane
GO:0004872--F:receptor activity
GO:0030375--F:thyroid hormone receptor coactivator activity
GO:0030521--P:androgen receptor signaling pathway
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0006367--P:transcription initiation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011407	Astyanax mexicanus	74.76	0.00e+00	1250.00
IUUC-Bta-012729	Bos taurus	82.79	0.00e+00	1425.00
IUUC-Cja-019000	Callithrix jacchus	79.49	5.00e-83	300.00
IUUC-Cfa-020876	Canis familiaris	85.16	0.00e+00	1472.00
IUUC-Cpo-021655	Cavia porcellus	84.22	0.00e+00	1436.00
IUUC-Dre-027473	Danio rerio	77.57	0.00e+00	1329.00
IUUC-Dno-029564	Dasypus novemcinctus	84.34	0.00e+00	1000.00
IUUC-Eca-033914	Equus caballus	85.77	0.00e+00	855.00
IUUC-Fca-036338	Felis catus	86.23	0.00e+00	783.00
IUUC-Fal-037249	Ficedula albicollis	99.28	0.00e+00	1699.00
IUUC-Gmo-039447	Gadus morhua	73.08	3.00e-172	598.00
IUUC-Gga-041100	Gallus gallus	96.69	0.00e+00	1573.00
IUUC-Gac-042603	Gasterosteus aculeatus	61.45	0.00e+00	996.00
IUUC-Ggo-044794	Gorilla gorilla	85.78	0.00e+00	1096.00
IUUC-Hsa-045722	Homo sapiens	84.82	0.00e+00	770.00
IUUC-Itr-048948	Ictidomys tridecemlineatus	83.86	0.00e+00	1448.00
IUUC-Loc-052871	Lepisosteus oculatus	80.94	0.00e+00	1364.00
IUUC-Mcc-055201	Macaca mulatta	85.94	0.00e+00	1095.00
IUUC-Mga-059807	Meleagris gallopavo	91.62	0.00e+00	1540.00
IUUC-Mmr-060781	Microcebus murinus	83.96	0.00e+00	1467.00
IUUC-Mpu-066388	Mustela putorius furo	84.42	0.00e+00	1453.00
IUUC-Ont-072316	Oreochromis niloticus	78.00	0.00e+00	1316.00
IUUC-Ola-086721	Oryzias latipes	75.99	0.00e+00	1270.00
IUUC-Oga-088875	Otolemur garnettii	86.08	0.00e+00	1463.00
IUUC-Oar-090444	Ovis aries	84.48	0.00e+00	1459.00
IUUC-Ptr-091117	Pan troglodytes	81.24	0.00e+00	756.00
IUUC-Pan-091807	Papio anubis	84.30	0.00e+00	1369.00
IUUC-Pfo-097356	Poecilia formosa	78.00	0.00e+00	1322.00
IUUC-Pab-097953	Pongo abelii	83.54	0.00e+00	1059.00
IUUC-Pca-100896	Procavia capensis	84.31	0.00e+00	1424.00
IUUC-Rno-105038	Rattus norvegicus	84.01	0.00e+00	1443.00
IUUC-Tru-118405	Takifugu rubripes	77.74	0.00e+00	1339.00
IUUC-Tni-120217	Tetraodon nigroviridis	80.29	0.00e+00	1035.00
IUUC-Ttr-129222	Tursiops truncatus	83.86	0.00e+00	1402.00
IUUC-Xtr-132084	Xenopus tropicalis	83.75	0.00e+00	1377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence